FFCP PHASE1:Hg19::chr16:89580747..89580750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89580747..89580750,+ | |||
|description=CAGE_peak_at_chr16:89580747..89580750,+ | |description=CAGE_peak_at_chr16:89580747..89580750,+ | ||
|id=chr16:89580747..89580750,+ | |id=chr16:89580747..89580750,+ | ||
|ontology_enrichment_celltype=CL:0000322;1.17e-08;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000322;1.17e-08;3 | ||
|ontology_enrichment_disease=DOID:3151;2.93e-23;1!DOID:3149;2.93e-23;1!DOID:3451;2.45e-12;2!DOID:4159;2.45e-12;2!DOID:0060122;2.45e-12;2!DOID:3910;2.45e-12;2 | |ontology_enrichment_celltype_v019_2=CL:0000322,1.12e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0004903;2.45e-12;2!UBERON:0002173;2.45e-12;2!UBERON:0002186;2.45e-12;2!UBERON:0004821;1.17e-08;3!UBERON:0007499;1.17e-08;3!UBERON:0003215;1.17e-08;3!UBERON:0010368;1.17e-08;3!UBERON:0009911;1.17e-08;3!UBERON:0002299;1.17e-08;3!UBERON:0006524;1.17e-08;3!UBERON:0008874;1.17e-08;3!UBERON:0002169;1.17e-08;3!UBERON:0004894;1.17e-08;3!UBERON:0000014;8.37e-07;4!UBERON:0002346;8.37e-07;4!UBERON:0000923;8.37e-07;4!UBERON:0010316;8.37e-07;4!UBERON:0005291;8.37e-07;4!UBERON:0009856;8.37e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.93e-23;1!DOID:3149;2.93e-23;1!DOID:3451;2.45e-12;2!DOID:4159;2.45e-12;2!DOID:0060122;2.45e-12;2!DOID:3910;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.13e-23,1;DOID:3149,5.13e-23,1;DOID:3910,2.32e-12,2;DOID:3451,3.24e-12,2;DOID:4159,3.24e-12,2;DOID:0060122,3.24e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.45e-12;2!UBERON:0002173;2.45e-12;2!UBERON:0002186;2.45e-12;2!UBERON:0004821;1.17e-08;3!UBERON:0007499;1.17e-08;3!UBERON:0003215;1.17e-08;3!UBERON:0010368;1.17e-08;3!UBERON:0009911;1.17e-08;3!UBERON:0002299;1.17e-08;3!UBERON:0006524;1.17e-08;3!UBERON:0008874;1.17e-08;3!UBERON:0002169;1.17e-08;3!UBERON:0004894;1.17e-08;3!UBERON:0000014;8.37e-07;4!UBERON:0002346;8.37e-07;4!UBERON:0000923;8.37e-07;4!UBERON:0010316;8.37e-07;4!UBERON:0005291;8.37e-07;4!UBERON:0009856;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000014,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,1.5189869901714,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0,0,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0.329607748453519,0.422250816255987,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.341380344856499,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,1.62971057883012,0.31900115973192,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0.596143835108969,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0.687697182986169,0,0,0.77380195455795,0,1.0063040627978,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,1.86705782949428,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0.697448552208751,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.760191006068622,0.305966489225945,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0.449126010532934,0,0,0.406896178315738,0,0.201273793591026,0 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| ||
|short_description=p@chr16:89580747..89580750,+ | |short_description=p@chr16:89580747..89580750,+ | ||
}} | }} |
Latest revision as of 13:27, 25 July 2015
Short description: | p@chr16:89580747..89580750, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89580747..89580750, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.13e-23 | 1 |
keratoacanthoma | 5.13e-23 | 1 |
lung adenocarcinoma | 2.32e-12 | 2 |
skin carcinoma | 3.24e-12 | 2 |
skin cancer | 3.24e-12 | 2 |
integumentary system cancer | 3.24e-12 | 2 |