FFCP PHASE1:Hg19::chr2:28503793..28503800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28503793..28503800,+ | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr2:28503793..28503800,+ | |description=CAGE_peak_at_chr2:28503793..28503800,+ | ||
|id=chr2:28503793..28503800,+ | |id=chr2:28503793..28503800,+ | ||
|ontology_enrichment_celltype=CL:0000313;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000239;3.06e-12;3!CL:1000615;3.06e-12;3!CL:0002306;3.06e-12;3!CL:1000497;9.25e-09;17!CL:0002518;9.25e-09;17!CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | |ontology_enrichment_celltype=CL:0000239!5.69e-28!3;CL:1000615!5.69e-28!3;CL:0002306!5.69e-28!3;CL:1000507!6.22e-27!12;CL:1000494!6.22e-27!12;CL:1000497!3.22e-24!18;CL:0002518!3.22e-24!18;CL:1000449!4.09e-20!16;CL:0002681!1.69e-17!13;CL:0002584!1.69e-17!13;CL:0000313!6.73e-11!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000239;3.06e-12;3!CL:1000615;3.06e-12;3!CL:0002306;3.06e-12;3!CL:1000497;9.25e-09;17!CL:0002518;9.25e-09;17!CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | ||
|ontology_enrichment_disease=DOID:2152;1.84e-34;1!DOID:4468;7.05e-18;2!DOID:299;1.13e-12;25!DOID:120;8.62e-12;27!DOID:193;4.97e-11;29!DOID:3001;9.23e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0000239,2.89e-12,3;CL:1000615,2.89e-12,3;CL:0002306,2.89e-12,3;CL:1000497,9.25e-09,17;CL:0002518,9.25e-09,17;CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0004911;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0006853;3.06e-12;3!UBERON:0007685;3.06e-12;3!UBERON:0004134;3.06e-12;3!UBERON:0002394;1.44e-09;4!UBERON:0003928;1.44e-09;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!2.17e-19!2;DOID:2152!6.73e-11!1;DOID:299!4.46e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-34;1!DOID:4468;7.05e-18;2!DOID:299;1.13e-12;25!DOID:120;8.62e-12;27!DOID:193;4.97e-11;29!DOID:3001;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:4468,6.48e-18,2;DOID:299,1.13e-12,25;DOID:120,8.62e-12,27;DOID:193,4.97e-11,29;DOID:305,3.05e-08,106;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006853!5.69e-28!3;UBERON:0007685!5.69e-28!3;UBERON:0004134!5.69e-28!3;UBERON:0000489!5.39e-27!32;UBERON:0009773!6.22e-27!12;UBERON:0001231!6.22e-27!12;UBERON:0004810!6.22e-27!12;UBERON:0002113!3.39e-26!27;UBERON:0003918!3.39e-26!27;UBERON:0005095!3.39e-26!27;UBERON:0007687!3.39e-26!27;UBERON:0006554!3.08e-23!44;UBERON:0001008!1.10e-22!45;UBERON:0004211!4.09e-20!16;UBERON:0001285!4.09e-20!16;UBERON:0007684!4.09e-20!16;UBERON:0003220!4.09e-20!16;UBERON:0004208!4.09e-20!16;UBERON:0006555!6.55e-19!17;UBERON:0005103!6.55e-19!17;UBERON:0000083!6.55e-19!17;UBERON:0009201!6.55e-19!17;UBERON:0004819!6.55e-19!17;UBERON:0006553!6.55e-19!17;UBERON:0003074!6.55e-19!17;UBERON:0003060!6.55e-19!17;UBERON:0000080!7.72e-18!18;UBERON:0002120!7.72e-18!18;UBERON:0004875!7.72e-18!18;UBERON:0005721!7.72e-18!18;UBERON:0005754!7.72e-18!18;UBERON:0007297!7.72e-18!18;UBERON:0001225!1.69e-17!13;UBERON:0008987!1.69e-17!13;UBERON:0000058!1.50e-16!26;UBERON:0004876!5.13e-16!20;UBERON:0003887!3.10e-15!21;UBERON:0003064!1.22e-14!37;UBERON:0001851!3.35e-14!16;UBERON:0000353!2.33e-13!17;UBERON:0005172!3.10e-12!55;UBERON:0005173!3.10e-12!55;UBERON:0003103!9.91e-12!69;UBERON:0002417!6.59e-11!61;UBERON:0000916!6.59e-11!61;UBERON:0004911!6.73e-11!1;UBERON:0006834!3.96e-10!1;UBERON:0003886!2.76e-08!63;UBERON:0002553!2.35e-07!70;UBERON:0005177!4.99e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0006853;3.06e-12;3!UBERON:0007685;3.06e-12;3!UBERON:0004134;3.06e-12;3!UBERON:0002394;1.44e-09;4!UBERON:0003928;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.84e-34,1;UBERON:0004909,5.48e-18,2;UBERON:0006853,2.89e-12,3;UBERON:0007685,2.89e-12,3;UBERON:0004134,2.89e-12,3;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6 | |||
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|short_description=p@chr2:28503793..28503800,+ | |short_description=p@chr2:28503793..28503800,+ | ||
}} | }} |
Latest revision as of 09:19, 29 July 2015
Short description: | p@chr2:28503793..28503800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28503793..28503800, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
brush border epithelial cell | 2.89e-12 | 3 |
kidney cortex tubule cell | 2.89e-12 | 3 |
epithelial cell of proximal tubule | 2.89e-12 | 3 |
kidney cell | 9.25e-09 | 17 |
kidney epithelial cell | 9.25e-09 | 17 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.84e-34 | 1 |
epithelium of gonad | 5.48e-18 | 2 |
renal cortex tubule | 2.89e-12 | 3 |
region of nephron tubule | 2.89e-12 | 3 |
proximal tubule | 2.89e-12 | 3 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-34 | 1 |
clear cell adenocarcinoma | 6.48e-18 | 2 |
adenocarcinoma | 1.13e-12 | 25 |
female reproductive organ cancer | 8.62e-12 | 27 |
reproductive organ cancer | 4.97e-11 | 29 |
carcinoma | 3.05e-08 | 106 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |