FFCP PHASE1:Hg19::chr7:99775520..99775578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10734 | |EntrezGene=10734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11356 | |HGNC=11356 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJ98,E9PCX1,C9JYW5,C9J3T3 | |UniProt=Q9UJ98,E9PCX1,C9JYW5,C9J3T3 | ||
|association_with_transcript=0bp_to_ENST00000317296,ENST00000339784,ENST00000379577,ENST00000422690,ENST00000439782,ENST00000482546,ENST00000496157,NM_012447,uc003utx.1,uc010lgs.1,uc011kjk.1_5end | |association_with_transcript=0bp_to_ENST00000317296,ENST00000339784,ENST00000379577,ENST00000422690,ENST00000439782,ENST00000482546,ENST00000496157,NM_012447,uc003utx.1,uc010lgs.1,uc011kjk.1_5end | ||
|cluster_id=chr7:99775520..99775578,+ | |||
|coexpression_cluster_id=C3639 | |coexpression_cluster_id=C3639 | ||
|description=CAGE_peak_1_at_STAG3_5end | |description=CAGE_peak_1_at_STAG3_5end | ||
|id=chr7:99775520..99775578,+ | |id=chr7:99775520..99775578,+ | ||
|ontology_enrichment_celltype=CL:0000039;1.50e-14;7!CL:0000586;1.50e-14;7!CL:0002535;3.97e-07;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.50e-14;7!CL:0000586;1.50e-14;7!CL:0002535;3.97e-07;2 | ||
|ontology_enrichment_disease=DOID:1325;7.56e-07;7!DOID:3904;7.56e-07;7 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.58e-14,7;CL:0000586,1.58e-14,7;CL:0002535,3.98e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000473;9.46e-13;8!UBERON:0003135;4.84e-09;11!UBERON:0006955;3.97e-07;2!UBERON:0004801;3.97e-07;2 | |ontology_enrichment_development_v019=UBERON:0009117;4.97e-10;10!UBERON:0005564;4.97e-10;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;7.56e-07;7!DOID:3904;7.56e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,8.24e-07,7;DOID:3904,8.24e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.18e-09!173;UBERON:0006601!1.18e-09!173;UBERON:0004121!4.94e-09!169;UBERON:0002346!6.15e-08!90;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0003075!2.74e-07!86;UBERON:0007284!2.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.46e-13;8!UBERON:0003135;4.84e-09;11!UBERON:0006955;3.97e-07;2!UBERON:0004801;3.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.92e-13,8;UBERON:0003135,5.01e-09,11;UBERON:0006955,3.98e-07,2;UBERON:0004801,3.98e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,1.52908960491121,0.527533956456907,0,0.662794751455832,0,0,0,0,0.738726348460727,0.612002073732759,0,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.130059347559878,0.986627427622057,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.453237370790265,0.383220493601921,0,0.253019692019503,0,0,0,0,0.383959833463255,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,40.6035134042909,0.364295288292542,0,0,0,0,0.715471872916026,1.14398982156026,1.11437250398869,0.198762407366705,0,0,0,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.709336764396714,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.875829639103749,0.277064115484183,0.877955241761676,0.30648779579902,0.300476117813194,0.226864366320042,0.89694817844431,0.213557388818567,0,1.20036438433761,0,0,0,0,0.0974370051611986,0.757301322732344,0,0.161646056818812,0.710019185033229,0.201504196455281,0.508681776931463,0,0,0,0.731842236777572,0.530119073285941,0.232387885739037,0.310983165046111,0.252320850875628,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0.651616610620649,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0,0.468008530278475,3.12125440806329,0,0,0,1.16426079513703,0.290633938513962,0.766765358330422,0.492663237895943,0.44024217006613,0,0,0,1.8414389344729,0.381988425558278,2.34434894420094,0,0.719792448923265,0,0,0.224262168690721,0.87192013766656,0.22001485746285,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.579125226670317,0,0.716243852959582,0,0.394061520403854,0,0.256686072559497,0.254094624222463,0,1.54657762555539,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0.320182673410333,2.42502057157008,0,3.32629322662648,0,0,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0.385076685522074,0.784349769176855,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0.256450125116389,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0,0.413509717453592,0.322260734604821,0.290033387828457,0.170453254832202,0.623224249527161,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,1.25924938732256,0,0,0,1.73986598415015,0.18532421910392,0.715624433709956,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,0,1.10273068709225,0,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0.354761064070598,0,0,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54008299268659,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0.293016358543788,2.18448939149124,0,0,0.95497793895076,4.75143489332222,2.76444631889309,0.994147647766298,0,0,0,0.211125408127993,0,0.552567831062295,30.987727986076,0,0.738508832766417,0.311039587661807,0,0,6.65044081294933,0.197286811273867,0,0,0,0.371072392647405,0,0,0.524759999977174,0,0,17.2892482199081,2.12748913591143,4.82640722538051,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,54.4828901567317,24.9888955420619,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.808813595768125,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0.91821828489147,0.505492637027904,0,0,0,0,0,0,0,0,0,0,56.3273066575205,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0.794858446811959,0.253243183823515,0,0,0.213452994739353,3.19695375331408,0,0,0,0,0,0,1.76675467895698,1.77824838730966,0,0,0.600420288709789,1.09524303113594,10.2197270453578,0.859530882839914,0,0.279282401272254,0,0,10.7826660269455,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0,33.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| 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| ||
|short_description=p1@STAG3 | |short_description=p1@STAG3 | ||
}} | }} |
Latest revision as of 17:54, 24 September 2015
Short description: | p1@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAG3_5end |
Coexpression cluster: | C3639_testis_testicular_small_epidermoid_choriocarcinoma_argyrophil_hereditary |
Association with transcript: | 0bp_to_ENST00000317296, ENST00000339784, ENST00000379577, ENST00000422690, ENST00000439782, ENST00000482546, ENST00000496157, NM_012447, uc003utx.1, uc010lgs.1, uc011kjk.1_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | Q9UJ98E9PCX1C9JYW5C9J3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.58e-14 | 7 |
germ cell | 1.58e-14 | 7 |
epithelial cell of cervix | 3.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 9.92e-13 | 8 |
male reproductive organ | 5.01e-09 | 11 |
uterine epithelium | 3.98e-07 | 2 |
cervix epithelium | 3.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 8.24e-07 | 7 |
bronchogenic carcinoma | 8.24e-07 | 7 |