FFCP PHASE1:Hg19::chr11:59436609..59436650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219988 | |EntrezGene=219988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26721 | |HGNC=26721 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB9 | |UniProt=Q86TB9 | ||
|association_with_transcript=-98bp_to_NM_152716,uc001noe.3,uc009yms.1_5end | |association_with_transcript=-98bp_to_NM_152716,uc001noe.3,uc009yms.1_5end | ||
|cluster_id=chr11:59436609..59436650,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_PATL1_5end | |description=CAGE_peak_2_at_PATL1_5end | ||
|id=chr11:59436609..59436650,- | |id=chr11:59436609..59436650,- | ||
|ontology_enrichment_celltype=CL:0000860;1.04e-15;33!CL:0002057;1.04e-15;33!CL:0000473;2.22e-11;39!CL:0000234;2.22e-11;39!CL:0000576;6.78e-09;48!CL:0000766;1.94e-08;69 | |ontology_enrichment_celltype=CL:0000012!8.98e-20!682;CL:0000548!1.51e-19!679;CL:0000004!1.51e-19!679;CL:0000255!1.51e-19!679;CL:0000063!1.24e-17!578;CL:0000860!4.75e-16!45;CL:0000766!6.83e-16!76;CL:0002057!2.69e-15!42;CL:0000066!3.22e-14!254;CL:0000557!2.55e-13!71;CL:0000003!3.85e-13!722;CL:0002009!1.16e-11!65;CL:0000839!1.92e-11!70;CL:0002194!1.02e-10!63;CL:0000576!1.02e-10!63;CL:0000040!1.02e-10!63;CL:0000559!1.02e-10!63;CL:0000144!4.47e-09!625;CL:0000763!2.93e-08!112;CL:0000049!2.93e-08!112;CL:0002371!7.08e-07!591 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.04e-15;33!CL:0002057;1.04e-15;33!CL:0000473;2.22e-11;39!CL:0000234;2.22e-11;39!CL:0000576;6.78e-09;48!CL:0000766;1.94e-08;69 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000766,2.22e-15,72;CL:0000860,2.65e-15,42;CL:0002057,2.65e-15,42;CL:0000066,4.92e-14,253;CL:0000473,1.86e-13,48;CL:0000234,1.86e-13,48;CL:0000557,8.32e-13,67;CL:0002009,3.76e-11,61;CL:0000839,6.31e-11,66;CL:0002194,3.29e-10,59;CL:0000576,3.29e-10,59;CL:0000040,3.29e-10,59;CL:0000559,3.29e-10,59;CL:0000763,1.02e-07,108;CL:0000049,1.02e-07,108 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;9.01e-12;42 | ||
|ontology_enrichment_disease=DOID:305!4.53e-11!106;DOID:0050687!2.54e-10!143;DOID:162!6.98e-09!235;DOID:14566!1.00e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.66e-11,106;DOID:0050687,3.06e-10,143;DOID:162,9.06e-09,235;DOID:14566,1.35e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000926!4.50e-10!448;UBERON:0004120!4.50e-10!448;UBERON:0006603!4.50e-10!448;UBERON:0002371!1.03e-09!80;UBERON:0002390!1.78e-09!102;UBERON:0003061!1.78e-09!102;UBERON:0002193!1.79e-09!112;UBERON:0002405!3.68e-09!115;UBERON:0001474!1.62e-08!86;UBERON:0004765!7.77e-07!101;UBERON:0001434!7.77e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-09,76;UBERON:0002193,5.72e-09,108;UBERON:0002390,5.75e-09,98;UBERON:0003061,5.75e-09,98;UBERON:0001474,5.13e-08,82;UBERON:0002405,8.34e-08,93 | |||
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| ||
|short_description=p2@PATL1 | |short_description=p2@PATL1 | ||
}} | }} |
Latest revision as of 12:27, 18 September 2015
Short description: | p2@PATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PATL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -98bp_to_NM_152716, uc001noe.3, uc009yms.1_5end |
EntrezGene: | PATL1 |
HGNC: | 26721 |
UniProt: | Q86TB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.22e-15 | 72 |
classical monocyte | 2.65e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-15 | 42 |
epithelial cell | 4.92e-14 | 253 |
defensive cell | 1.86e-13 | 48 |
phagocyte | 1.86e-13 | 48 |
granulocyte monocyte progenitor cell | 8.32e-13 | 67 |
macrophage dendritic cell progenitor | 3.76e-11 | 61 |
myeloid lineage restricted progenitor cell | 6.31e-11 | 66 |
monopoietic cell | 3.29e-10 | 59 |
monocyte | 3.29e-10 | 59 |
monoblast | 3.29e-10 | 59 |
promonocyte | 3.29e-10 | 59 |
myeloid cell | 1.02e-07 | 108 |
common myeloid progenitor | 1.02e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.39e-09 | 76 |
hemolymphoid system | 5.72e-09 | 108 |
hematopoietic system | 5.75e-09 | 98 |
blood island | 5.75e-09 | 98 |
bone element | 5.13e-08 | 82 |
immune system | 8.34e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.66e-11 | 106 |
cell type cancer | 3.06e-10 | 143 |
cancer | 9.06e-09 | 235 |
disease of cellular proliferation | 1.35e-08 | 239 |