FFCP PHASE1:Hg19::chr19:9087492..9087495,-: Difference between revisions
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|id=chr19:9087492..9087495,-
|short_description=p@chr19:9087492..9087495,-
|description=CAGE_peak_at_chr19:9087492..9087495,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:9087492..9087495,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr19:9087492..9087495,- | |||
|id=chr19:9087492..9087495,- | |||
|ontology_enrichment_celltype=CL:0002537!5.29e-19!5;CL:0002541!1.51e-14!3;CL:0002150!5.77e-14!3;CL:0000861!5.77e-14!3;CL:1001319!6.00e-11!1;CL:1000600!6.00e-11!1;CL:0002149!8.95e-08!6;CL:0002255!8.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.74e-53;5!CL:0000349;5.66e-15;19!CL:0002149;2.19e-12;6!CL:0002255;2.19e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.74e-53,5;CL:0000349,5.66e-15,19;CL:0002149,2.19e-12,6;CL:0002255,2.19e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:6193!1.31e-11!1;DOID:305!6.33e-08!106;DOID:3001!8.95e-08!6;DOID:0050687!9.15e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.01e-18!14;UBERON:0000158!4.01e-18!14;UBERON:0000476!1.51e-14!3;UBERON:0000920!1.51e-14!3;UBERON:0000305!9.54e-14!7;UBERON:0004871!4.24e-12!8;UBERON:0006834!4.44e-11!1;UBERON:0004645!6.00e-11!1;UBERON:0001256!6.00e-11!1;UBERON:0001259!6.00e-11!1;UBERON:0000478!1.57e-10!24;UBERON:0000995!7.96e-08!21;UBERON:0005795!1.78e-07!22;UBERON:0003975!1.78e-07!22;UBERON:0003124!9.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.18e-38;7!UBERON:0005631;2.72e-27;10!UBERON:0000158;2.72e-27;10!UBERON:0000478;4.20e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.18e-38,7;UBERON:0004871,9.08e-34,8;UBERON:0005631,7.13e-20,14;UBERON:0000158,7.13e-20,14;UBERON:0000478,4.20e-12,24 | |||
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|short_description=p@chr19:9087492..9087495,- | |||
}} | }} |
Latest revision as of 18:45, 27 July 2015
Short description: | p@chr19:9087492..9087495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9087492..9087495, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.74e-53 | 5 |
extraembryonic cell | 5.66e-15 | 19 |
epithelial cell of uterus | 2.19e-12 | 6 |
stromal cell of endometrium | 2.19e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.18e-38 | 7 |
somatic layer of lateral plate mesoderm | 9.08e-34 | 8 |
extraembryonic membrane | 7.13e-20 | 14 |
membranous layer | 7.13e-20 | 14 |
extraembryonic structure | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.19e-12 | 6 |