FFCP PHASE1:Hg19::chr6:123958068..123958110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDT2 | |UniProt=E9PDT2 | ||
|association_with_transcript=0bp_to_ENST00000265491_5end | |association_with_transcript=0bp_to_ENST00000265491_5end | ||
|cluster_id=chr6:123958068..123958110,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_1_at_TRDN_5end | |description=CAGE_peak_1_at_TRDN_5end | ||
|id=chr6:123958068..123958110,- | |id=chr6:123958068..123958110,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;3.03e-08;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0007100;1.65e-12;25!UBERON:0004151;9.09e-12;3!UBERON:0003978;1.01e-11;3!UBERON:0000946;1.01e-11;3!UBERON:0002240;3.08e-10;3!UBERON:0005174;3.08e-10;3!UBERON:0001137;3.08e-10;3!UBERON:0007023;2.51e-09;114!UBERON:0005090;1.11e-08;2!UBERON:0001630;1.11e-08;2!UBERON:0000341;1.97e-08;2!UBERON:0002081;2.63e-08;2!UBERON:0002133;2.72e-08;2!UBERON:0003296;5.44e-08;4!UBERON:0010133;5.44e-08;4!UBERON:0003127;5.80e-08;2!UBERON:0000007;1.06e-07;2!UBERON:0001829;1.48e-07;2!UBERON:0000948;4.38e-07;22 | |ontology_enrichment_development_v019=UBERON:0006241;3.08e-10;3!UBERON:0003057;3.08e-10;3!UBERON:0006601;5.93e-09;82!UBERON:0005062;6.94e-09;4!UBERON:0007284;6.94e-09;4!UBERON:0006603;3.80e-07;65 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-66!115;UBERON:0001049!2.48e-22!57;UBERON:0005068!2.48e-22!57;UBERON:0006241!2.48e-22!57;UBERON:0007135!2.48e-22!57;UBERON:0003075!3.11e-19!86;UBERON:0007284!3.11e-19!86;UBERON:0002346!6.48e-18!90;UBERON:0002616!1.52e-16!59;UBERON:0005743!6.70e-16!86;UBERON:0001017!7.23e-16!82;UBERON:0002780!3.65e-14!41;UBERON:0001890!3.65e-14!41;UBERON:0006240!3.65e-14!41;UBERON:0000955!8.37e-14!69;UBERON:0006238!8.37e-14!69;UBERON:0003080!1.07e-13!42;UBERON:0000073!1.60e-13!94;UBERON:0001016!1.60e-13!94;UBERON:0000153!1.70e-12!129;UBERON:0007811!1.70e-12!129;UBERON:0002308!9.60e-12!9;UBERON:0000125!9.60e-12!9;UBERON:0002298!1.42e-10!8;UBERON:0004121!1.64e-10!169;UBERON:0003076!1.76e-10!15;UBERON:0003057!1.76e-10!15;UBERON:0000033!3.51e-10!123;UBERON:0000924!5.22e-10!173;UBERON:0006601!5.22e-10!173;UBERON:0001894!3.28e-09!7;UBERON:0006222!3.28e-09!7;UBERON:0002420!5.66e-09!9;UBERON:0007245!5.66e-09!9;UBERON:0010009!5.66e-09!9;UBERON:0010011!5.66e-09!9;UBERON:0000454!5.66e-09!9;UBERON:0009663!8.59e-09!7;UBERON:0003056!8.77e-09!61;UBERON:0002020!1.02e-08!34;UBERON:0003528!1.02e-08!34;UBERON:0001893!1.64e-08!34;UBERON:0003296!4.08e-08!4;UBERON:0010133!4.08e-08!4;UBERON:0002791!9.45e-08!33;UBERON:0004151!2.21e-07!3;UBERON:0003978!2.35e-07!3;UBERON:0009751!2.35e-07!3;UBERON:0000946!2.35e-07!3;UBERON:0002523!2.35e-07!3;UBERON:0005983!2.35e-07!3;UBERON:0002165!2.35e-07!3;UBERON:0002062!2.35e-07!3;UBERON:0007280!2.35e-07!3;UBERON:0004111!3.18e-07!241;UBERON:0001869!8.87e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.65e-12;25!UBERON:0004151;9.09e-12;3!UBERON:0003978;1.01e-11;3!UBERON:0000946;1.01e-11;3!UBERON:0002240;3.08e-10;3!UBERON:0005174;3.08e-10;3!UBERON:0001137;3.08e-10;3!UBERON:0007023;2.51e-09;114!UBERON:0005090;1.11e-08;2!UBERON:0001630;1.11e-08;2!UBERON:0000341;1.97e-08;2!UBERON:0002081;2.63e-08;2!UBERON:0002133;2.72e-08;2!UBERON:0003296;5.44e-08;4!UBERON:0010133;5.44e-08;4!UBERON:0003127;5.80e-08;2!UBERON:0000007;1.06e-07;2!UBERON:0001829;1.48e-07;2!UBERON:0000948;4.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.59e-34,114;UBERON:0003103,2.33e-12,68;UBERON:0004151,9.09e-12,3;UBERON:0003978,1.01e-11,3;UBERON:0009751,1.01e-11,3;UBERON:0000946,1.01e-11,3;UBERON:0002523,1.01e-11,3;UBERON:0005983,1.01e-11,3;UBERON:0002165,1.01e-11,3;UBERON:0002062,1.01e-11,3;UBERON:0007280,1.01e-11,3;UBERON:0007100,2.02e-11,27;UBERON:0002240,3.40e-10,3;UBERON:0005174,3.40e-10,3;UBERON:0001137,3.40e-10,3;UBERON:0010314,1.45e-09,132;UBERON:0005090,1.11e-08,2;UBERON:0001630,1.11e-08,2;UBERON:0000341,1.97e-08,2;UBERON:0002081,2.63e-08,2;UBERON:0010227,2.63e-08,2;UBERON:0002133,2.72e-08,2;UBERON:0003296,5.18e-08,4;UBERON:0010133,5.18e-08,4;UBERON:0003127,5.90e-08,2;UBERON:0000007,9.88e-08,2;UBERON:0001829,1.53e-07,2;UBERON:0003076,4.09e-07,15;UBERON:0003057,4.09e-07,15 | |||
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| ||
|short_description=p1@TRDN | |short_description=p1@TRDN | ||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p1@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRDN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000265491_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | E9PDT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.59e-34 | 114 |
compound organ | 2.33e-12 | 68 |
cardiac chamber | 9.09e-12 | 3 |
valve | 1.01e-11 | 3 |
cardiac mesenchyme | 1.01e-11 | 3 |
cardial valve | 1.01e-11 | 3 |
tunica intima | 1.01e-11 | 3 |
heart layer | 1.01e-11 | 3 |
endocardium | 1.01e-11 | 3 |
endocardial cushion | 1.01e-11 | 3 |
presumptive endocardium | 1.01e-11 | 3 |
primary circulatory organ | 2.02e-11 | 27 |
spinal cord | 3.40e-10 | 3 |
dorsal region element | 3.40e-10 | 3 |
dorsum | 3.40e-10 | 3 |
structure with developmental contribution from neural crest | 1.45e-09 | 132 |
muscle structure | 1.11e-08 | 2 |
muscle organ | 1.11e-08 | 2 |
throat | 1.97e-08 | 2 |
cardiac atrium | 2.63e-08 | 2 |
future cardiac atrium | 2.63e-08 | 2 |
atrioventricular valve | 2.72e-08 | 2 |
gland of diencephalon | 5.18e-08 | 4 |
neuroendocrine gland | 5.18e-08 | 4 |
open tracheal system trachea | 5.90e-08 | 2 |
pituitary gland | 9.88e-08 | 2 |
major salivary gland | 1.53e-07 | 2 |
posterior neural tube | 4.09e-07 | 15 |
chordal neural plate | 4.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.03e-08 | 2 |