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{{UBERON
{{UBERON
|id=UBERON:0004535
|alt_id=
|name=cardiovascular system
|namespace=
|def="Anatomical system that has as its parts the heart and blood vessels." [BTO:0000088]
|xref=AAO:0011001;;BILA:0000016;;BTO:0000088;;EFO:0000791;;EHDAA2:0000216;;EHDAA:394;;EMAPA:16104;;EMAPA:16370;;EV:0100017;;FMA:7161;;GAID:467;;MA:0000010;;MAT:0000016;;MESH:A.07;;MIAA:0000016;;ncithesaurus:Cardiovascular_System;;OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA;;SCTID:278198007;;TAO:0000010;;VHOG:0000302;;XAO:0000100;;XAO:0001010;;ZFA:0000010
|is_a=UBERON:0000467
|synonym="CV system" RELATED [BTO:0000088];;"Herz und Gefaesssystem" RELATED [BTO:0000088]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Anatomical system that has as its parts the heart and blood vessels." [BTO:0000088]
|subset=uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004535
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=cardiovascular system
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001009
|part_of=UBERON:0001009
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim;;vertebrate_core
|preceded_by=
|synonym="CV system" RELATED [BTO:0000088];;"Herz und Gefaesssystem" RELATED [BTO:0000088]
|union_of=
|xref=AAO:0011001;;BILA:0000016;;BTO:0000088;;EFO:0000791;;EHDAA2:0000216;;EHDAA:394;;EMAPA:16104;;EMAPA:16370;;EV:0100017;;FMA:7161;;GAID:467;;MA:0000010;;MAT:0000016;;MESH:A.07;;MIAA:0000016;;ncithesaurus:Cardiovascular_System;;OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA;;SCTID:278198007;;TAO:0000010;;VHOG:0000302;;XAO:0000100;;XAO:0001010;;ZFA:0000010
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:cardiovascular system
Namespace:FANTOM
Definition:"Anatomical system that has as its parts the heart and blood vessels." [BTO:0000088]
Xrefs:
links:

AAO:0011001
BILA:0000016
BTO:0000088
EFO:0000791
EHDAA2:0000216
EHDAA:394
EMAPA:16104
EMAPA:16370
EV:0100017
FMA:7161
GAID:467
MA:0000010
MAT:0000016
MESH:A.07
MIAA:0000016
ncithesaurus:Cardiovascular_System
OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA
SCTID:278198007
TAO:0000010
VHOG:0000302
XAO:0000100
XAO:0001010

ZFA:0000010
Synonyms: "CV system" RELATED [BTO:0000088]
"Herz und Gefaesssystem" RELATED [BTO:0000088]
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
part_of:UBERON:0001009(circulatory system)



Children

is a:UBERON:0011695 (embryonic cardiovascular system)
part of:UBERON:0000178 (blood),UBERON:0003084 (heart primordium),UBERON:0004537 (blood vasculature),UBERON:0004572 (arterial system),UBERON:0004852 (cardiovascular system endothelium),UBERON:0007798 (vascular system),UBERON:0008886 (pulmonary vascular system),UBERON:0015410 (heart plus pericardium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004535 (cardiovascular system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.2e-82FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_4d3f53f7e1369d8240af66878fc79d02p2@SOX17
6.2e-82FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_4d3f53f7e1369d8240af66878fc79d02p2@SOX17
7.97e-71FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_a7035eed53688542c89e68eb0424cbdcp@chr12:96830430..96830450, +
7.97e-71FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_a7035eed53688542c89e68eb0424cbdcp@chr12:96830430..96830450, +
1.13e-70FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_27c2521d67ef07aeb028c88b918e63d7p@chr11:128562673..128562716, -
1.13e-70FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_27c2521d67ef07aeb028c88b918e63d7p@chr11:128562673..128562716, -
2.4e-67FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_7f112db597568bdfaf12cdd4b186900ep@chr19:36187511..36187515, -
2.4e-67FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_7f112db597568bdfaf12cdd4b186900ep@chr19:36187511..36187515, -
1.46e-63FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_113e5573c3d3477c210d3662bade37b2p@chr9:24549775..24549776, -
1.46e-63FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_113e5573c3d3477c210d3662bade37b2p@chr4:147375434..147375447, +
1.46e-63FFCP PHASE1:Mm9::chr4:151692832..151692868,+#_113e5573c3d3477c210d3662bade37b2p@chr4:151692832..151692868, +
1.46e-63FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_113e5573c3d3477c210d3662bade37b2p@chr9:24549775..24549776, -
1.46e-63FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_113e5573c3d3477c210d3662bade37b2p@chr1:137747392..137747402, -
1.46e-63FFCP PHASE2:Mm9::chr4:151692832..151692868,+#_113e5573c3d3477c210d3662bade37b2p@chr4:151692832..151692868, +
1.46e-63FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_113e5573c3d3477c210d3662bade37b2p@chr4:147375434..147375447, +
1.46e-63FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_113e5573c3d3477c210d3662bade37b2p@chr1:137747392..137747402, -
7.0e-61FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_38e6ef3e1254fca8e60bfd5ff694e1e3p@chr4:140980456..140980463, +
7.0e-61FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_38e6ef3e1254fca8e60bfd5ff694e1e3p@chr4:140980456..140980463, +
7.27e-61FFCP PHASE1:Hg19::chr15:39542867..39542890,+#_25850b31b3d3a6a57360756eef3e5296p1@C15orf54
7.27e-61FFCP PHASE2:Hg19::chr15:39542867..39542890,+#_25850b31b3d3a6a57360756eef3e5296p1@C15orf54
1.56e-60FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_cbddc853dde47b7535619635d5ad95a6p@chr3:30334038..30334060, +
1.56e-60FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_cbddc853dde47b7535619635d5ad95a6p@chr3:30334038..30334060, +
3.45e-60FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_c0c6d8aaec4a53298530301f92c91317p@chr12:113728951..113728965, +
3.45e-60FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_c0c6d8aaec4a53298530301f92c91317p@chr12:113728951..113728965, +
3.45e-60FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_c0c6d8aaec4a53298530301f92c91317p@chr1:137737483..137737497, -
3.45e-60FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_c0c6d8aaec4a53298530301f92c91317p@chr1:137737483..137737497, -
3.77e-60FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_dbd8acbf594c12e21b1a6752c73d8dabp@chr4:147375200..147375220, +
3.77e-60FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_dbd8acbf594c12e21b1a6752c73d8dabp@chr4:147375200..147375220, +
8.52e-60FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744668..137744681, -
8.52e-60FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568737..55568746, -
8.52e-60FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744550..137744565, +
8.52e-60FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55563577..55563611, -
8.52e-60FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_608c68f73df6918e38f8cdbf82d56feap2@Mov10l1
8.52e-60FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_608c68f73df6918e38f8cdbf82d56feap@chr11:65461897..65461929, -
8.52e-60FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55565785..55565833, -
8.52e-60FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55579265..55579297, -
8.52e-60FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55581579..55581620, -
8.52e-60FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584663..55584731, -
8.52e-60FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_608c68f73df6918e38f8cdbf82d56feap@chr4:147375901..147375913, +
8.52e-60FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55563577..55563611, -
8.52e-60FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_608c68f73df6918e38f8cdbf82d56feap@chr19:36193772..36193793, -
8.52e-60FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_608c68f73df6918e38f8cdbf82d56feap2@Mov10l1
8.52e-60FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_608c68f73df6918e38f8cdbf82d56feap@chr5:120286706..120286736, +
8.52e-60FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55586837..55586880, -
8.52e-60FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744636..137744654, +
8.52e-60FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584272..55584298, -
8.52e-60FFCP PHASE1:Mm9::chrX:56432790..56432814,+#_608c68f73df6918e38f8cdbf82d56feap@chrX:56432790..56432814, +
8.52e-60FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744333..137744352, -
8.52e-60FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137743272..137743307, +
8.52e-60FFCP PHASE2:Mm9::chrX:56432790..56432814,+#_608c68f73df6918e38f8cdbf82d56feap@chrX:56432790..56432814, +
8.52e-60FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744611..137744621, +
8.52e-60FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744333..137744352, -
8.52e-60FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_608c68f73df6918e38f8cdbf82d56feap@chr14:55572120..55572173, +
8.52e-60FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137745434..137745445, +
8.52e-60FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568937..55568988, -
8.52e-60FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137743272..137743307, +
8.52e-60FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55579265..55579297, -
8.52e-60FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55581579..55581620, -
8.52e-60FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_608c68f73df6918e38f8cdbf82d56feap@chr4:147375901..147375913, +
8.52e-60FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744668..137744681, -
8.52e-60FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_608c68f73df6918e38f8cdbf82d56feap@chr14:55572120..55572173, +
8.52e-60FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568790..55568803, -
8.52e-60FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_608c68f73df6918e38f8cdbf82d56feap@chr5:120286706..120286736, +
8.52e-60FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584197..55584239, -
8.52e-60FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_608c68f73df6918e38f8cdbf82d56feap@chr11:58815923..58815951, -
8.52e-60FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584197..55584239, -
8.52e-60FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568790..55568803, -
8.52e-60FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584663..55584731, -
8.52e-60FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568737..55568746, -
8.52e-60FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55568937..55568988, -
8.52e-60FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747289..137747313, +
8.52e-60FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744550..137744565, +
8.52e-60FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55584272..55584298, -
8.52e-60FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747382..137747385, -
8.52e-60FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747953..137747967, -
8.52e-60FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_608c68f73df6918e38f8cdbf82d56feap@chr19:36193772..36193793, -
8.52e-60FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747289..137747313, +
8.52e-60FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55586837..55586880, -
8.52e-60FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_608c68f73df6918e38f8cdbf82d56feap@chr11:58815923..58815951, -
8.52e-60FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55571909..55571953, -
8.52e-60FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_608c68f73df6918e38f8cdbf82d56feap@chr11:65461897..65461929, -
8.52e-60FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137745434..137745445, +
8.52e-60FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744636..137744654, +
8.52e-60FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55565785..55565833, -
8.52e-60FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747382..137747385, -
8.52e-60FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_608c68f73df6918e38f8cdbf82d56feap@chr14:55571909..55571953, -
8.52e-60FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_608c68f73df6918e38f8cdbf82d56feap@chr1:137747953..137747967, -
8.52e-60FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_608c68f73df6918e38f8cdbf82d56feap@chr1:137744611..137744621, +
3.61e-57FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_b2ba76e4e2893693422463c0d8b7fcaap@chr1:137742152..137742184, -
3.61e-57FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_b2ba76e4e2893693422463c0d8b7fcaap@chr1:137742152..137742184, -
2.05e-56FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_a873f46e82f8e8cf8af40793a0664f1cp@chr1:137742470..137742481, +
2.05e-56FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_a873f46e82f8e8cf8af40793a0664f1cp2@Tnni3
2.05e-56FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_a873f46e82f8e8cf8af40793a0664f1cp@chr16:5431481..5431510, +
2.05e-56FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_a873f46e82f8e8cf8af40793a0664f1cp@chr14:55577329..55577367, -
2.05e-56FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_a873f46e82f8e8cf8af40793a0664f1cp@chr14:55577329..55577367, -
2.05e-56FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_a873f46e82f8e8cf8af40793a0664f1cp@chr16:5431481..5431510, +
2.05e-56FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_a873f46e82f8e8cf8af40793a0664f1cp2@Tnni3
2.05e-56FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_a873f46e82f8e8cf8af40793a0664f1cp@chr1:137742470..137742481, +
2.23e-56FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_9fd54b1a2e860acc9062e1284856995cp@chr10:53062244..53062249, +
2.23e-56FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_9fd54b1a2e860acc9062e1284856995cp5@Nebl

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