CL:0002188: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="An endothelial cell found in the glomerulus of the kidney. This cell is flattened, highly fenestrated, and plays a vital role in the formation of glomerular ultrafiltrate." [GOC:tfm, PMID:15840009] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002188 | |||
|is_a=CL:0000115 ;;CL:0000666 ;;CL:1000746 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=glomerular endothelial cell | ||
|namespace=FANTOM | |||
|obo_creation_date=2010-08-26T10:59:44Z | |||
|part_of=UBERON:0000074 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0004632;;FMA:70970 | |||
}} | }} | ||
Latest revision as of 16:41, 12 September 2014
| Name: | glomerular endothelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endothelial cell found in the glomerulus of the kidney. This cell is flattened, highly fenestrated, and plays a vital role in the formation of glomerular ultrafiltrate." [GOC:tfm, PMID:15840009] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-08-26T10:59:44Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000115(endothelial cell),CL:0000666(fenestrated cell),CL:1000746(glomerular cell) |
|---|---|
| part_of: | UBERON:0000074(renal glomerulus) |
Children
| derives from: | FF:0000153 (human renal glomerular endothelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
- 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)
Mouse (Mus musculus)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
- 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002188 (glomerular endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.64e-89 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_219c299a84a91193255f05ac69e42b3f | p@chr2:120409486..120409492, + |
| 6.64e-89 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_219c299a84a91193255f05ac69e42b3f | p@chr2:120409486..120409492, + |
| 6.45e-51 | FFCP PHASE1:Hg19::chr17:79426453..79426462,+#_5e531b7d28baa8c3b0108c02c48ea1e6 | p@chr17:79426453..79426462, + |
| 6.45e-51 | FFCP PHASE2:Hg19::chr17:79426453..79426462,+#_5e531b7d28baa8c3b0108c02c48ea1e6 | p@chr17:79426453..79426462, + |
| 7.65e-51 | FFCP PHASE1:Hg19::chr8:77557753..77557755,-#_9875b9a93678122a5c4b7202ab2131cf | p@chr8:77557753..77557755, - |
| 7.65e-51 | FFCP PHASE2:Hg19::chr8:77557753..77557755,-#_9875b9a93678122a5c4b7202ab2131cf | p@chr8:77557753..77557755, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr6:18225523..18225534,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr6:18225523..18225534, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr2:26700984..26700993,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p7@OTOF |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:42777312..42777314,+#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr1:42777312..42777314, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr22:47030082..47030087,+#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr22:47030082..47030087, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr2:26700331..26700340,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr2:26700331..26700340, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr2:26700984..26700993,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p7@OTOF |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:42777312..42777314,+#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr1:42777312..42777314, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr2:26700331..26700340,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr2:26700331..26700340, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr6:18225523..18225534,-#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr6:18225523..18225534, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr22:47030082..47030087,+#_3a781c0d9e3d84b8ab55ee8c52dbedb7 | p@chr22:47030082..47030087, + |
| 2.23e-37 | FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_34f1ceb8b2d1a914542c7fb8f950e93f | p@chr10:3477893..3477912, - |
| 2.23e-37 | FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_34f1ceb8b2d1a914542c7fb8f950e93f | p@chr10:3477893..3477912, - |
| 3.93e-36 | FFCP PHASE1:Hg19::chrX:128782722..128782738,-#_37b684699d777f66c8148df7ceed80de | p5@APLN |
| 3.93e-36 | FFCP PHASE2:Hg19::chrX:128782722..128782738,-#_37b684699d777f66c8148df7ceed80de | p5@APLN |
| 5.92e-36 | FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_6dc63ae66cedc62ed6eb3e03e6a3a10d | p@chr1:172926077..172926120, - |
| 5.92e-36 | FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_6dc63ae66cedc62ed6eb3e03e6a3a10d | p@chr1:172926077..172926120, - |
| 1.44e-32 | FFCP PHASE1:Hg19::chr6:84849252..84849259,+#_3074a05054a62b4a1e8756d94abff7ef | p@chr6:84849252..84849259, + |
| 1.44e-32 | FFCP PHASE2:Hg19::chr6:84849252..84849259,+#_3074a05054a62b4a1e8756d94abff7ef | p@chr6:84849252..84849259, + |
| 1.7e-32 | FFCP PHASE1:Hg19::chr7:28998254..28998261,-#_84d7ea0ccd8aeba103bd8d0e9cf5ad15 | p10@TRIL |
| 1.7e-32 | FFCP PHASE2:Hg19::chr7:28998254..28998261,-#_84d7ea0ccd8aeba103bd8d0e9cf5ad15 | p10@TRIL |
| 1.99e-32 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_f47dcee463f7337280a2a7657ab0138e | p@chr15:85403302..85403304, + |
| 1.99e-32 | FFCP PHASE1:Hg19::chr7:4051097..4051112,+#_f47dcee463f7337280a2a7657ab0138e | p@chr7:4051097..4051112, + |
| 1.99e-32 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_f47dcee463f7337280a2a7657ab0138e | p@chr15:85403302..85403304, + |
| 1.99e-32 | FFCP PHASE2:Hg19::chr7:4051097..4051112,+#_f47dcee463f7337280a2a7657ab0138e | p@chr7:4051097..4051112, + |
| 1.91e-30 | FFCP PHASE1:Hg19::chr5:148651758..148651769,-#_c11db437b4613ab7cd24953e483b9988 | p@chr5:148651758..148651769, - |
| 1.91e-30 | FFCP PHASE2:Hg19::chr5:148651758..148651769,-#_c11db437b4613ab7cd24953e483b9988 | p@chr5:148651758..148651769, - |
| 9.41e-29 | FFCP PHASE2:Hg19::chr1:32712897..32712909,+#_edd5616c3b2b82b6d95352afcdd865f4 | p3@FAM167B |
| 9.41e-29 | FFCP PHASE1:Hg19::chr1:32712897..32712909,+#_edd5616c3b2b82b6d95352afcdd865f4 | p3@FAM167B |
| 3.34e-28 | FFCP PHASE2:Hg19::chr11:124628392..124628427,-#_07a78405df8b6426fe66a59722877061 | p@chr11:124628392..124628427, - |
| 3.34e-28 | FFCP PHASE1:Hg19::chr11:124628392..124628427,-#_07a78405df8b6426fe66a59722877061 | p@chr11:124628392..124628427, - |
| 3.85e-28 | FFCP PHASE2:Hg19::chr3:98591021..98591026,-#_d956648047c8ca098d11a38ce018e103 | p1@ENST00000487339 |
| 3.85e-28 | FFCP PHASE1:Hg19::chr3:98591021..98591026,-#_d956648047c8ca098d11a38ce018e103 | p1@ENST00000487339 |
| 5.46e-28 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_eaf60d15807a7c83992d0cd46c4da0c6 | p@chr4:38057595..38057624, - |
| 5.46e-28 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_eaf60d15807a7c83992d0cd46c4da0c6 | p@chr4:38057595..38057624, - |
| 5.82e-28 | FFCP PHASE1:Hg19::chr19:47231340..47231383,-#_1e64bc38948017d0c146cd6b434492bc | p@chr19:47231340..47231383, - |
| 5.82e-28 | FFCP PHASE2:Hg19::chr19:47231340..47231383,-#_1e64bc38948017d0c146cd6b434492bc | p@chr19:47231340..47231383, - |
| 2.72e-27 | FFCP PHASE1:Hg19::chr9:35753821..35753835,-#_ec096b135fa657d679c2e17fde01809a | p@chr9:35753821..35753835, - |
| 2.72e-27 | FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_ec096b135fa657d679c2e17fde01809a | p@chr15:36653709..36653720, - |
| 2.72e-27 | FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_ec096b135fa657d679c2e17fde01809a | p@chr15:36653709..36653720, - |
| 2.72e-27 | FFCP PHASE2:Hg19::chr9:35753821..35753835,-#_ec096b135fa657d679c2e17fde01809a | p@chr9:35753821..35753835, - |
| 3.11e-27 | FFCP PHASE2:Hg19::chr4:145568170..145568180,-#_bee76aff89a97478082655fde71ad3b5 | p@chr4:145568170..145568180, - |
| 3.11e-27 | FFCP PHASE1:Hg19::chr4:145568170..145568180,-#_bee76aff89a97478082655fde71ad3b5 | p@chr4:145568170..145568180, - |
| 3.95e-27 | FFCP PHASE1:Hg19::chr12:52306196..52306215,+#_666413b4fea646fa6e2dca3c14bc76d2 | p6@ACVRL1 |
| 3.95e-27 | FFCP PHASE2:Hg19::chr12:52306196..52306215,+#_666413b4fea646fa6e2dca3c14bc76d2 | p6@ACVRL1 |
| 4.06e-27 | FFCP PHASE2:Hg19::chr19:38397228..38397266,-#_9246ea5b56ab6298e383ebd7c5e23197 | p1@WDR87 |
| 4.06e-27 | FFCP PHASE1:Hg19::chr19:38397228..38397266,-#_9246ea5b56ab6298e383ebd7c5e23197 | p1@WDR87 |
| 4.63e-27 | FFCP PHASE1:Hg19::chr14:91270270..91270281,-#_6daa70e850ba3cb9d61a211f1aedb9a0 | p@chr14:91270270..91270281, - |
| 4.63e-27 | FFCP PHASE2:Hg19::chr14:91270270..91270281,-#_6daa70e850ba3cb9d61a211f1aedb9a0 | p@chr14:91270270..91270281, - |
| 8.99e-27 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_104831a2297c70fd1c931fca8750a071 | p@chr3:43538305..43538325, - |
| 8.99e-27 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_104831a2297c70fd1c931fca8750a071 | p@chr3:43538305..43538325, - |
| 2.12e-25 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_7d59e46bbdc33fd8d1abfdf209ccb67e | p1@ENST00000413103 |
| 2.12e-25 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_7d59e46bbdc33fd8d1abfdf209ccb67e | p1@ENST00000413103 |
| 4.76e-25 | FFCP PHASE1:Hg19::chr11:940729..940745,+#_3f23f756ef25ea834d0b362b91095759 | p5@AP2A2 |
| 4.76e-25 | FFCP PHASE2:Hg19::chr11:940729..940745,+#_3f23f756ef25ea834d0b362b91095759 | p5@AP2A2 |
| 5.73e-25 | FFCP PHASE2:Hg19::chr19:42007093..42007107,-#_8a8d12cd3bc918aa38230a65721dfb97 | p@chr19:42007093..42007107, - |
| 5.73e-25 | FFCP PHASE1:Hg19::chr19:42007093..42007107,-#_8a8d12cd3bc918aa38230a65721dfb97 | p@chr19:42007093..42007107, - |
| 6.15e-25 | FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_c7e0fd5eaf4e43fedb46508ea08ff24f | p@chrX:128781853..128781866, - |
| 6.15e-25 | FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_c7e0fd5eaf4e43fedb46508ea08ff24f | p@chrX:128781853..128781866, - |
| 1.2e-23 | FFCP PHASE2:Hg19::chrX:128781635..128781648,-#_dcc2bb395d80256a15e0fe053bf52bbd | p@chrX:128781635..128781648, - |
| 1.2e-23 | FFCP PHASE1:Hg19::chrX:128781635..128781648,-#_dcc2bb395d80256a15e0fe053bf52bbd | p@chrX:128781635..128781648, - |
| 1.61e-23 | FFCP PHASE1:Hg19::chr17:61560490..61560500,+#_1eaa1b2d369f7f02ac1795f0d37379b9 | p@chr17:61560490..61560500, + |
| 1.61e-23 | FFCP PHASE2:Hg19::chr17:61560490..61560500,+#_1eaa1b2d369f7f02ac1795f0d37379b9 | p@chr17:61560490..61560500, + |
| 1.7e-23 | FFCP PHASE1:Hg19::chr5:55422645..55422665,-#_0aeac72f886d0bac1c2b1bd757e155b0 | p@chr5:55422645..55422665, - |
| 1.7e-23 | FFCP PHASE2:Hg19::chr5:55422645..55422665,-#_0aeac72f886d0bac1c2b1bd757e155b0 | p@chr5:55422645..55422665, - |
| 2.21e-23 | FFCP PHASE1:Hg19::chr16:66422312..66422316,+#_08076e246780c54ab7c764e2ac9f4d1d | p@chr16:66422312..66422316, + |
| 2.21e-23 | FFCP PHASE2:Hg19::chr16:66422312..66422316,+#_08076e246780c54ab7c764e2ac9f4d1d | p@chr16:66422312..66422316, + |
| 4.96e-23 | FFCP PHASE1:Hg19::chr19:4639579..4639589,+#_5f98556676c247a3d66345ff3e10e597 | p2@TNFAIP8L1 |
| 4.96e-23 | FFCP PHASE2:Hg19::chr19:4639579..4639589,+#_5f98556676c247a3d66345ff3e10e597 | p2@TNFAIP8L1 |
| 7.94e-23 | FFCP PHASE2:Hg19::chr4:55981146..55981149,-#_6dcacbbd1f151a69c5bbc15fdcc0ce7b | p@chr4:55981146..55981149, - |
| 7.94e-23 | FFCP PHASE1:Hg19::chr4:55981146..55981149,-#_6dcacbbd1f151a69c5bbc15fdcc0ce7b | p@chr4:55981146..55981149, - |
| 7.92e-22 | FFCP PHASE1:Hg19::chr16:66413317..66413328,+#_5831aea50d219c43f52f8d1b96dea982 | p1@AB385138 |
| 7.92e-22 | FFCP PHASE2:Hg19::chr16:66413317..66413328,+#_5831aea50d219c43f52f8d1b96dea982 | p1@AB385138 |
| 7.94e-22 | FFCP PHASE2:Hg19::chrX:10544929..10544941,-#_1ecc0f846a77d9f60c7810dc32a8bfe9 | p14@MID1 |
| 7.94e-22 | FFCP PHASE1:Hg19::chrX:10544929..10544941,-#_1ecc0f846a77d9f60c7810dc32a8bfe9 | p14@MID1 |
| 1.2e-21 | FFCP PHASE2:Hg19::chr19:45226115..45226126,-#_106f81ed742395fd0b8add293538e01a | p@chr19:45226115..45226126, - |
| 1.2e-21 | FFCP PHASE1:Hg19::chr19:45226115..45226126,-#_106f81ed742395fd0b8add293538e01a | p@chr19:45226115..45226126, - |
| 2.25e-21 | FFCP PHASE1:Hg19::chr17:755468..755471,+#_cf6d257440e89bf82728620d85580a8d | p@chr17:755468..755471, + |
| 2.25e-21 | FFCP PHASE2:Hg19::chr17:755468..755471,+#_cf6d257440e89bf82728620d85580a8d | p@chr17:755468..755471, + |
| 2.66e-21 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_0237559c17e3fd87f03e0f983e1ff7ed | p@chr9:139543390..139543404, + |
| 2.66e-21 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_0237559c17e3fd87f03e0f983e1ff7ed | p@chr9:139543390..139543404, + |
| 4.21e-21 | FFCP PHASE1:Hg19::chr2:26700923..26700934,-#_0571f335b8f075d363e5e76652d88788 | p9@OTOF |
| 4.21e-21 | FFCP PHASE2:Hg19::chr2:26700923..26700934,-#_0571f335b8f075d363e5e76652d88788 | p9@OTOF |
| 5.15e-21 | FFCP PHASE2:Hg19::chr19:884982..884988,-#_9d659a667d3d7e73ac3377baf91df12a | p@chr19:884982..884988, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr2:33588929..33588937,+#_9d659a667d3d7e73ac3377baf91df12a | p@chr2:33588929..33588937, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr8:40010804..40010814,+#_9d659a667d3d7e73ac3377baf91df12a | p3@C8orf4 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr13:45390377..45390382,+#_9d659a667d3d7e73ac3377baf91df12a | p@chr13:45390377..45390382, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr16:13010548..13010555,+#_9d659a667d3d7e73ac3377baf91df12a | p@chr16:13010548..13010555, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr18:74204885..74204892,-#_9d659a667d3d7e73ac3377baf91df12a | p@chr18:74204885..74204892, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr9:95737369..95737393,+#_9d659a667d3d7e73ac3377baf91df12a | p18@FGD3 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr1:52498542..52498551,-#_9d659a667d3d7e73ac3377baf91df12a | p@chr1:52498542..52498551, - |
| 5.15e-21 | FFCP PHASE2:Hg19::chr13:45390377..45390382,+#_9d659a667d3d7e73ac3377baf91df12a | p@chr13:45390377..45390382, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr3:4898478..4898486,-#_9d659a667d3d7e73ac3377baf91df12a | p1@ENST00000465436 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr18:34376781..34376791,-#_9d659a667d3d7e73ac3377baf91df12a | p@chr18:34376781..34376791, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr16:2069979..2069989,+#_9d659a667d3d7e73ac3377baf91df12a | p7@NPW |
