FFCP PHASE1:Hg19::chr19:5352533..5352545,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:5352533..5352545,+
|short_description=p@chr19:5352533..5352545,+
|description=CAGE_peak_at_chr19:5352533..5352545,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5352533..5352545,+ | |||
|description=CAGE_peak_at_chr19:5352533..5352545,+ | |||
|id=chr19:5352533..5352545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.23e-07;1!CL:1000600;2.23e-07;1!CL:0000319;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.52e-07,1;CL:1000600,2.52e-07,1;CL:0000319,5.45e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.68e-09;10!UBERON:0007687;2.68e-09;10!UBERON:0009847;3.47e-09;3!UBERON:0003353;3.47e-09;3!UBERON:0008425;3.50e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.14e-38!235;DOID:14566!4.07e-37!239;DOID:0050687!1.91e-35!143;DOID:305!9.42e-29!106;DOID:0050686!2.88e-14!137;DOID:7!1.04e-09!39;DOID:299!3.61e-08!25;DOID:171!1.50e-07!10;DOID:1749!3.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:7;5.96e-09;39!DOID:3112;3.50e-07;1!DOID:1036;3.93e-07;8!DOID:3030;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.53e-14,106;DOID:0050687,6.35e-12,143;DOID:162,2.90e-11,235;DOID:14566,6.42e-11,239;DOID:7,1.87e-10,39;DOID:3112,2.84e-07,1;DOID:1036,3.47e-07,8;DOID:3030,5.45e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.23e-07;1!UBERON:0001256;2.23e-07;1!UBERON:0001259;2.23e-07;1!UBERON:0007195;7.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.52e-07,1;UBERON:0001256,2.52e-07,1;UBERON:0001259,2.52e-07,1;UBERON:0007195,9.18e-07,1 | |||
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| ||
|short_description=p@chr19:5352533..5352545,+ | |||
}} | }} |
Latest revision as of 16:56, 27 July 2015
Short description: | p@chr19:5352533..5352545, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5352533..5352545, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.52e-07 | 1 |
lower urinary tract cell | 2.52e-07 | 1 |
mucus secreting cell | 5.45e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.52e-07 | 1 |
wall of urinary bladder | 2.52e-07 | 1 |
mucosa of urinary bladder | 2.52e-07 | 1 |
stroma of bone marrow | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.53e-14 | 106 |
cell type cancer | 6.35e-12 | 143 |
cancer | 2.90e-11 | 235 |
disease of cellular proliferation | 6.42e-11 | 239 |
disease of anatomical entity | 1.87e-10 | 39 |
papillary adenocarcinoma | 2.84e-07 | 1 |
chronic leukemia | 3.47e-07 | 8 |
mucinous adenocarcinoma | 5.45e-07 | 1 |