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{{UBERON
{{UBERON
|id=UBERON:0000158
|alt_id=
|name=membranous layer
|namespace=
|def=
|xref=FMA:82500
|is_a=UBERON:0004923
|synonym="membranous organ component" EXACT [FMA:82500]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000158
|is_a=UBERON:0004923
|is_obsolete=
|located_in=
|located_in=
|name=membranous layer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="membranous organ component" EXACT [FMA:82500]
|union_of=
|xref=FMA:82500
}}
}}

Latest revision as of 17:06, 12 September 2014

Name:membranous layer
Namespace:FANTOM
Xrefs:
links:
FMA:82500
Synonyms: "membranous organ component" EXACT [FMA:82500]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004923(organ component layer)



Children

is a:UBERON:0005631 (extraembryonic membrane)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000158 (membranous layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.64e-155FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_3c425cd77a5d4eec65a64a3e56c301f7p1@ENST00000469806
7.64e-155FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_3c425cd77a5d4eec65a64a3e56c301f7p1@ENST00000469806
6.02e-144FFCP PHASE2:Hg19::chr11:8857295..8857310,-#_8e80d50f9ffc79dec8c22f05fee23f3bp21@ST5
6.02e-144FFCP PHASE1:Hg19::chr11:8857295..8857310,-#_8e80d50f9ffc79dec8c22f05fee23f3bp21@ST5
7.71e-144FFCP PHASE2:Hg19::chr11:8857248..8857269,-#_60ac5accc779cf6e9cd81e4858d1b81dp16@ST5
7.71e-144FFCP PHASE1:Hg19::chr11:8857248..8857269,-#_60ac5accc779cf6e9cd81e4858d1b81dp16@ST5
6.53e-141FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_04e391b7aa7f046fa990428628b5a5cap@chr2:237683156..237683171, +
6.53e-141FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_04e391b7aa7f046fa990428628b5a5cap@chr2:237683156..237683171, +
1.35e-139FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_5cbbad8196f8b6333da07c8481aac010p@chr19:36592982..36592993, +
1.35e-139FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_5cbbad8196f8b6333da07c8481aac010p@chr19:36592982..36592993, +
1.05e-134FFCP PHASE2:Hg19::chr11:8857215..8857232,-#_d1ae7e30f6964b1b4c90c7d29d747519p17@ST5
1.05e-134FFCP PHASE1:Hg19::chr11:8857215..8857232,-#_d1ae7e30f6964b1b4c90c7d29d747519p17@ST5
1.43e-129FFCP PHASE1:Hg19::chr15:68344995..68345013,+#_e6e349dd2d864751ceabbe63a756cb11p@chr15:68344995..68345013, +
1.43e-129FFCP PHASE2:Hg19::chr15:68344995..68345013,+#_e6e349dd2d864751ceabbe63a756cb11p@chr15:68344995..68345013, +
1.6e-126FFCP PHASE2:Hg19::chr2:237683212..237683239,+#_6997e99daf63f306087a95b20dd87b7ap@chr2:237683212..237683239, +
1.6e-126FFCP PHASE1:Hg19::chr2:237683212..237683239,+#_6997e99daf63f306087a95b20dd87b7ap@chr2:237683212..237683239, +
1.01e-125FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_723b4298c10cf2bb000fdf9907f8ed12p14@DTNB
1.01e-125FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_723b4298c10cf2bb000fdf9907f8ed12p14@DTNB
6.97e-121FFCP PHASE1:Hg19::chr2:237682954..237682971,+#_9b65f2012dccd4c07c1898ffc903d80fp@chr2:237682954..237682971, +
6.97e-121FFCP PHASE2:Hg19::chr2:237682954..237682971,+#_9b65f2012dccd4c07c1898ffc903d80fp@chr2:237682954..237682971, +
8.75e-121FFCP PHASE2:Hg19::chr2:237682990..237683009,+#_aade5739745d6e386b9cc8914ee42959p@chr2:237682990..237683009, +
8.75e-121FFCP PHASE1:Hg19::chr2:237682990..237683009,+#_aade5739745d6e386b9cc8914ee42959p@chr2:237682990..237683009, +
8.22e-119FFCP PHASE2:Hg19::chr19:36592925..36592948,+#_5e0964c247e8ec1853a0472b073263c9p@chr19:36592925..36592948, +
8.22e-119FFCP PHASE1:Hg19::chr19:36592925..36592948,+#_5e0964c247e8ec1853a0472b073263c9p@chr19:36592925..36592948, +
2.31e-113FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_6396c80ab9d233e609bf57e76b3b1658p@chr18:6286777..6286797, +
2.31e-113FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_6396c80ab9d233e609bf57e76b3b1658p@chr18:6286777..6286797, +
7.03e-112FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_3d5425fdcf0cf4863e2d731568e68027p13@SGSM2
7.03e-112FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_3d5425fdcf0cf4863e2d731568e68027p@chr2:237683203..237683210, +
7.03e-112FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_3d5425fdcf0cf4863e2d731568e68027p13@SGSM2
7.03e-112FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_3d5425fdcf0cf4863e2d731568e68027p@chr2:237683203..237683210, +
7.87e-108FFCP PHASE1:Hg19::chr11:1946293..1946319,+#_9413bbcad3087c3a188fe991f9eaba06p11@TNNT3
7.87e-108FFCP PHASE2:Hg19::chr11:1946293..1946319,+#_9413bbcad3087c3a188fe991f9eaba06p11@TNNT3
3.01e-103FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_0924d918ae2d58568352c2f5c258ea79p@chr6:12161831..12161855, +
3.01e-103FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_0924d918ae2d58568352c2f5c258ea79p@chr6:12161831..12161855, +
4.29e-103FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_1570b50229ed3ec0b1a7265ad1d3567bp4@SLCO4A1
4.29e-103FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_1570b50229ed3ec0b1a7265ad1d3567bp4@SLCO4A1
4.86e-100FFCP PHASE1:Hg19::chr13:43636294..43636306,+#_5e7b68474f199fa15e7132723a3834d1p@chr13:43636294..43636306, +
4.86e-100FFCP PHASE2:Hg19::chr13:43636294..43636306,+#_5e7b68474f199fa15e7132723a3834d1p@chr13:43636294..43636306, +
1.22e-99FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_89889b05eae5362fa1c5f2707b07650cp@chr19:36592910..36592917, +
1.22e-99FFCP PHASE2:Hg19::chr10:134227398..134227410,+#_89889b05eae5362fa1c5f2707b07650cp@chr10:134227398..134227410, +
1.22e-99FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_89889b05eae5362fa1c5f2707b07650cp@chr19:36592910..36592917, +
1.22e-99FFCP PHASE1:Hg19::chr10:134227398..134227410,+#_89889b05eae5362fa1c5f2707b07650cp@chr10:134227398..134227410, +
1.38e-99FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_fb7afb04129d06970ca06f63bbebf51fp@chr2:191897854..191897865, -
1.38e-99FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_fb7afb04129d06970ca06f63bbebf51fp@chr2:191897854..191897865, -
1.57e-99FFCP PHASE1:Hg19::chr17:2278481..2278491,+#_229489ef64eb71a3702350f1fd9d75b0p14@SGSM2
1.57e-99FFCP PHASE2:Hg19::chr17:2278481..2278491,+#_229489ef64eb71a3702350f1fd9d75b0p14@SGSM2
2.03e-99FFCP PHASE1:Hg19::chr6:31083761..31083775,-#_ba794eb495606e35f04e2645aadce662p@chr6:31083761..31083775, -
2.03e-99FFCP PHASE2:Hg19::chr6:31083761..31083775,-#_ba794eb495606e35f04e2645aadce662p@chr6:31083761..31083775, -
2.63e-99FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_2a06819d3a6182bee9fdd5cdf0812f2fp@chr2:237682972..237682977, +
2.63e-99FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_2a06819d3a6182bee9fdd5cdf0812f2fp@chr2:237682972..237682977, +
4.6e-98FFCP PHASE2:Hg19::chr20:61288249..61288259,+#_776c0035e564eaa785d9fa5430a26327p12@SLCO4A1
4.6e-98FFCP PHASE1:Hg19::chr20:61288222..61288232,+#_776c0035e564eaa785d9fa5430a26327p14@SLCO4A1
4.6e-98FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_776c0035e564eaa785d9fa5430a26327p@chr14:104202639..104202646, -
4.6e-98FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_776c0035e564eaa785d9fa5430a26327p@chr9:88126069..88126080, -
4.6e-98FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_776c0035e564eaa785d9fa5430a26327p@chr10:131344593..131344605, +
4.6e-98FFCP PHASE1:Hg19::chr20:61288249..61288259,+#_776c0035e564eaa785d9fa5430a26327p12@SLCO4A1
4.6e-98FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_776c0035e564eaa785d9fa5430a26327p@chrX:48374277..48374289, +
4.6e-98FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_776c0035e564eaa785d9fa5430a26327p@chr10:131344593..131344605, +
4.6e-98FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_776c0035e564eaa785d9fa5430a26327p@chr9:88126069..88126080, -
4.6e-98FFCP PHASE2:Hg19::chr20:61288222..61288232,+#_776c0035e564eaa785d9fa5430a26327p14@SLCO4A1
4.6e-98FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_776c0035e564eaa785d9fa5430a26327p@chr14:104202639..104202646, -
4.6e-98FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_776c0035e564eaa785d9fa5430a26327p@chrX:48374277..48374289, +
1.4e-94FFCP PHASE1:Hg19::chr17:38875395..38875406,-#_8534854ad8e5a44066bca6d5393686cbp2@KRT223P
1.4e-94FFCP PHASE2:Hg19::chr17:38875395..38875406,-#_8534854ad8e5a44066bca6d5393686cbp2@KRT223P
7.56e-90FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_87d3e2c1319e548e8b69ed13429f5f2dp@chr19:36592959..36592975, +
7.56e-90FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_87d3e2c1319e548e8b69ed13429f5f2dp@chr19:36592959..36592975, +
1.9e-89FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_12e150aed405342813c0f09e14c60ae9p@chr2:237683038..237683048, +
1.9e-89FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_12e150aed405342813c0f09e14c60ae9p@chr2:237683038..237683048, +
1.43e-88FFCP PHASE2:Hg19::chr5:128301279..128301283,+#_5944c8853bb8e4e0064c267e39a31002p5@SLC27A6
1.43e-88FFCP PHASE1:Hg19::chr5:128301279..128301283,+#_5944c8853bb8e4e0064c267e39a31002p5@SLC27A6
1.36e-87FFCP PHASE1:Hg19::chr17:38875358..38875392,-#_08e58abfe2904fcd4931da5420373b2ap1@KRT223P
1.36e-87FFCP PHASE2:Hg19::chr17:38875358..38875392,-#_08e58abfe2904fcd4931da5420373b2ap1@KRT223P
2.47e-87FFCP PHASE1:Hg19::chr11:1949886..1949907,+#_73e425dc138174ee0f69bc2301b94bd3p@chr11:1949886..1949907, +
2.47e-87FFCP PHASE2:Hg19::chr11:1949886..1949907,+#_73e425dc138174ee0f69bc2301b94bd3p@chr11:1949886..1949907, +
2.93e-87FFCP PHASE2:Hg19::chr1:147232669..147232676,-#_41a397fe07b0ec1c8ebb2eb07c81deb3p4@GJA5
2.93e-87FFCP PHASE1:Hg19::chr1:147232669..147232676,-#_41a397fe07b0ec1c8ebb2eb07c81deb3p4@GJA5
8.19e-87FFCP PHASE2:Hg19::chr11:122288906..122288919,-#_dfe71c9246ade0901913302e6dfdc988p@chr11:122288906..122288919, -
8.19e-87FFCP PHASE1:Hg19::chr11:122288906..122288919,-#_dfe71c9246ade0901913302e6dfdc988p@chr11:122288906..122288919, -
1.58e-86FFCP PHASE2:Mm9::chr11:55223511..55223524,-#_3ee816ccb6e15afa75c10e25f34371a1p@chr11:55223511..55223524, -
1.58e-86FFCP PHASE1:Mm9::chr13:61041994..61042014,-#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:61041994..61042014, -
1.58e-86FFCP PHASE2:Mm9::chr13:27337674..27337690,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:27337674..27337690, +
1.58e-86FFCP PHASE1:Mm9::chr13:27335609..27335622,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:27335609..27335622, +
1.58e-86FFCP PHASE1:Mm9::chrX:141915185..141915200,-#_3ee816ccb6e15afa75c10e25f34371a1p@chrX:141915185..141915200, -
1.58e-86FFCP PHASE2:Mm9::chr13:27288509..27288515,+#_3ee816ccb6e15afa75c10e25f34371a1p1@Prl3c1
1.58e-86FFCP PHASE1:Mm9::chrX:136335520..136335531,+#_3ee816ccb6e15afa75c10e25f34371a1p4@Cldn2
1.58e-86FFCP PHASE2:Mm9::chr6:97907033..97907043,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr6:97907033..97907043, +
1.58e-86FFCP PHASE2:Mm9::chrX:136335482..136335502,+#_3ee816ccb6e15afa75c10e25f34371a1p3@Cldn2
1.58e-86FFCP PHASE1:Mm9::chr13:61105387..61105403,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:61105387..61105403, +
1.58e-86FFCP PHASE1:Mm9::chr7:17788842..17788851,+#_3ee816ccb6e15afa75c10e25f34371a1p2@Psg29
1.58e-86FFCP PHASE2:Mm9::chr13:27339701..27339760,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:27339701..27339760, +
1.58e-86FFCP PHASE1:Mm9::chr1:63260883..63260896,-#_3ee816ccb6e15afa75c10e25f34371a1p3@Gpr1
1.58e-86FFCP PHASE1:Mm9::chr13:33048652..33048685,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:33048652..33048685, +
1.58e-86FFCP PHASE1:Mm9::chr13:27288509..27288515,+#_3ee816ccb6e15afa75c10e25f34371a1p1@Prl3c1
1.58e-86FFCP PHASE1:Mm9::chr1:193090931..193090940,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr1:193090931..193090940, +
1.58e-86FFCP PHASE2:Mm9::chr7:17788842..17788851,+#_3ee816ccb6e15afa75c10e25f34371a1p2@Psg29
1.58e-86FFCP PHASE1:Mm9::chr6:145765021..145765041,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr6:145765021..145765041, +
1.58e-86FFCP PHASE2:Mm9::chr9:111108246..111108253,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr9:111108246..111108253, +
1.58e-86FFCP PHASE2:Mm9::chr13:33048652..33048685,+#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:33048652..33048685, +
1.58e-86FFCP PHASE2:Mm9::chrX:136335507..136335518,+#_3ee816ccb6e15afa75c10e25f34371a1p5@Cldn2
1.58e-86FFCP PHASE2:Mm9::chr13:61041994..61042014,-#_3ee816ccb6e15afa75c10e25f34371a1p@chr13:61041994..61042014, -

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