FFCP PHASE1:Hg19::chrX:9880874..9880884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZC6,B3KU73 | |UniProt=C9IZC6,B3KU73 | ||
|association_with_transcript=151bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | |association_with_transcript=151bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | ||
|cluster_id=chrX:9880874..9880884,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_14_at_SHROOM2_5end | |description=CAGE_peak_14_at_SHROOM2_5end | ||
|id=chrX:9880874..9880884,+ | |id=chrX:9880874..9880884,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.45e-40;2!CL:1001319;4.22e-21;1!CL:1000600;4.22e-21;1!CL:0000307;6.34e-08;3!CL:0002319;3.09e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.97e-23,8;CL:1001319,4.22e-21,1;CL:1000600,4.22e-21,1;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3;CL:0002319,2.96e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002581;4.22e-21;1!UBERON:0004645;4.22e-21;1!UBERON:0001256;4.22e-21;1!UBERON:0001259;4.22e-21;1!UBERON:0001872;8.13e-17;5!UBERON:0001255;3.02e-11;2!UBERON:0001556;3.02e-11;2!UBERON:0002106;4.52e-08;3!UBERON:0002114;6.34e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.22e-21,1;UBERON:0001256,4.22e-21,1;UBERON:0001259,4.22e-21,1;UBERON:0002581,5.16e-21,1;UBERON:0001872,8.14e-17,5;UBERON:0001255,3.02e-11,2;UBERON:0001556,3.02e-11,2;UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3;UBERON:0002114,5.18e-08,2 | |||
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| ||
|short_description=p14@SHROOM2 | |short_description=p14@SHROOM2 | ||
}} | }} |
Latest revision as of 15:43, 16 September 2015
Short description: | p14@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SHROOM2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 151bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | C9IZC6B3KU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.97e-23 | 8 |
bladder cell | 4.22e-21 | 1 |
lower urinary tract cell | 4.22e-21 | 1 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
neural cell | 2.96e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.22e-21 | 1 |
wall of urinary bladder | 4.22e-21 | 1 |
mucosa of urinary bladder | 4.22e-21 | 1 |
postcentral gyrus | 5.16e-21 | 1 |
parietal lobe | 8.14e-17 | 5 |
urinary bladder | 3.02e-11 | 2 |
lower urinary tract | 3.02e-11 | 2 |
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
duodenum | 5.18e-08 | 2 |