FFCP PHASE1:Hg19::chrX:46404797..46404810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401588 | |EntrezGene=401588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000421685,NR_015378_5end | |association_with_transcript=-117bp_to_ENST00000421685,NR_015378_5end | ||
|cluster_id=chrX:46404797..46404810,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_LOC401588_5end | |description=CAGE_peak_3_at_LOC401588_5end | ||
|id=chrX:46404797..46404810,+ | |id=chrX:46404797..46404810,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.63e-26!42;CL:0000860!6.87e-25!45;CL:0002009!1.65e-16!65;CL:0000766!3.89e-16!76;CL:0000557!3.95e-16!71;CL:0002194!2.58e-15!63;CL:0000576!2.58e-15!63;CL:0000040!2.58e-15!63;CL:0000559!2.58e-15!63;CL:0000839!1.64e-14!70;CL:0000048!3.97e-14!430;CL:0000034!7.87e-14!444;CL:0000723!1.59e-13!436;CL:0000012!1.42e-12!682;CL:0000548!2.34e-12!679;CL:0000004!2.34e-12!679;CL:0000255!2.34e-12!679;CL:0000144!1.17e-11!625;CL:0000738!5.89e-11!140;CL:0000134!6.07e-11!358;CL:0002320!1.34e-10!365;CL:0002371!1.90e-10!591;CL:0000003!3.17e-10!722;CL:0000219!2.85e-09!390;CL:0002087!1.04e-08!119;CL:0000763!1.33e-08!112;CL:0000049!1.33e-08!112;CL:0002031!1.51e-08!124;CL:0000063!1.19e-07!578;CL:0000037!5.21e-07!172;CL:0000566!5.21e-07!172 | |ontology_enrichment_celltype=CL:0002057!6.63e-26!42;CL:0000860!6.87e-25!45;CL:0002009!1.65e-16!65;CL:0000766!3.89e-16!76;CL:0000557!3.95e-16!71;CL:0002194!2.58e-15!63;CL:0000576!2.58e-15!63;CL:0000040!2.58e-15!63;CL:0000559!2.58e-15!63;CL:0000839!1.64e-14!70;CL:0000048!3.97e-14!430;CL:0000034!7.87e-14!444;CL:0000723!1.59e-13!436;CL:0000012!1.42e-12!682;CL:0000548!2.34e-12!679;CL:0000004!2.34e-12!679;CL:0000255!2.34e-12!679;CL:0000144!1.17e-11!625;CL:0000738!5.89e-11!140;CL:0000134!6.07e-11!358;CL:0002320!1.34e-10!365;CL:0002371!1.90e-10!591;CL:0000003!3.17e-10!722;CL:0000219!2.85e-09!390;CL:0002087!1.04e-08!119;CL:0000763!1.33e-08!112;CL:0000049!1.33e-08!112;CL:0002031!1.51e-08!124;CL:0000063!1.19e-07!578;CL:0000037!5.21e-07!172;CL:0000566!5.21e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.57e-66;33!CL:0002057;3.57e-66;33!CL:0000473;6.49e-46;39!CL:0000234;6.49e-46;39!CL:0000576;5.30e-36;48!CL:0000766;9.07e-25;69!CL:0002087;7.26e-11;104!CL:0000763;1.54e-10;100!CL:0000767;2.18e-09;3!CL:0000738;6.99e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.36e-68,42;CL:0002057,1.36e-68,42;CL:0000473,7.39e-59,48;CL:0000234,7.39e-59,48;CL:0000766,4.25e-49,72;CL:0002009,1.78e-46,61;CL:0002194,3.06e-45,59;CL:0000576,3.06e-45,59;CL:0000040,3.06e-45,59;CL:0000559,3.06e-45,59;CL:0000557,2.35e-44,67;CL:0000839,2.57e-42,66;CL:0000763,2.22e-31,108;CL:0000049,2.22e-31,108;CL:0000738,1.84e-30,136;CL:0002031,9.04e-27,120;CL:0002087,1.41e-26,115;CL:0002032,1.20e-22,161;CL:0000837,1.20e-22,161;CL:0000037,1.48e-22,168;CL:0000988,7.51e-21,177;CL:0000134,7.36e-12,354;CL:0002320,2.20e-11,361;CL:0000219,2.36e-10,386;CL:0000048,3.80e-10,427;CL:0000034,4.75e-10,441;CL:0000723,8.05e-10,433;CL:0000767,1.31e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.31e-51;42!CL:0000049;8.70e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-16!80;UBERON:0001474!3.03e-15!86;UBERON:0004765!6.55e-12!101;UBERON:0001434!6.55e-12!101;UBERON:0002390!1.60e-11!102;UBERON:0003061!1.60e-11!102;UBERON:0002204!6.42e-11!167;UBERON:0002384!1.55e-09!375;UBERON:0002193!2.06e-09!112;UBERON:0003081!3.47e-09!216;UBERON:0002405!5.50e-09!115;UBERON:0000926!2.85e-07!448;UBERON:0004120!2.85e-07!448;UBERON:0006603!2.85e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!2.79e-16!80;UBERON:0001474!3.03e-15!86;UBERON:0004765!6.55e-12!101;UBERON:0001434!6.55e-12!101;UBERON:0002390!1.60e-11!102;UBERON:0003061!1.60e-11!102;UBERON:0002204!6.42e-11!167;UBERON:0002384!1.55e-09!375;UBERON:0002193!2.06e-09!112;UBERON:0003081!3.47e-09!216;UBERON:0002405!5.50e-09!115;UBERON:0000926!2.85e-07!448;UBERON:0004120!2.85e-07!448;UBERON:0006603!2.85e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.80e-38,76;UBERON:0001474,1.33e-34,82;UBERON:0004765,1.01e-30,90;UBERON:0002405,1.93e-29,93;UBERON:0002390,2.42e-29,98;UBERON:0003061,2.42e-29,98;UBERON:0001434,9.55e-27,100;UBERON:0002193,9.14e-26,108;UBERON:0003081,1.09e-17,203;UBERON:0002204,1.38e-16,167;UBERON:0002384,9.78e-11,371;UBERON:0000926,1.77e-09,315;UBERON:0004120,1.77e-09,315;UBERON:0006603,1.77e-09,315 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0.0787107813136792,3.93364276848904,1.91914699048606,2.94150634300544,0,0,0,0.0774672005803016,0,0.293600439334847,4.9859586767869,6.01633342410425,6.51032612147556,0,0,0,0.581592955118259,1.88937971844405,1.4555043671269,2.55671940596253,8.63452564845834,12.078548464909,4.02769349251011,5.12321413058201,6.14853797710322,28.958637181876,26.4648720269369,32.502356782642,3.9530891303947,3.82068610080984,6.06753408001728,13.7737751566906,14.7627352455003,30.0488449125549,1.31940520074686,1.39624560335142,1.70489900213078,15.0908804086864,12.4824749432051,19.3074897188628,9.04495194924276,17.7304192262868,13.6828972164223,10.2917915447673,19.1504370713534,22.1523671208619,0.211255286311942,0.850417199860174,0,0.44931452458598,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0.786839080455332,0.393010762749165,0.822405995998037,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.444859689486181,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.00803371612366,1.33720097891754,0.289648807765598,2.43806866313962,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,1.89853131913626,0.366403487860815,0,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0.468642863667593,0.936480230490962,0.570471821544449,0.597794722207204,0.352303495931295,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.515262646192195,0,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0,0.503760491138201,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.220587945464788,0.435758888184812,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,1.29271715757778,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,1.18218456121156,1.2937654491571,0.77005821767849,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,1.10621501125022,0.173767228936166,0,0,0.413536052245775,0.862856803274467,1.81436848265855,0.606255142892519,0,0,0.248107807818777,0,0,0,0,0,0,0.462629081407967,1.59805552781814,0.410635780069046,0,0.697262270759755,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0.275673144969061,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0.606547444719948,0,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0,0,0.551365343546124,1.99031692572366,0,0.578775534266688,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,1.1249555075237,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,2.18502341580683,0,0,0,0.063186579628488,2.25485129121739,0.518440956986236,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0.261177619741208,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0.970817393606503,0,0,0.596143835108969,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0.550157746388935,0.415440338029185,0.674921674654501,2.32140586367385,0,0,0,0.0524545881349981,0.105600336519406,0,1.15149118391667,0.714695326373367,0,0,0,0,0.979762080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| ||
|short_description=p3@LOC401588 | |short_description=p3@LOC401588 | ||
}} | }} |
Latest revision as of 04:42, 25 September 2015
Short description: | p3@LOC401588 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC401588_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -117bp_to_ENST00000421685, NR_015378_5end |
EntrezGene: | LOC401588 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.36e-68 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-68 | 42 |
defensive cell | 7.39e-59 | 48 |
phagocyte | 7.39e-59 | 48 |
myeloid leukocyte | 4.25e-49 | 72 |
macrophage dendritic cell progenitor | 1.78e-46 | 61 |
monopoietic cell | 3.06e-45 | 59 |
monocyte | 3.06e-45 | 59 |
monoblast | 3.06e-45 | 59 |
promonocyte | 3.06e-45 | 59 |
granulocyte monocyte progenitor cell | 2.35e-44 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-42 | 66 |
myeloid cell | 2.22e-31 | 108 |
common myeloid progenitor | 2.22e-31 | 108 |
leukocyte | 1.84e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 9.04e-27 | 120 |
nongranular leukocyte | 1.41e-26 | 115 |
hematopoietic oligopotent progenitor cell | 1.20e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-22 | 161 |
hematopoietic stem cell | 1.48e-22 | 168 |
hematopoietic cell | 7.51e-21 | 177 |
mesenchymal cell | 7.36e-12 | 354 |
connective tissue cell | 2.20e-11 | 361 |
motile cell | 2.36e-10 | 386 |
multi fate stem cell | 3.80e-10 | 427 |
stem cell | 4.75e-10 | 441 |
somatic stem cell | 8.05e-10 | 433 |
basophil | 1.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.80e-38 | 76 |
bone element | 1.33e-34 | 82 |
skeletal element | 1.01e-30 | 90 |
immune system | 1.93e-29 | 93 |
hematopoietic system | 2.42e-29 | 98 |
blood island | 2.42e-29 | 98 |
skeletal system | 9.55e-27 | 100 |
hemolymphoid system | 9.14e-26 | 108 |
lateral plate mesoderm | 1.09e-17 | 203 |
musculoskeletal system | 1.38e-16 | 167 |
connective tissue | 9.78e-11 | 371 |
mesoderm | 1.77e-09 | 315 |
mesoderm-derived structure | 1.77e-09 | 315 |
presumptive mesoderm | 1.77e-09 | 315 |