FFCP PHASE1:Hg19::chrX:25540398..25540420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:25540398..25540420,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chrX:25540398..25540420,+ | |description=CAGE_peak_at_chrX:25540398..25540420,+ | ||
|id=chrX:25540398..25540420,+ | |id=chrX:25540398..25540420,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;4.89e-09;2!CL:0000137;4.89e-09;2!CL:0000092;4.89e-09;2!CL:0002092;4.81e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.08e-09,2;CL:0000137,5.08e-09,2;CL:0000092,5.08e-09,2;CL:0002092,4.96e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.27e-10!235;DOID:14566!8.47e-10!239;DOID:0060085!1.41e-08!1;DOID:3165!1.41e-08!1;DOID:0060121!1.41e-08!1;DOID:2438!1.41e-08!1;DOID:4418!1.41e-08!1;DOID:4960!1.88e-08!1;DOID:0070004!1.88e-08!1;DOID:0050687!5.21e-08!143 | |ontology_enrichment_disease=DOID:162!4.27e-10!235;DOID:14566!8.47e-10!239;DOID:0060085!1.41e-08!1;DOID:3165!1.41e-08!1;DOID:0060121!1.41e-08!1;DOID:2438!1.41e-08!1;DOID:4418!1.41e-08!1;DOID:4960!1.88e-08!1;DOID:0070004!1.88e-08!1;DOID:0050687!5.21e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:0060085;9.57e-17;1!DOID:3165;9.57e-17;1!DOID:0060121;9.57e-17;1!DOID:2438;9.57e-17;1!DOID:4418;9.57e-17;1!DOID:4960;1.78e-16;1!DOID:0070004;1.78e-16;1!DOID:200;4.89e-09;2!DOID:1909;4.89e-09;2!DOID:4305;4.89e-09;2!DOID:3910;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.04e-16,1;DOID:3165,1.04e-16,1;DOID:0060121,1.04e-16,1;DOID:2438,1.04e-16,1;DOID:4418,1.04e-16,1;DOID:4960,1.93e-16,1;DOID:0070004,1.93e-16,1;DOID:1909,4.70e-09,2;DOID:200,5.08e-09,2;DOID:4305,5.08e-09,2;DOID:3910,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007195!2.02e-08!1;UBERON:0001282!3.33e-08!1;UBERON:0009842!3.33e-08!1;UBERON:0003704!3.33e-08!1;UBERON:0001171!3.33e-08!1;UBERON:0001172!3.33e-08!1 | |ontology_enrichment_uberon=UBERON:0007195!2.02e-08!1;UBERON:0001282!3.33e-08!1;UBERON:0009842!3.33e-08!1;UBERON:0003704!3.33e-08!1;UBERON:0001171!3.33e-08!1;UBERON:0001172!3.33e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.78e-16;1!UBERON:0002371;4.78e-12;12!UBERON:0004903;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0001474;3.19e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.25e-16,1;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2 | |||
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|short_description=p@chrX:25540398..25540420,+ | |short_description=p@chrX:25540398..25540420,+ | ||
}} | }} |
Latest revision as of 07:39, 1 August 2015
Short description: | p@chrX:25540398..25540420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:25540398..25540420, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.08e-09 | 2 |
osteocyte | 5.08e-09 | 2 |
osteoclast | 5.08e-09 | 2 |
bone marrow cell | 4.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.25e-16 | 1 |
bronchoalveolar duct junction | 5.94e-09 | 2 |
alveolar duct | 5.94e-09 | 2 |
bronchiole | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.04e-16 | 1 |
skin benign neoplasm | 1.04e-16 | 1 |
integumentary system benign neoplasm | 1.04e-16 | 1 |
dermis tumor | 1.04e-16 | 1 |
cutaneous fibrous histiocytoma | 1.04e-16 | 1 |
bone marrow cancer | 1.93e-16 | 1 |
myeloma | 1.93e-16 | 1 |
melanoma | 4.70e-09 | 2 |
giant cell tumor | 5.08e-09 | 2 |
bone giant cell tumor | 5.08e-09 | 2 |
lung adenocarcinoma | 5.94e-09 | 2 |