FFCP PHASE1:Hg19::chrX:1734001..1734019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=438 | |EntrezGene=438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=750 | |HGNC=750 | ||
|TSSclassifier=strong | |||
|UniProt=P46597 | |UniProt=P46597 | ||
|association_with_transcript=-6bp_to_NM_001171039,uc004cqe.2_5end | |association_with_transcript=-6bp_to_NM_001171039,uc004cqe.2_5end | ||
|cluster_id=chrX:1734001..1734019,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_4_at_ASMT_5end | |description=CAGE_peak_4_at_ASMT_5end | ||
|id=chrX:1734001..1734019,+ | |id=chrX:1734001..1734019,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:0000540!2.85e-14!6;CL:0000031!2.85e-14!6;CL:0000404!2.85e-14!6;CL:0000047!5.98e-11!8;CL:0002319!2.71e-07!25 | |ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:0000540!2.85e-14!6;CL:0000031!2.85e-14!6;CL:0000404!2.85e-14!6;CL:0000047!5.98e-11!8;CL:0002319!2.71e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3!UBERON:0006238;2.63e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.99e-41!2;UBERON:0002757!3.99e-41!2;UBERON:0010134!3.99e-41!2;UBERON:0002784!3.99e-41!2;UBERON:0005408!3.99e-41!2;UBERON:0001899!3.99e-41!2;UBERON:0003296!3.82e-21!4;UBERON:0010133!3.82e-21!4;UBERON:0001894!1.59e-12!7;UBERON:0006222!1.59e-12!7;UBERON:0002148!4.52e-11!2;UBERON:0009662!4.52e-11!2;UBERON:0001017!1.78e-08!82;UBERON:0005743!4.40e-08!86;UBERON:0000988!8.29e-08!3;UBERON:0006331!8.29e-08!3;UBERON:0000073!2.56e-07!94;UBERON:0001016!2.56e-07!94 | |ontology_enrichment_uberon=UBERON:0001905!3.99e-41!2;UBERON:0002757!3.99e-41!2;UBERON:0010134!3.99e-41!2;UBERON:0002784!3.99e-41!2;UBERON:0005408!3.99e-41!2;UBERON:0001899!3.99e-41!2;UBERON:0003296!3.82e-21!4;UBERON:0010133!3.82e-21!4;UBERON:0001894!1.59e-12!7;UBERON:0006222!1.59e-12!7;UBERON:0002148!4.52e-11!2;UBERON:0009662!4.52e-11!2;UBERON:0001017!1.78e-08!82;UBERON:0005743!4.40e-08!86;UBERON:0000988!8.29e-08!3;UBERON:0006331!8.29e-08!3;UBERON:0000073!2.56e-07!94;UBERON:0001016!2.56e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43!UBERON:0000955;6.07e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p4@ASMT | |short_description=p4@ASMT | ||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p4@ASMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASMT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -6bp_to_NM_001171039, uc004cqe.2_5end |
EntrezGene: | ASMT |
HGNC: | 750 |
UniProt: | P46597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |