FFCP PHASE1:Hg19::chr9:137620548..137620598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137620548..137620598,- | |||
|coexpression_cluster_id=C396 | |coexpression_cluster_id=C396 | ||
|description=CAGE_peak_at_chr9:137620548..137620598,- | |description=CAGE_peak_at_chr9:137620548..137620598,- | ||
|id=chr9:137620548..137620598,- | |id=chr9:137620548..137620598,- | ||
|ontology_enrichment_celltype=CL:0000055!5.02e-28!180;CL:0000057!6.24e-16!75;CL:0000183!4.36e-13!59;CL:0000680!3.47e-12!57;CL:0000056!3.47e-12!57;CL:0000355!3.47e-12!57;CL:0000187!1.60e-11!54;CL:0000144!1.83e-11!625;CL:0002371!4.47e-10!591;CL:0000393!7.01e-10!60;CL:0000211!7.01e-10!60;CL:0000192!8.24e-10!42;CL:0000514!8.24e-10!42;CL:0000548!1.11e-09!679;CL:0000004!1.11e-09!679;CL:0000255!1.11e-09!679;CL:0000222!1.32e-09!119;CL:0000012!2.81e-09!682;CL:0000048!3.16e-09!430;CL:0000723!1.18e-08!436;CL:0000034!4.36e-08!444;CL:0002334!9.99e-08!12;CL:0000359!3.96e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.02e-28!180;CL:0000057!6.24e-16!75;CL:0000183!4.36e-13!59;CL:0000680!3.47e-12!57;CL:0000056!3.47e-12!57;CL:0000355!3.47e-12!57;CL:0000187!1.60e-11!54;CL:0000144!1.83e-11!625;CL:0002371!4.47e-10!591;CL:0000393!7.01e-10!60;CL:0000211!7.01e-10!60;CL:0000192!8.24e-10!42;CL:0000514!8.24e-10!42;CL:0000548!1.11e-09!679;CL:0000004!1.11e-09!679;CL:0000255!1.11e-09!679;CL:0000222!1.32e-09!119;CL:0000012!2.81e-09!682;CL:0000048!3.16e-09!430;CL:0000723!1.18e-08!436;CL:0000034!4.36e-08!444;CL:0002334!9.99e-08!12;CL:0000359!3.96e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.90e-19;19!CL:0000134;2.59e-13;55!CL:0000048;4.69e-12;58!CL:0000723;6.19e-11;61!CL:0002334;6.04e-09;12!CL:0002569;5.43e-08;6!CL:0000034;1.57e-07;69!CL:0002570;2.25e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.02e-18,19;CL:0000057,2.19e-14,76;CL:0000048,5.82e-13,427;CL:0000723,2.43e-12,433;CL:0000034,1.51e-11,441;CL:0002334,7.79e-09,12;CL:0002320,8.09e-09,361;CL:0000134,2.98e-08,354;CL:0002569,4.89e-08,6;CL:0002570,1.55e-07,8;CL:0000219,2.09e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.41e-11!63;UBERON:0001015!1.41e-11!63;UBERON:0000383!1.41e-11!63;UBERON:0001134!2.33e-11!61;UBERON:0002036!2.33e-11!61;UBERON:0003082!2.33e-11!61;UBERON:0000478!2.61e-11!24;UBERON:0000914!1.73e-10!83;UBERON:0002329!1.73e-10!83;UBERON:0003077!1.73e-10!83;UBERON:0003059!1.73e-10!83;UBERON:0007282!1.73e-10!83;UBERON:0009618!1.73e-10!83;UBERON:0007285!1.73e-10!83;UBERON:0004290!7.83e-10!70;UBERON:0005631!2.16e-09!14;UBERON:0000158!2.16e-09!14;UBERON:0000486!2.04e-08!82;UBERON:0002049!3.07e-08!79;UBERON:0007798!3.07e-08!79;UBERON:0004872!8.16e-08!84;UBERON:0004535!2.56e-07!110;UBERON:0001009!4.97e-07!113;UBERON:0001013!7.64e-07!14 | |ontology_enrichment_uberon=UBERON:0002385!1.41e-11!63;UBERON:0001015!1.41e-11!63;UBERON:0000383!1.41e-11!63;UBERON:0001134!2.33e-11!61;UBERON:0002036!2.33e-11!61;UBERON:0003082!2.33e-11!61;UBERON:0000478!2.61e-11!24;UBERON:0000914!1.73e-10!83;UBERON:0002329!1.73e-10!83;UBERON:0003077!1.73e-10!83;UBERON:0003059!1.73e-10!83;UBERON:0007282!1.73e-10!83;UBERON:0009618!1.73e-10!83;UBERON:0007285!1.73e-10!83;UBERON:0004290!7.83e-10!70;UBERON:0005631!2.16e-09!14;UBERON:0000158!2.16e-09!14;UBERON:0000486!2.04e-08!82;UBERON:0002049!3.07e-08!79;UBERON:0007798!3.07e-08!79;UBERON:0004872!8.16e-08!84;UBERON:0004535!2.56e-07!110;UBERON:0001009!4.97e-07!113;UBERON:0001013!7.64e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.34e-16;24!UBERON:0003104;2.44e-09;7!UBERON:0009142;2.44e-09;7!UBERON:0005631;4.43e-09;10!UBERON:0000158;4.43e-09;10!UBERON:0000305;1.32e-08;7!UBERON:0001013;4.90e-08;14!UBERON:0003422;5.43e-08;6!UBERON:0002384;1.19e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,1.15e-15,24;UBERON:0005631,3.24e-11,14;UBERON:0000158,3.24e-11,14;UBERON:0002384,1.10e-09,371;UBERON:0000305,2.74e-08,7;UBERON:0001013,3.67e-08,14;UBERON:0003422,4.89e-08,6;UBERON:0004871,4.48e-07,8 | |||
|phase1_expression=1.99846217197612,1.71280419112787,1.12763523276777,0,4.91657203870017,7.85104671690332,7.59899634504932,0.631719873426831,0,0,0.697801167972428,3.05817920982241,6.33040747748289,0.37129905888014,0.994192127183747,0.672325146451775,1.20538905604795,1.46062018077475,0.975865597581014,0.492484232307152,2.44800829493104,2.82109249330279,0,0.410623275218653,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,2.42938867502708,2.53007406669196,0,4.63508860674636,0,10.2193322763554,0.283604451492204,2.4390233720882,1.58102614247627,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0,0,0.258416759169329,0,0.33472061276467,0,0,0,1.10298924103761,4.0507097394088,0,0.22452937262617,0,0,0,0.916008719652036,0,0,0,13.9152146474689,1.51956613997496,0.529636723252875,16.3496873826824,2.12801029319014,5.60677600142307,1.06748995729705,9.8667019366864,0,2.42479209725439,0.980771418680752,1.05950199351452,6.33793516927999,0,0,0,0,0,0.323745888736263,0,0,0.245668634623536,0.103325781175765,1.18800285728205,1.7308685049499,0,2.15585442544872,0,0.250237039743928,0,0.877955241761676,3.37136575378922,1.95309476578576,1.58805056424029,4.12596162084383,1.49490172172997,1.48352330811693,11.4034616512073,0.515262646192195,8.50213782150576,0.558350568994769,1.18143432568886,0.876933046450788,7.32057945307932,0.920498986422993,0,7.81021103536552,0.604512589365842,0.508681776931463,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,1.56449532329816,1.28648187638577,0,0,2.16563844500876,0.709840800239063,0.337169380156203,1.20505514941741,0.330881918197182,1.30727666455444,1.18635309555548,0.269662616320329,0,0.769494313892781,0.738155454624648,0,0.8231480226628,14.7008711385542,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0,3.05262605013136,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.2933531432838,1.29271715757778,3.57656445851882,0.845302752556,1.06375246633948,2.08014873822732,0.771622122786426,0,0.266422179016099,4.00338382242813,11.9376753186117,4.93944202068461,1.95441710576241,4.26470338491055,8.71147060226772,0,0,0.699810938274399,0,0,0,2.63587341040741,2.29723871668228,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,1.62759014219841,10.1905722150095,9.09987842865525,7.7274183366628,2.34282829985426,0.300946099727719,0,3.10419213877515,2.65690239414175,2.58116835958384,0.347534457872331,0.979005787313703,3.43143423810856,0,0,0,3.03127571446259,3.32870879020994,13.9099534931653,1.24053903909388,4.60385919864187,6.17452207752762,1.79394808957981,0.511707249066704,5.30817939773905,4.45254199334973,1.23367755042124,6.03709866064632,0.492762936082855,1.03850885836724,2.44041794765914,0,0.200506470303285,0,2.06666006696292,1.45672934405374,1.31124414959424,0,0,0,0,0,0,0.340187410553031,0,4.62681758070868,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,1.00726411300178,1.56768049849117,0,0,0,0.290012154876366,0.770243085573222,1.68854042198743,0,0.429680979473094,2.0302337147992,0.426133137080504,2.58192903375538,0,0.192190067365106,0.255225424989168,0.50578890427775,0.929691098594572,9.75918275174984,0,1.54016790088044,0.532306030317022,0.869932992075073,1.11194531462352,0,1.48863347743867,1.58189712359363,3.43134349062885,0.255897791311334,1.71175595213568,0.318203247925937,0.78494864019923,1.61885211824983,3.0199073270966,1.7671860351853,0,0,0.842516912477962,0.975267478179181,1.70599442741899,0,0.409499734223957,2.2624869112594,0,1.65409603063837,1.99031692572366,0.438450885253763,1.15755106853338,1.31178950409327,0.202910376962704,0.30982349809975,1.69017361519345,0.717056761020258,4.51945588660357,0.7133421029625,0,2.53329162357197,2.63435914367922,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,2.14870036263921,2.37571744666111,4.30024982938925,0,0,0.111308705022906,0,0.211125408127993,0.796991953004279,0,0,1.02268682502155,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.615602068030377,1.25336261431701,0.23056390438806,0,0.108647371922008,1.91400695839152,0.915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,1.83309043480088,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0,0.246346371159628,0.0969890164884194,0,1.35588444468319,0.137041924646751,0,0,0,0,0.213452994739353,1.39866726707491,0,0,0,0,0,0,0.67952103036807,0.627617077873999,0.407992870545287,0,0,0,0,0.4297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| ||
|short_description=p@chr9:137620548..137620598,- | |short_description=p@chr9:137620548..137620598,- | ||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137620548..137620598, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137620548..137620598, - |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.02e-18 | 19 |
fibroblast | 2.19e-14 | 76 |
multi fate stem cell | 5.82e-13 | 427 |
somatic stem cell | 2.43e-12 | 433 |
stem cell | 1.51e-11 | 441 |
preadipocyte | 7.79e-09 | 12 |
connective tissue cell | 8.09e-09 | 361 |
mesenchymal cell | 2.98e-08 | 354 |
mesenchymal stem cell of umbilical cord | 4.89e-08 | 6 |
mesenchymal stem cell of adipose | 1.55e-07 | 8 |
motile cell | 2.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 1.15e-15 | 24 |
extraembryonic membrane | 3.24e-11 | 14 |
membranous layer | 3.24e-11 | 14 |
connective tissue | 1.10e-09 | 371 |
amnion | 2.74e-08 | 7 |
adipose tissue | 3.67e-08 | 14 |
mesenchyme of umbilical cord | 4.89e-08 | 6 |
somatic layer of lateral plate mesoderm | 4.48e-07 | 8 |