FFCP PHASE1:Hg19::chr19:48613987..48613999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48613987..48613999,-
|short_description=p5@PLA2G4C
|description=CAGE_peak_5_at_PLA2G4C_5end
|association_with_transcript=109bp_to_ENST00000354276,NM_00115...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8605 | |EntrezGene=8605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9037 | |HGNC=9037 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UP65,B4DI40 | |UniProt=Q9UP65,B4DI40 | ||
|association_with_transcript=109bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end | |||
|cluster_id=chr19:48613987..48613999,- | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_5_at_PLA2G4C_5end | |||
|id=chr19:48613987..48613999,- | |||
|ontology_enrichment_celltype=CL:0002139!2.11e-12!24;CL:0000115!4.66e-10!35;CL:0002078!1.22e-08!44;CL:0000213!1.24e-08!57;CL:0000215!1.24e-08!57;CL:0000071!8.76e-08!18;CL:0002546!8.76e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.37e-28;24!CL:0000115;3.93e-19;36!CL:0002138;9.50e-17;6!CL:0000071;1.31e-15;18!CL:1000413;1.83e-14;9!CL:0002078;4.26e-13;45!CL:0002144;1.04e-12;3!CL:0000213;1.15e-12;58!CL:0000215;1.15e-12;58!CL:0002544;2.84e-10;6!CL:0002545;1.02e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.58e-28,24;CL:0000115,2.21e-23,36;CL:0000213,9.22e-19,58;CL:0000215,9.22e-19,58;CL:0002078,6.72e-18,45;CL:0005020,1.03e-16,6;CL:0002138,1.03e-16,6;CL:0005022,1.03e-16,6;CL:0000071,1.41e-15,18;CL:0002546,1.41e-15,18;CL:1000413,2.13e-14,9;CL:0002144,9.52e-13,3;CL:0002544,4.05e-10,6;CL:0002545,9.52e-09,2;CL:0000076,4.82e-07,63 | |||
|ontology_enrichment_development_v019=CL:0005022;9.50e-17;6!CL:0002546;1.31e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-25!115;UBERON:0001049!1.20e-19!57;UBERON:0005068!1.20e-19!57;UBERON:0006241!1.20e-19!57;UBERON:0007135!1.20e-19!57;UBERON:0004111!1.85e-17!241;UBERON:0000025!8.63e-17!194;UBERON:0002780!1.67e-15!41;UBERON:0001890!1.67e-15!41;UBERON:0006240!1.67e-15!41;UBERON:0003075!4.05e-15!86;UBERON:0007284!4.05e-15!86;UBERON:0000955!4.93e-15!69;UBERON:0006238!4.93e-15!69;UBERON:0002346!5.96e-15!90;UBERON:0002616!6.64e-15!59;UBERON:0003080!7.63e-15!42;UBERON:0000477!9.92e-15!286;UBERON:0001017!1.05e-14!82;UBERON:0005743!1.22e-14!86;UBERON:0000073!7.89e-13!94;UBERON:0001016!7.89e-13!94;UBERON:0002020!2.52e-11!34;UBERON:0003528!2.52e-11!34;UBERON:0001893!2.94e-11!34;UBERON:0002791!1.12e-10!33;UBERON:0000468!2.18e-10!659;UBERON:0000467!6.15e-10!625;UBERON:0001869!6.30e-10!32;UBERON:0000480!8.00e-10!626;UBERON:0000483!1.10e-09!309;UBERON:0000119!2.81e-09!312;UBERON:0003056!3.89e-09!61;UBERON:0001950!4.75e-09!20;UBERON:0000153!6.11e-09!129;UBERON:0007811!6.11e-09!129;UBERON:0002619!7.85e-09!22;UBERON:0000033!2.55e-08!123;UBERON:0001986!8.76e-08!18;UBERON:0004638!8.76e-08!18;UBERON:0004852!8.76e-08!18;UBERON:0000055!1.89e-07!69;UBERON:0000956!4.16e-07!25;UBERON:0000203!4.16e-07!25;UBERON:0000924!7.86e-07!173;UBERON:0006601!7.86e-07!173;UBERON:0004121!9.52e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.67e-17;8!UBERON:0004536;2.67e-17;8!UBERON:0006558;2.67e-17;8!UBERON:0004638;1.31e-15;18!UBERON:0001986;1.31e-15;18!UBERON:0004852;1.31e-15;18!UBERON:0003915;1.83e-14;9!UBERON:0004700;1.83e-14;9!UBERON:0001917;1.83e-14;9!UBERON:0002465;1.08e-13;10!UBERON:0010523;1.04e-12;3!UBERON:0001915;1.04e-12;3!UBERON:0001982;1.04e-12;3!UBERON:0000487;1.88e-12;22!UBERON:0006914;9.50e-11;25!UBERON:0005090;4.66e-09;2!UBERON:0001630;4.66e-09;2!UBERON:0005800;1.02e-08;2!UBERON:0001515;1.02e-08;2!UBERON:0000490;1.43e-07;33!UBERON:0004733;3.85e-07;12!UBERON:0002028;3.85e-07;12!UBERON:0000055;5.86e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.42e-17,8;UBERON:0004536,2.42e-17,8;UBERON:0006558,2.42e-17,8;UBERON:0004638,1.41e-15,18;UBERON:0001986,1.41e-15,18;UBERON:0004852,1.41e-15,18;UBERON:0003915,2.13e-14,9;UBERON:0004700,2.13e-14,9;UBERON:0001917,2.13e-14,9;UBERON:0004111,4.82e-14,240;UBERON:0001049,5.66e-14,56;UBERON:0005068,5.66e-14,56;UBERON:0006241,5.66e-14,56;UBERON:0007135,5.66e-14,56;UBERON:0002465,1.00e-13,10;UBERON:0010523,9.52e-13,3;UBERON:0001915,9.52e-13,3;UBERON:0001982,9.52e-13,3;UBERON:0000487,2.00e-12,22;UBERON:0000073,2.04e-11,53;UBERON:0002616,2.04e-11,53;UBERON:0006914,1.00e-10,25;UBERON:0003076,1.32e-10,15;UBERON:0003057,1.32e-10,15;UBERON:0000025,2.02e-10,192;UBERON:0007023,7.50e-10,114;UBERON:0000055,3.42e-09,68;UBERON:0005090,4.78e-09,2;UBERON:0001630,4.78e-09,2;UBERON:0005800,9.52e-09,2;UBERON:0001515,9.52e-09,2;UBERON:0001017,2.19e-08,81;UBERON:0003075,2.19e-08,82;UBERON:0007284,2.19e-08,82;UBERON:0000955,4.69e-08,68;UBERON:0006238,4.69e-08,68;UBERON:0002346,7.85e-08,86;UBERON:0002049,1.40e-07,78;UBERON:0007798,1.40e-07,78;UBERON:0001016,3.30e-07,89;UBERON:0004733,3.61e-07,12;UBERON:0002028,3.61e-07,12;UBERON:0007277,3.61e-07,12;UBERON:0003528,8.39e-07,34;UBERON:0002020,8.39e-07,34 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0.142169232487422,0,0,0.401088894940283,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0.324547393654683,0,0,0.238490624305342,0,0,2.18638648103376,0,0.347140501607594,1.13061588384802,2.93649605346934,0,1.46296476575767,0.258416759169329,4.26919515224052,3.3472061276467,10.4735622448378,7.60272105718513,3.90499292077071,2.94130464276695,2.43042584364528,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.549605231791222,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,1.43723628363248,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,23.531730985055,13.4265798647217,10.0834700684337,0,0,0.738651018262192,0.234004265139238,0.891786973732369,0,0,0,0,0,0.383382679165211,0,0,0,0,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,1.20575750823834,0,0.299918973546171,1.2162378064119,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0,1.13733384070897,0.510281115829547,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0.23874448473769,0,0,0,0.562677665642051,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,1.54810963903714,1.77328571372128,0.87754158861589,0.10893846351899,0,0.461701551022782,0.683652335082007,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.943615861729479,4.01288823649394,1.63985112007737,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,1.80388103297391,0,0,1.65495977937749,0,1.19472429772959,0.284609546029793,0.416024019039416,0,0,0.0870592065804026,1.04836000945218,1.20390222730132,0,0,0,0.290967049465258,0.441280633457501,0.451961481561065,0,0,0.823040347426423,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0.745515213392595,0,0.407712618220842,0,0,0,2.40168115483916,0.958337652243951,0,0,0,0.837847203816763,0.916641696046735,0,0.599037001496973,1.28767814440971,0.89268582976749,0.739018197353989,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0.408610218334727,0.160753148465019,0,0,0.449947783103001,0,0.425246896606173,0,0.394028536495991,0.157363764404994,0.950403028674658,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0,0,1.29282956361551,0.79339561045614,0.171086837884329,0,0.213574825135389,0.471612915298998,0.828478110694391,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,1.22026264901963,1.6274820991845,0.573409195690071,0.554645257684261,1.17983165588629,0.553394539744923,0,0.151649117541648,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.310525913752519,0,0,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.214821114084977,0.928067519756987,0,0.400027764663154,0,0.336749488765919,0,0.963099152036517,0,1.30497145982606,0,0,1.46842022703881,0.179088841081487,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0.553033744606923,0.194860308839388,0,0,0.327609848846413,0.737318726261158,0,0.39997479170986,0,0,1.13503190713367,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0.247871528518004,0,0.636008701306837,0,1.60114149657094,0,0,0.449604575675217,2.8339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| ||
|short_description=p5@PLA2G4C | |||
}} | }} |
Latest revision as of 01:25, 19 September 2015
Short description: | p5@PLA2G4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLA2G4C_5end |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | 109bp_to_ENST00000354276, NM_001159322, NM_001159323, NM_003706, uc002phx.2, uc002phy.3, uc010elr.2, uc010xzd.1_5end |
EntrezGene: | PLA2G4C |
HGNC: | 9037 |
UniProt: | Q9UP65B4DI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.58e-28 | 24 |
endothelial cell | 2.21e-23 | 36 |
lining cell | 9.22e-19 | 58 |
barrier cell | 9.22e-19 | 58 |
meso-epithelial cell | 6.72e-18 | 45 |
lymphangioblast | 1.03e-16 | 6 |
endothelial cell of lymphatic vessel | 1.03e-16 | 6 |
vascular lymphangioblast | 1.03e-16 | 6 |
blood vessel endothelial cell | 1.41e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.41e-15 | 18 |
endothelial cell of artery | 2.13e-14 | 9 |
capillary endothelial cell | 9.52e-13 | 3 |
aortic endothelial cell | 4.05e-10 | 6 |
thoracic aorta endothelial cell | 9.52e-09 | 2 |
squamous epithelial cell | 4.82e-07 | 63 |