FFCP PHASE1:Hg19::chr19:48245317..48245328,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48245317..48245328,+
|short_description=p6@AK301380
|description=CAGE_peak_6_at_AK301380_5end
|association_with_transcript=169bp_to_AK301380_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z732 | |UniProt=B7Z732 | ||
|association_with_transcript=169bp_to_AK301380_5end | |||
|cluster_id=chr19:48245317..48245328,+ | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_6_at_AK301380_5end | |||
|id=chr19:48245317..48245328,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.50e-26!180;CL:0000057!1.33e-17!75;CL:0000222!3.51e-16!119;CL:0000183!3.82e-15!59;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000187!4.21e-13!54;CL:0000192!1.40e-11!42;CL:0000514!1.40e-11!42;CL:0000220!1.05e-10!246;CL:0002321!1.34e-10!248;CL:0000393!5.08e-10!60;CL:0000211!5.08e-10!60;CL:0000359!1.71e-08!32;CL:0002620!2.55e-08!23;CL:0002334!2.45e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.60e-11;12!CL:0000192;3.73e-08;43!CL:0002620;5.85e-08;23!CL:0000359;4.20e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.88e-18,76;CL:0002334,6.02e-11,12;CL:0000192,6.22e-11,43;CL:0000514,6.22e-11,43;CL:0000187,9.98e-11,55;CL:0000680,2.47e-10,58;CL:0000056,2.47e-10,58;CL:0000355,2.47e-10,58;CL:0000393,9.54e-09,61;CL:0000211,9.54e-09,61;CL:0000222,1.12e-08,121;CL:0000723,3.81e-08,433;CL:0000048,1.22e-07,427;CL:0002620,1.88e-07,23;CL:0000034,1.92e-07,441;CL:0000359,4.74e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.73e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.49e-15!84;UBERON:0000914!2.26e-15!83;UBERON:0002329!2.26e-15!83;UBERON:0003077!2.26e-15!83;UBERON:0003059!2.26e-15!83;UBERON:0007282!2.26e-15!83;UBERON:0009618!2.26e-15!83;UBERON:0007285!2.26e-15!83;UBERON:0000486!2.22e-14!82;UBERON:0005256!2.88e-14!143;UBERON:0002049!3.43e-14!79;UBERON:0007798!3.43e-14!79;UBERON:0004290!1.51e-13!70;UBERON:0002385!2.19e-13!63;UBERON:0001015!2.19e-13!63;UBERON:0000383!2.19e-13!63;UBERON:0001134!2.60e-13!61;UBERON:0002036!2.60e-13!61;UBERON:0003082!2.60e-13!61;UBERON:0000055!6.76e-13!69;UBERON:0002100!5.10e-12!216;UBERON:0000475!7.28e-12!365;UBERON:0001981!9.47e-12!60;UBERON:0007500!9.47e-12!60;UBERON:0004537!9.47e-12!60;UBERON:0006965!9.47e-12!60;UBERON:0003102!1.33e-11!95;UBERON:0001009!5.91e-11!113;UBERON:0003914!7.38e-11!118;UBERON:0004535!8.35e-11!110;UBERON:0001637!3.98e-10!42;UBERON:0003509!3.98e-10!42;UBERON:0004572!3.98e-10!42;UBERON:0000477!2.06e-09!286;UBERON:0000490!5.55e-09!138;UBERON:0000119!9.36e-09!312;UBERON:0002199!1.21e-08!45;UBERON:0002416!1.21e-08!45;UBERON:0000483!1.31e-08!309;UBERON:0003104!5.96e-08!238;UBERON:0009142!5.96e-08!238;UBERON:0002097!1.06e-07!40;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0000481!1.60e-07!347;UBERON:0000468!5.37e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.53e-07;46!UBERON:0002416;1.53e-07;46!UBERON:0004457;4.68e-07;9!UBERON:0000042;4.68e-07;9!UBERON:0002097;6.21e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.45e-12,78;UBERON:0002385,8.13e-11,64;UBERON:0001015,8.13e-11,64;UBERON:0000383,8.13e-11,64;UBERON:0001134,8.96e-11,62;UBERON:0002036,8.96e-11,62;UBERON:0003082,8.96e-11,62;UBERON:0002329,2.74e-10,71;UBERON:0003059,2.74e-10,71;UBERON:0007282,2.74e-10,71;UBERON:0004290,2.74e-10,71;UBERON:0009618,2.74e-10,71;UBERON:0000486,3.55e-10,83;UBERON:0003077,5.40e-10,72;UBERON:0007285,5.40e-10,72;UBERON:0007524,1.04e-09,73;UBERON:0005256,2.37e-09,122;UBERON:0002199,2.62e-09,46;UBERON:0002416,2.62e-09,46;UBERON:0000055,3.56e-09,68;UBERON:0004872,4.47e-09,83;UBERON:0001637,7.69e-09,42;UBERON:0003509,7.69e-09,42;UBERON:0004572,7.69e-09,42;UBERON:0007500,1.05e-08,59;UBERON:0001981,1.05e-08,59;UBERON:0004537,1.05e-08,59;UBERON:0006965,1.05e-08,59;UBERON:0002049,1.10e-08,78;UBERON:0007798,1.10e-08,78;UBERON:0003102,1.28e-08,99;UBERON:0003104,1.87e-08,160;UBERON:0009142,1.87e-08,160;UBERON:0002097,1.33e-07,41;UBERON:0002100,4.45e-07,199;UBERON:0003914,5.63e-07,117;UBERON:0004573,7.14e-07,33;UBERON:0004571,7.14e-07,33;UBERON:0000490,7.28e-07,148 | |||
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| ||
|short_description=p6@AK301380 | |||
}} | }} |
Latest revision as of 00:38, 19 September 2015
Short description: | p6@AK301380 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AK301380_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | 169bp_to_AK301380_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.88e-18 | 76 |
preadipocyte | 6.02e-11 | 12 |
smooth muscle cell | 6.22e-11 | 43 |
smooth muscle myoblast | 6.22e-11 | 43 |
muscle cell | 9.98e-11 | 55 |
muscle precursor cell | 2.47e-10 | 58 |
myoblast | 2.47e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.47e-10 | 58 |
electrically responsive cell | 9.54e-09 | 61 |
electrically active cell | 9.54e-09 | 61 |
mesodermal cell | 1.12e-08 | 121 |
somatic stem cell | 3.81e-08 | 433 |
multi fate stem cell | 1.22e-07 | 427 |
skin fibroblast | 1.88e-07 | 23 |
stem cell | 1.92e-07 | 441 |
vascular associated smooth muscle cell | 4.74e-07 | 32 |