FFCP PHASE1:Hg19::chr19:48245099..48245147,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48245099..48245147,-
|short_description=p1@CU677000
|description=CAGE_peak_1_at_CU677000_5end
|association_with_transcript=-411bp_to_CU677000_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-411bp_to_CU677000_5end | |||
|cluster_id=chr19:48245099..48245147,- | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_1_at_CU677000_5end | |||
|id=chr19:48245099..48245147,- | |||
|ontology_enrichment_celltype=CL:0000055!7.31e-24!180;CL:0000057!5.54e-15!75;CL:0000222!1.56e-14!119;CL:0000183!4.32e-13!59;CL:0000220!5.25e-12!246;CL:0002321!8.79e-12!248;CL:0000680!3.47e-11!57;CL:0000056!3.47e-11!57;CL:0000355!3.47e-11!57;CL:0000187!9.60e-11!54;CL:0000393!1.79e-09!60;CL:0000211!1.79e-09!60;CL:0000192!3.25e-09!42;CL:0000514!3.25e-09!42;CL:0002371!3.78e-08!591;CL:0000144!2.00e-07!625;CL:0000630!7.72e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.88e-08;43!CL:0000057;1.56e-07;73!CL:0000187;2.46e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.07e-18,76;CL:0000222,1.27e-16,121;CL:0000680,7.92e-13,58;CL:0000056,7.92e-13,58;CL:0000355,7.92e-13,58;CL:0000187,8.97e-13,55;CL:0002321,5.52e-11,250;CL:0000393,1.67e-10,61;CL:0000211,1.67e-10,61;CL:0000192,1.71e-10,43;CL:0000514,1.71e-10,43 | |||
|ontology_enrichment_development_v019=CL:0000514;5.88e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.22e-15!143;UBERON:0000475!9.24e-15!365;UBERON:0000486!4.24e-14!82;UBERON:0000914!5.94e-14!83;UBERON:0002329!5.94e-14!83;UBERON:0003077!5.94e-14!83;UBERON:0003059!5.94e-14!83;UBERON:0007282!5.94e-14!83;UBERON:0009618!5.94e-14!83;UBERON:0007285!5.94e-14!83;UBERON:0000481!4.10e-13!347;UBERON:0003102!1.02e-12!95;UBERON:0004290!1.18e-12!70;UBERON:0002100!6.98e-12!216;UBERON:0000119!9.17e-12!312;UBERON:0002385!1.62e-11!63;UBERON:0001015!1.62e-11!63;UBERON:0000383!1.62e-11!63;UBERON:0000483!1.91e-11!309;UBERON:0001134!2.83e-11!61;UBERON:0002036!2.83e-11!61;UBERON:0003082!2.83e-11!61;UBERON:0002049!5.19e-11!79;UBERON:0007798!5.19e-11!79;UBERON:0004872!2.31e-10!84;UBERON:0003104!3.45e-10!238;UBERON:0009142!3.45e-10!238;UBERON:0000468!6.83e-10!659;UBERON:0000477!9.16e-10!286;UBERON:0003914!3.79e-09!118;UBERON:0000490!4.53e-09!138;UBERON:0001013!2.02e-08!14;UBERON:0000055!3.37e-08!69;UBERON:0002199!1.01e-07!45;UBERON:0002416!1.01e-07!45;UBERON:0001981!1.51e-07!60;UBERON:0007500!1.51e-07!60;UBERON:0004537!1.51e-07!60;UBERON:0006965!1.51e-07!60;UBERON:0000467!2.38e-07!625;UBERON:0004535!3.52e-07!110;UBERON:0000480!3.55e-07!626;UBERON:0000064!4.10e-07!219;UBERON:0001637!5.32e-07!42;UBERON:0003509!5.32e-07!42;UBERON:0004572!5.32e-07!42;UBERON:0001009!5.63e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.30e-09;14!UBERON:0002384;5.12e-07;198!UBERON:0002199;9.35e-07;46!UBERON:0002416;9.35e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.23e-17,78;UBERON:0003104,3.45e-14,160;UBERON:0009142,3.45e-14,160;UBERON:0005256,7.65e-14,122;UBERON:0000486,7.82e-14,83;UBERON:0007524,1.65e-13,73;UBERON:0002329,1.66e-13,71;UBERON:0003059,1.66e-13,71;UBERON:0007282,1.66e-13,71;UBERON:0004290,1.66e-13,71;UBERON:0009618,1.66e-13,71;UBERON:0003077,4.68e-13,72;UBERON:0007285,4.68e-13,72;UBERON:0003102,2.72e-12,99;UBERON:0001134,5.26e-12,62;UBERON:0002036,5.26e-12,62;UBERON:0003082,5.26e-12,62;UBERON:0002385,5.42e-12,64;UBERON:0001015,5.42e-12,64;UBERON:0000383,5.42e-12,64;UBERON:0001013,6.54e-10,14;UBERON:0000490,1.00e-09,148;UBERON:0002049,1.06e-09,78;UBERON:0007798,1.06e-09,78;UBERON:0002199,1.93e-09,46;UBERON:0002416,1.93e-09,46;UBERON:0002100,4.43e-09,199;UBERON:0004872,1.38e-08,83;UBERON:0003914,3.43e-08,117;UBERON:0004535,1.00e-07,109;UBERON:0001637,2.34e-07,42;UBERON:0003509,2.34e-07,42;UBERON:0004572,2.34e-07,42;UBERON:0001009,2.39e-07,112;UBERON:0000055,4.35e-07,68;UBERON:0002097,6.02e-07,41 | |||
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| ||
|short_description=p1@CU677000 | |||
}} | }} |
Latest revision as of 15:34, 27 July 2015
Short description: | p1@CU677000 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU677000_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | -411bp_to_CU677000_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.07e-18 | 76 |
mesodermal cell | 1.27e-16 | 121 |
muscle precursor cell | 7.92e-13 | 58 |
myoblast | 7.92e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.92e-13 | 58 |
muscle cell | 8.97e-13 | 55 |
embryonic cell | 5.52e-11 | 250 |
electrically responsive cell | 1.67e-10 | 61 |
electrically active cell | 1.67e-10 | 61 |
smooth muscle cell | 1.71e-10 | 43 |
smooth muscle myoblast | 1.71e-10 | 43 |