FFCP PHASE1:Hg19::chr19:48233021..48233040,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:48233021..48233040,+
|short_description=p@chr19:48233021..48233040,+
|description=CAGE_peak_at_chr19:48233021..48233040,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:48233021..48233040,+ | |||
|description=CAGE_peak_at_chr19:48233021..48233040,+ | |||
|id=chr19:48233021..48233040,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.52e-15!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.02e-27!106;DOID:0050687!3.98e-19!143;DOID:162!5.84e-15!235;DOID:14566!3.66e-14!239;DOID:299!1.58e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:178;1.46e-08;1!DOID:326;1.46e-08;1!DOID:3978;1.46e-08;1!DOID:3394;1.46e-08;1!DOID:5844;1.46e-08;1!DOID:3111;4.25e-08;1!DOID:6193;4.25e-08;1!DOID:3603;4.25e-08;1!DOID:1749;5.33e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-15,106;DOID:0050687,3.89e-12,143;DOID:178,1.41e-08,1;DOID:326,1.41e-08,1;DOID:3978,1.41e-08,1;DOID:3394,1.41e-08,1;DOID:5844,1.41e-08,1;DOID:3111,3.10e-08,1;DOID:3603,3.10e-08,1;DOID:1749,6.03e-08,14;DOID:162,6.84e-08,235;DOID:6193,7.16e-08,1;DOID:14566,1.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.90e-09!38;UBERON:0003258!1.90e-09!38;UBERON:0001737!1.99e-08!9;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0001007!2.02e-08!155;UBERON:0001555!2.02e-08!155;UBERON:0007026!2.02e-08!155;UBERON:0000077!1.93e-07!130;UBERON:0000065!4.46e-07!53;UBERON:0004921!6.66e-07!129;UBERON:0004185!6.66e-07!129;UBERON:0005911!7.81e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.25e-08;1!UBERON:0002171;4.25e-08;1!UBERON:0005056;4.25e-08;1!UBERON:0006518;4.25e-08;1!UBERON:0008949;4.25e-08;1!UBERON:0004176;4.25e-08;1!UBERON:0000101;4.25e-08;1!UBERON:0002167;4.25e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.11e-08,1;UBERON:0006518,4.11e-08,1;UBERON:0008949,4.11e-08,1;UBERON:0000101,4.11e-08,1;UBERON:0002167,4.11e-08,1;UBERON:0000997,5.07e-08,1;UBERON:0005056,5.07e-08,1 | |||
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| ||
|short_description=p@chr19:48233021..48233040,+ | |||
}} | }} |
Latest revision as of 15:34, 27 July 2015
Short description: | p@chr19:48233021..48233040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48233021..48233040, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.11e-08 | 1 |
right lung lobe | 4.11e-08 | 1 |
lower lobe of lung | 4.11e-08 | 1 |
lobe of lung | 4.11e-08 | 1 |
right lung | 4.11e-08 | 1 |
mammalian vulva | 5.07e-08 | 1 |
external female genitalia | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-15 | 106 |
cell type cancer | 3.89e-12 | 143 |
vascular disease | 1.41e-08 | 1 |
ischemia | 1.41e-08 | 1 |
extrinsic cardiomyopathy | 1.41e-08 | 1 |
myocardial ischemia | 1.41e-08 | 1 |
myocardial infarction | 1.41e-08 | 1 |
cystadenocarcinoma | 3.10e-08 | 1 |
mucinous cystadenocarcinoma | 3.10e-08 | 1 |
squamous cell carcinoma | 6.03e-08 | 14 |
cancer | 6.84e-08 | 235 |
epithelioid sarcoma | 7.16e-08 | 1 |
disease of cellular proliferation | 1.20e-07 | 239 |