FFCP PHASE1:Hg19::chr8:73449535..73449575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9312 | |EntrezGene=9312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6232 | |HGNC=6232 | ||
|TSSclassifier=strong | |||
|UniProt=Q92953 | |UniProt=Q92953 | ||
|association_with_transcript=-50bp_to_ENST00000523207,NM_004770,uc003xzb.2_5end | |association_with_transcript=-50bp_to_ENST00000523207,NM_004770,uc003xzb.2_5end | ||
|cluster_id=chr8:73449535..73449575,+ | |||
|coexpression_cluster_id=C4771 | |coexpression_cluster_id=C4771 | ||
|description=CAGE_peak_3_at_KCNB2_5end | |description=CAGE_peak_3_at_KCNB2_5end | ||
|id=chr8:73449535..73449575,+ | |id=chr8:73449535..73449575,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.03e-07;1!CL:0000167;1.61e-07;1!CL:0000164;1.61e-07;1!CL:0000502;1.61e-07;1!CL:0000172;1.61e-07;1!CL:0000173;1.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.03e-07,1;CL:0000167,1.33e-07,1;CL:0000164,1.33e-07,1;CL:0000502,1.33e-07,1;CL:0000172,1.33e-07,1;CL:0000173,1.33e-07,1;CL:0002351,1.33e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.61e-07;1!UBERON:0006601;6.41e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.18e-14;4!DOID:1325;1.97e-08;7!DOID:3904;1.97e-08;7!DOID:4430;1.61e-07;1!DOID:1324;9.43e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.82e-14,4;DOID:1325,1.78e-08,7;DOID:3904,1.78e-08,7;DOID:4430,1.33e-07,1;DOID:1324,8.87e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-39!57;UBERON:0005068!3.28e-39!57;UBERON:0006241!3.28e-39!57;UBERON:0007135!3.28e-39!57;UBERON:0001017!1.16e-38!82;UBERON:0005743!2.67e-38!86;UBERON:0003075!5.93e-38!86;UBERON:0007284!5.93e-38!86;UBERON:0000073!3.72e-37!94;UBERON:0001016!3.72e-37!94;UBERON:0002780!1.54e-36!41;UBERON:0001890!1.54e-36!41;UBERON:0006240!1.54e-36!41;UBERON:0002346!1.08e-35!90;UBERON:0003080!1.78e-35!42;UBERON:0003056!2.18e-33!61;UBERON:0000955!1.13e-32!69;UBERON:0006238!1.13e-32!69;UBERON:0002619!1.16e-31!22;UBERON:0001950!1.84e-31!20;UBERON:0002020!4.97e-31!34;UBERON:0003528!4.97e-31!34;UBERON:0002616!7.61e-31!59;UBERON:0001893!1.01e-30!34;UBERON:0001869!1.81e-30!32;UBERON:0002791!5.70e-29!33;UBERON:0000956!2.52e-27!25;UBERON:0000203!2.52e-27!25;UBERON:0007023!7.97e-25!115;UBERON:0004121!3.37e-23!169;UBERON:0000153!2.21e-22!129;UBERON:0007811!2.21e-22!129;UBERON:0000924!2.52e-22!173;UBERON:0006601!2.52e-22!173;UBERON:0000033!2.16e-20!123;UBERON:0000200!1.10e-13!6;UBERON:0001871!1.30e-13!7;UBERON:0000064!2.30e-10!219;UBERON:0000025!2.29e-08!194;UBERON:0000483!4.05e-08!309;UBERON:0000119!6.50e-08!312;UBERON:0002771!8.42e-08!3;UBERON:0002021!1.27e-07!5;UBERON:0001872!1.90e-07!5;UBERON:0000349!2.99e-07!5;UBERON:0000062!3.28e-07!511;UBERON:0001894!3.70e-07!7;UBERON:0006222!3.70e-07!7;UBERON:0000922!4.51e-07!612;UBERON:0000988!4.66e-07!3;UBERON:0002240!6.37e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.28e-39!57;UBERON:0005068!3.28e-39!57;UBERON:0006241!3.28e-39!57;UBERON:0007135!3.28e-39!57;UBERON:0001017!1.16e-38!82;UBERON:0005743!2.67e-38!86;UBERON:0003075!5.93e-38!86;UBERON:0007284!5.93e-38!86;UBERON:0000073!3.72e-37!94;UBERON:0001016!3.72e-37!94;UBERON:0002780!1.54e-36!41;UBERON:0001890!1.54e-36!41;UBERON:0006240!1.54e-36!41;UBERON:0002346!1.08e-35!90;UBERON:0003080!1.78e-35!42;UBERON:0003056!2.18e-33!61;UBERON:0000955!1.13e-32!69;UBERON:0006238!1.13e-32!69;UBERON:0002619!1.16e-31!22;UBERON:0001950!1.84e-31!20;UBERON:0002020!4.97e-31!34;UBERON:0003528!4.97e-31!34;UBERON:0002616!7.61e-31!59;UBERON:0001893!1.01e-30!34;UBERON:0001869!1.81e-30!32;UBERON:0002791!5.70e-29!33;UBERON:0000956!2.52e-27!25;UBERON:0000203!2.52e-27!25;UBERON:0007023!7.97e-25!115;UBERON:0004121!3.37e-23!169;UBERON:0000153!2.21e-22!129;UBERON:0007811!2.21e-22!129;UBERON:0000924!2.52e-22!173;UBERON:0006601!2.52e-22!173;UBERON:0000033!2.16e-20!123;UBERON:0000200!1.10e-13!6;UBERON:0001871!1.30e-13!7;UBERON:0000064!2.30e-10!219;UBERON:0000025!2.29e-08!194;UBERON:0000483!4.05e-08!309;UBERON:0000119!6.50e-08!312;UBERON:0002771!8.42e-08!3;UBERON:0002021!1.27e-07!5;UBERON:0001872!1.90e-07!5;UBERON:0000349!2.99e-07!5;UBERON:0000062!3.28e-07!511;UBERON:0001894!3.70e-07!7;UBERON:0006222!3.70e-07!7;UBERON:0000922!4.51e-07!612;UBERON:0000988!4.66e-07!3;UBERON:0002240!6.37e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.60e-33;20!UBERON:0002619;4.13e-30;22!UBERON:0000956;2.10e-26;25!UBERON:0000203;2.10e-26;25!UBERON:0000200;3.29e-25;6!UBERON:0001869;8.02e-24;32!UBERON:0003528;1.18e-22;34!UBERON:0002020;1.18e-22;34!UBERON:0001893;6.08e-22;34!UBERON:0002791;1.70e-21;32!UBERON:0001870;1.06e-18;3!UBERON:0002780;2.75e-15;41!UBERON:0001890;2.75e-15;41!UBERON:0000955;6.90e-15;68!UBERON:0001871;2.44e-14;6!UBERON:0000073;1.44e-13;53!UBERON:0002616;1.44e-13;53!UBERON:0002771;2.33e-13;2!UBERON:0002702;3.38e-13;2!UBERON:0001017;1.48e-12;75!UBERON:0001016;9.77e-11;83!UBERON:0002114;3.66e-09;2!UBERON:0002022;3.20e-07;1!UBERON:0001874;3.20e-07;1!UBERON:0003112;3.20e-07;1!UBERON:0011158;3.20e-07;1!UBERON:0007190;3.20e-07;1!UBERON:0003128;3.20e-07;1!UBERON:0001703;3.20e-07;1!UBERON:0002241;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.47e-33,20;UBERON:0002619,2.93e-30,22;UBERON:0001869,1.53e-28,32;UBERON:0003528,8.94e-27,34;UBERON:0002020,8.94e-27,34;UBERON:0001893,9.14e-27,34;UBERON:0000956,1.56e-26,25;UBERON:0000203,1.56e-26,25;UBERON:0002780,2.01e-25,41;UBERON:0001890,2.01e-25,41;UBERON:0003080,2.01e-25,41;UBERON:0006240,2.01e-25,41;UBERON:0000200,7.04e-25,6;UBERON:0000955,2.04e-24,68;UBERON:0006238,2.04e-24,68;UBERON:0002791,2.39e-24,32;UBERON:0001017,1.80e-22,81;UBERON:0001016,2.63e-22,89;UBERON:0000073,4.63e-22,53;UBERON:0002616,4.63e-22,53;UBERON:0001049,9.71e-21,56;UBERON:0005068,9.71e-21,56;UBERON:0006241,9.71e-21,56;UBERON:0007135,9.71e-21,56;UBERON:0003056,6.35e-19,61;UBERON:0001870,1.13e-18,3;UBERON:0003075,2.51e-15,82;UBERON:0007284,2.51e-15,82;UBERON:0002346,1.80e-14,86;UBERON:0001871,2.13e-14,6;UBERON:0011216,2.24e-14,223;UBERON:0002771,2.81e-13,2;UBERON:0010371,4.19e-13,104;UBERON:0002702,4.89e-13,2;UBERON:0004121,4.32e-11,171;UBERON:0000924,4.32e-11,171;UBERON:0006601,4.32e-11,171;UBERON:0010314,1.35e-09,132;UBERON:0002114,4.32e-09,2;UBERON:0000025,2.02e-07,192;UBERON:0002022,2.50e-07,1;UBERON:0003112,3.20e-07,1;UBERON:0011158,3.20e-07,1;UBERON:0003128,3.20e-07,1;UBERON:0001703,3.20e-07,1;UBERON:0002241,3.20e-07,1;UBERON:0004761,3.20e-07,1;UBERON:0009617,3.20e-07,1;UBERON:0001874,3.62e-07,1;UBERON:0007190,4.61e-07,1 | |||
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|short_description=p3@KCNB2 | |short_description=p3@KCNB2 | ||
}} | }} |
Latest revision as of 01:34, 19 September 2015
Short description: | p3@KCNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNB2_5end |
Coexpression cluster: | C4771_medulloblastoma_parietal_gastrointestinal_temporal_duodenum_occipital_neuroblastoma |
Association with transcript: | -50bp_to_ENST00000523207, NM_004770, uc003xzb.2_5end |
EntrezGene: | KCNB2 |
HGNC: | 6232 |
UniProt: | Q92953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.03e-07 | 1 |
peptide hormone secreting cell | 1.33e-07 | 1 |
enteroendocrine cell | 1.33e-07 | 1 |
type D enteroendocrine cell | 1.33e-07 | 1 |
somatostatin secreting cell | 1.33e-07 | 1 |
pancreatic D cell | 1.33e-07 | 1 |
progenitor cell of endocrine pancreas | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.82e-14 | 4 |
bronchus cancer | 1.78e-08 | 7 |
bronchogenic carcinoma | 1.78e-08 | 7 |
somatostatinoma | 1.33e-07 | 1 |
lung cancer | 8.87e-07 | 15 |