FFCP PHASE1:Hg19::chr8:47529257..47529285,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:47529257..47529285,- | |||
|coexpression_cluster_id=C4758 | |coexpression_cluster_id=C4758 | ||
|description=CAGE_peak_at_chr8:47529257..47529285,- | |description=CAGE_peak_at_chr8:47529257..47529285,- | ||
|id=chr8:47529257..47529285,- | |id=chr8:47529257..47529285,- | ||
|ontology_enrichment_celltype=CL:0000039!7.89e-07!7;CL:0000586!7.89e-07!7 | |ontology_enrichment_celltype=CL:0000039!7.89e-07!7;CL:0000586!7.89e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.36e-15;7!CL:0000586;1.36e-15;7!CL:0000333;2.34e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.40e-15,7;CL:0000586,1.40e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.85e-07;10!UBERON:0005564;3.85e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!1.33e-14!239;DOID:162!5.10e-14!235;DOID:0050687!7.56e-14!143;DOID:3095!4.24e-09!22;DOID:2994!4.24e-09!22;DOID:5409!1.21e-07!4;DOID:305!3.62e-07!106;DOID:0050686!4.56e-07!137 | |ontology_enrichment_disease=DOID:14566!1.33e-14!239;DOID:162!5.10e-14!235;DOID:0050687!7.56e-14!143;DOID:3095!4.24e-09!22;DOID:2994!4.24e-09!22;DOID:5409!1.21e-07!4;DOID:305!3.62e-07!106;DOID:0050686!4.56e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.50e-14;22!DOID:2994;1.50e-14;22!DOID:1036;6.72e-13;8!DOID:5409;6.78e-11;4!DOID:4468;1.42e-09;2!DOID:1909;2.57e-09;2!DOID:171;3.76e-07;10!DOID:169;4.99e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.11e-15,235;DOID:14566,3.47e-15,239;DOID:3095,1.45e-14,22;DOID:2994,1.45e-14,22;DOID:0050687,7.07e-13,143;DOID:1036,7.26e-13,8;DOID:5409,6.79e-11,4;DOID:4468,1.72e-09,2;DOID:1909,2.52e-09,2;DOID:305,7.40e-08,106;DOID:0050686,8.84e-08,137;DOID:171,3.58e-07,10;DOID:169,4.84e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.07e-07!6;UBERON:0002358!5.07e-07!6;UBERON:0003684!5.07e-07!6;UBERON:0001178!5.07e-07!6 | |ontology_enrichment_uberon=UBERON:0003688!5.07e-07!6;UBERON:0002358!5.07e-07!6;UBERON:0003684!5.07e-07!6;UBERON:0001178!5.07e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.34e-08;5!UBERON:0002410;2.34e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.26e-08,5;UBERON:0002410,2.26e-08,5 | |||
|phase1_expression=0,0.856402095563933,0.986680828671798,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0.930584281657949,0,0.0974370051611986,1.00973509697646,0.552299391853796,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,3.83654933220156,1.12264037773229,0.256278298511402,1.53512174720011,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0.728364672026868,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,2.1060976908219,2.55779449753823,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,4.59774653409171,0,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,5.72941074387513,0,0,0,0,0.709163045303809,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,6.38075512743207,6.22522541847762,0,3.04212641381623,0,0.549585560411174,0,0,0,0,2.48155226678899,2.74487548044835,2.18168063068596,4.36433585265626,0,5.06395354867265,3.10142335502381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2382104792811,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0.0633107959558787,0,4.32857629358282,0,4.39581141080687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,5.25392132795769,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0.790446527591777,0.121792598380896,0,0,0.5013797880454,0,0,14.4489768550216,0,0,0,0,0,0,0,0,1.21319294033318,5.70930667089935,0.705797459094515,0,0,0,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,9.7894681802587,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,4.82201943050284,0,0,0,0,17.3936344972966,1.83302179374359,0.157265941855896,5.13285299502465,0,0,6.81646703424512,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,2.47736419030255,0,0.115525666150338,6.10211352747467,0,2.78482710962785,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0.31020638566432,0,3.57937381752935,0,0,0,0,0,0,5.38060765962843,0,21.6434565215175,0.11294608203896,5.38708532052603,13.7376187645673,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,1.2498775702396,4.94052820401969,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.546327859818478,0,4.07955318967927,5.87878291584233,0,16.5466975932968,0.303114792872958,0,0,0,0,0,0,0,5.8308568541919,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.856402095563933,0.986680828671798,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0.930584281657949,0,0.0974370051611986,1.00973509697646,0.552299391853796,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,3.83654933220156,1.12264037773229,0.256278298511402,1.53512174720011,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0.728364672026868,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,2.1060976908219,2.55779449753823,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,4.59774653409171,0,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,5.72941074387513,0,0,0,0,0.709163045303809,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,6.38075512743207,6.22522541847762,0,3.04212641381623,0,0.549585560411174,0,0,0,0,2.48155226678899,2.74487548044835,2.18168063068596,4.36433585265626,0,5.06395354867265,3.10142335502381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2382104792811,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0.0633107959558787,0,4.32857629358282,0,4.39581141080687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,5.25392132795769,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0.790446527591777,0.121792598380896,0,0,0.5013797880454,0,0,14.4489768550216,0,0,0,0,0,0,0,0,1.21319294033318,5.70930667089935,0.705797459094515,0,0,0,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,9.7894681802587,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,4.82201943050284,0,0,0,0,17.3936344972966,1.83302179374359,0.157265941855896,5.13285299502465,0,0,6.81646703424512,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,2.47736419030255,0,0.115525666150338,6.10211352747467,0,2.78482710962785,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0.31020638566432,0,3.57937381752935,0,0,0,0,0,0,5.38060765962843,0,21.6434565215175,0.11294608203896,5.38708532052603,13.7376187645673,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,1.2498775702396,4.94052820401969,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.546327859818478,0,4.07955318967927,5.87878291584233,0,16.5466975932968,0.303114792872958,0,0,0,0,0,0,0,5.8308568541919,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:47529257..47529285,- | |short_description=p@chr8:47529257..47529285,- | ||
}} | }} |
Latest revision as of 18:38, 31 July 2015
Short description: | p@chr8:47529257..47529285, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:47529257..47529285, - |
Coexpression cluster: | C4758_small_neuroblastoma_testicular_endometrial_maxillary_choriocarcinoma_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.40e-15 | 7 |
germ cell | 1.40e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.26e-08 | 5 |
autonomic nervous system | 2.26e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.11e-15 | 235 |
disease of cellular proliferation | 3.47e-15 | 239 |
germ cell and embryonal cancer | 1.45e-14 | 22 |
germ cell cancer | 1.45e-14 | 22 |
cell type cancer | 7.07e-13 | 143 |
chronic leukemia | 7.26e-13 | 8 |
lung small cell carcinoma | 6.79e-11 | 4 |
clear cell adenocarcinoma | 1.72e-09 | 2 |
melanoma | 2.52e-09 | 2 |
carcinoma | 7.40e-08 | 106 |
organ system cancer | 8.84e-08 | 137 |
neuroectodermal tumor | 3.58e-07 | 10 |
neuroendocrine tumor | 4.84e-07 | 6 |