FFCP PHASE1:Hg19::chr8:2970846..2970862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000520561_5end | |association_with_transcript=22bp_to_ENST00000520561_5end | ||
|cluster_id=chr8:2970846..2970862,- | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_18_at_CSMD1_5end | |description=CAGE_peak_18_at_CSMD1_5end | ||
|id=chr8:2970846..2970862,- | |id=chr8:2970846..2970862,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.74e-12;3!CL:0002138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.31e-12,3;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.14e-14;10!UBERON:0005564;3.14e-14;10!CL:0005022;8.72e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-11!115;UBERON:0006947!1.86e-07!3;UBERON:0004054!1.86e-07!3;UBERON:0003135!2.06e-07!11;UBERON:0000988!6.47e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.30e-11!115;UBERON:0006947!1.86e-07!3;UBERON:0004054!1.86e-07!3;UBERON:0003135!2.06e-07!11;UBERON:0000988!6.47e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;9.86e-18;2!UBERON:0000473;1.64e-17;8!UBERON:0003135;4.95e-13;11!UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0000991;2.73e-07;21!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.07e-18,2;UBERON:0000473,1.71e-17,8;UBERON:0003135,5.10e-13,11;UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0003296,1.44e-09,4;UBERON:0010133,1.44e-09,4;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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|short_description=p18@CSMD1 | |short_description=p18@CSMD1 | ||
}} | }} |
Latest revision as of 22:05, 17 September 2015
Short description: | p18@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CSMD1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 22bp_to_ENST00000520561_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.31e-12 | 3 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.07e-18 | 2 |
testis | 1.71e-17 | 8 |
male reproductive organ | 5.10e-13 | 11 |
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
gland of diencephalon | 1.44e-09 | 4 |
neuroendocrine gland | 1.44e-09 | 4 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |