FFCP PHASE1:Hg19::chr8:23159627..23159644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:23159627..23159644,- | |||
|coexpression_cluster_id=C608 | |coexpression_cluster_id=C608 | ||
|description=CAGE_peak_at_chr8:23159627..23159644,- | |description=CAGE_peak_at_chr8:23159627..23159644,- | ||
|id=chr8:23159627..23159644,- | |id=chr8:23159627..23159644,- | ||
|ontology_enrichment_celltype=CL:0000055!6.74e-23!180;CL:0000222!1.10e-15!119;CL:0000057!1.70e-14!75;CL:0000187!1.05e-12!54;CL:0000183!1.97e-12!59;CL:0000680!3.22e-12!57;CL:0000056!3.22e-12!57;CL:0000355!3.22e-12!57;CL:0000393!2.40e-11!60;CL:0000211!2.40e-11!60;CL:0000144!4.82e-11!625;CL:0002371!1.22e-09!591;CL:0000192!1.27e-09!42;CL:0000514!1.27e-09!42;CL:0000548!1.57e-09!679;CL:0000004!1.57e-09!679;CL:0000255!1.57e-09!679;CL:0000012!2.96e-09!682;CL:0002321!2.82e-08!248;CL:0000359!3.27e-08!32;CL:0000220!3.42e-08!246;CL:0000048!2.92e-07!430;CL:0000723!5.19e-07!436;CL:0000499!9.53e-07!27 | |ontology_enrichment_celltype=CL:0000055!6.74e-23!180;CL:0000222!1.10e-15!119;CL:0000057!1.70e-14!75;CL:0000187!1.05e-12!54;CL:0000183!1.97e-12!59;CL:0000680!3.22e-12!57;CL:0000056!3.22e-12!57;CL:0000355!3.22e-12!57;CL:0000393!2.40e-11!60;CL:0000211!2.40e-11!60;CL:0000144!4.82e-11!625;CL:0002371!1.22e-09!591;CL:0000192!1.27e-09!42;CL:0000514!1.27e-09!42;CL:0000548!1.57e-09!679;CL:0000004!1.57e-09!679;CL:0000255!1.57e-09!679;CL:0000012!2.96e-09!682;CL:0002321!2.82e-08!248;CL:0000359!3.27e-08!32;CL:0000220!3.42e-08!246;CL:0000048!2.92e-07!430;CL:0000723!5.19e-07!436;CL:0000499!9.53e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.40e-08;6!CL:0000098;1.40e-08;6!CL:0002167;1.40e-08;6!CL:0002569;5.16e-08;6!CL:0000632;1.34e-07;3!CL:0000135;2.34e-07;3!CL:0000346;2.34e-07;3!CL:1000428;2.34e-07;3!CL:0000388;2.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.48e-08,6;CL:0000098,1.48e-08,6;CL:0002167,1.48e-08,6;CL:0002569,6.75e-08,6;CL:0000135,1.35e-07,3;CL:0000388,1.35e-07,3;CL:0000632,1.39e-07,3;CL:0000346,2.50e-07,3;CL:1000428,2.50e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.31e-08!14 | |ontology_enrichment_disease=DOID:2394!1.31e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.23e-12!79;UBERON:0007798!1.23e-12!79;UBERON:0001981!1.09e-11!60;UBERON:0007500!1.09e-11!60;UBERON:0004537!1.09e-11!60;UBERON:0006965!1.09e-11!60;UBERON:0004872!2.04e-11!84;UBERON:0001637!2.64e-11!42;UBERON:0003509!2.64e-11!42;UBERON:0004572!2.64e-11!42;UBERON:0000914!8.88e-11!83;UBERON:0002329!8.88e-11!83;UBERON:0003077!8.88e-11!83;UBERON:0003059!8.88e-11!83;UBERON:0007282!8.88e-11!83;UBERON:0009618!8.88e-11!83;UBERON:0007285!8.88e-11!83;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0000490!1.49e-10!138;UBERON:0004290!2.02e-10!70;UBERON:0000055!2.78e-10!69;UBERON:0003914!4.33e-10!118;UBERON:0004535!4.47e-10!110;UBERON:0002385!4.88e-10!63;UBERON:0001015!4.88e-10!63;UBERON:0000383!4.88e-10!63;UBERON:0005256!5.92e-10!143;UBERON:0001009!1.98e-09!113;UBERON:0000486!3.85e-09!82;UBERON:0002100!3.30e-07!216;UBERON:0004573!7.35e-07!33;UBERON:0004571!7.35e-07!33 | |ontology_enrichment_uberon=UBERON:0002049!1.23e-12!79;UBERON:0007798!1.23e-12!79;UBERON:0001981!1.09e-11!60;UBERON:0007500!1.09e-11!60;UBERON:0004537!1.09e-11!60;UBERON:0006965!1.09e-11!60;UBERON:0004872!2.04e-11!84;UBERON:0001637!2.64e-11!42;UBERON:0003509!2.64e-11!42;UBERON:0004572!2.64e-11!42;UBERON:0000914!8.88e-11!83;UBERON:0002329!8.88e-11!83;UBERON:0003077!8.88e-11!83;UBERON:0003059!8.88e-11!83;UBERON:0007282!8.88e-11!83;UBERON:0009618!8.88e-11!83;UBERON:0007285!8.88e-11!83;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0000490!1.49e-10!138;UBERON:0004290!2.02e-10!70;UBERON:0000055!2.78e-10!69;UBERON:0003914!4.33e-10!118;UBERON:0004535!4.47e-10!110;UBERON:0002385!4.88e-10!63;UBERON:0001015!4.88e-10!63;UBERON:0000383!4.88e-10!63;UBERON:0005256!5.92e-10!143;UBERON:0001009!1.98e-09!113;UBERON:0000486!3.85e-09!82;UBERON:0002100!3.30e-07!216;UBERON:0004573!7.35e-07!33;UBERON:0004571!7.35e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;5.16e-08;6!UBERON:0007846;2.34e-07;3!UBERON:0000043;2.34e-07;3!UBERON:0007845;2.34e-07;3!UBERON:0000412;2.34e-07;3!UBERON:0001992;2.34e-07;3!UBERON:0003104;6.31e-07;7!UBERON:0009142;6.31e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,6.75e-08,6;UBERON:0007846,1.35e-07,3;UBERON:0000043,1.35e-07,3;UBERON:0007845,1.35e-07,3;UBERON:0000412,2.50e-07,3;UBERON:0001992,2.50e-07,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,2.43317435151318,0,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,1.67799774483962,1.6507082516404,0,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0.367663080345869,3.24056779152704,0.0892997282840798,0,0,0,0,0.732806975721629,0,0,0,2.48485975847659,0.12663051166458,0.662045904066094,0.573673241497627,0,1.12135520028461,0,2.22000793575444,0,0.134710672069688,0.326923806226917,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.491337269247072,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0,0,0.438977620880838,0.919463387397059,0.150238058906597,0.453728732640084,0.89694817844431,0.640672166455702,0.423863802319124,0.600182192168805,0,1.54584324027377,0.18611685633159,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.201504196455281,0.508681776931463,0,0,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0.330881918197182,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.857867961948885,0,0,0.65147236858747,0.355391948742546,3.95975936466715,0.301439377059586,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,4.15941723061614,7.85087550707512,3.15404830067869,0.819989904948992,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.640695746278505,0,0.804269605718038,0,0.925258162815933,0.710246901252508,0,0.519254429183621,0.348631135379878,0,0.40101294060657,0,0.34444334449382,0,0.524497659837696,0,0.231046011313244,0,0,0.316654886678627,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.895499018888713,0,0,0,0,0,0,0.0915694648183434,0,0,0,3.21367859688319,0.193341436584244,0.616194468458578,0.307007349452259,0,0.107420244868274,0.435050081742686,0.170453254832202,0.267096106940212,0,0,0,0,0.464845549297286,1.88887408098384,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0.78494864019923,0.179872457583315,0,0.353437207037059,0,3.17020642346017,0,0,0.974853958525138,0,0.9554993798559,0.282810863907425,1.13008116620243,0.551365343546124,1.99031692572366,0,0.578775534266688,0,1.21746226177622,0.30982349809975,0.281695602532241,0.286822704408103,0.589494246078727,0.35667105148125,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.687944129886466,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.701139929541673,0,0.568209015825267,0,0,0.228840068396924,0,0.310874401165561,0,0.63718706865481,0,0.621051827505038,0,1.86089200190596,1.5652351854352,1.95334891696384,1.14241563650639,0.813741466409323,0.909243296012797,0.859284456339908,0.928067519756987,0.796191777397232,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0.303859956177382,0,0,0,0,1.31043939538565,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0.150420656698515,1.21023041222112,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.647782773655864,0.9555033757741,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr8:23159627..23159644,- | |short_description=p@chr8:23159627..23159644,- | ||
}} | }} |
Latest revision as of 17:07, 31 July 2015
Short description: | p@chr8:23159627..23159644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23159627..23159644, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.48e-08 | 6 |
sensory epithelial cell | 1.48e-08 | 6 |
olfactory epithelial cell | 1.48e-08 | 6 |
mesenchymal stem cell of umbilical cord | 6.75e-08 | 6 |
fibrocyte | 1.35e-07 | 3 |
tendon cell | 1.35e-07 | 3 |
hepatic stellate cell | 1.39e-07 | 3 |
hair follicle dermal papilla cell | 2.50e-07 | 3 |
stem cell of epidermis | 2.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 6.75e-08 | 6 |
dense regular connective tissue | 1.35e-07 | 3 |
tendon | 1.35e-07 | 3 |
regular connective tissue | 1.35e-07 | 3 |
dermal papilla | 2.50e-07 | 3 |
papillary layer of dermis | 2.50e-07 | 3 |