FFCP PHASE1:Hg19::chr8:18248756..18248767,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10 | |EntrezGene=10 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7646 | |HGNC=7646 | ||
|TSSclassifier=strong | |||
|UniProt=P11245,A4Z6T7 | |UniProt=P11245,A4Z6T7 | ||
|association_with_transcript=1bp_to_ENST00000286479,NM_000015,uc003wyw.1_5end | |association_with_transcript=1bp_to_ENST00000286479,NM_000015,uc003wyw.1_5end | ||
|cluster_id=chr8:18248756..18248767,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_NAT2_5end | |description=CAGE_peak_2_at_NAT2_5end | ||
|id=chr8:18248756..18248767,+ | |id=chr8:18248756..18248767,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.44e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.56e-15;1!UBERON:0002107;1.57e-12;19!UBERON:0006925;1.57e-12;19!UBERON:0002108;2.99e-12;4!UBERON:0002423;1.39e-09;25!UBERON:0002365;5.05e-08;31!UBERON:0002330;5.05e-08;31!UBERON:0000160;1.26e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.66e-15,1;UBERON:0002107,1.57e-12,19;UBERON:0006925,1.57e-12,19;UBERON:0008836,1.57e-12,19;UBERON:0002108,2.52e-12,4;UBERON:0008835,7.39e-11,22;UBERON:0003894,7.39e-11,22;UBERON:0009854,2.14e-10,23;UBERON:0007499,1.39e-09,25;UBERON:0009497,1.39e-09,25;UBERON:0000015,1.39e-09,25;UBERON:0002423,1.39e-09,25;UBERON:0006235,1.39e-09,25;UBERON:0004161,1.39e-09,25;UBERON:0009856,3.18e-09,26;UBERON:0002365,9.03e-08,31;UBERON:0002330,9.03e-08,31;UBERON:0000160,1.14e-07,17;UBERON:0002368,6.65e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,6.87979051674338,5.90789906681404,0,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.825236619583403,0,0,0,0.182248669974074,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,13.3362532647055,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,1.52322084867518,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,1.31570429747224,0.706756583783524,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0.0887023701626388,0,0,0.203909198930495,0,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,1.92935395269862,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,2.645134202577,0,0,0,0.126166424835079,0.109265571963696,0.506794004045748,0,0,0,0,0.303114792872958,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,6.87979051674338,5.90789906681404,0,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.825236619583403,0,0,0,0.182248669974074,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,13.3362532647055,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,1.52322084867518,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,1.31570429747224,0.706756583783524,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0.0887023701626388,0,0,0.203909198930495,0,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,1.92935395269862,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,2.645134202577,0,0,0,0.126166424835079,0.109265571963696,0.506794004045748,0,0,0,0,0.303114792872958,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p2@NAT2 | |short_description=p2@NAT2 | ||
}} | }} |
Latest revision as of 06:12, 17 September 2015
Short description: | p2@NAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 1bp_to_ENST00000286479, NM_000015, uc003wyw.1_5end |
EntrezGene: | NAT2 |
HGNC: | 7646 |
UniProt: | P11245A4Z6T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.66e-15 | 1 |
liver | 1.57e-12 | 19 |
digestive gland | 1.57e-12 | 19 |
liver bud | 1.57e-12 | 19 |
small intestine | 2.52e-12 | 4 |
hepatic diverticulum | 7.39e-11 | 22 |
liver primordium | 7.39e-11 | 22 |
digestive tract diverticulum | 2.14e-10 | 23 |
epithelial sac | 1.39e-09 | 25 |
epithelium of foregut-midgut junction | 1.39e-09 | 25 |
anatomical boundary | 1.39e-09 | 25 |
hepatobiliary system | 1.39e-09 | 25 |
foregut-midgut junction | 1.39e-09 | 25 |
septum transversum | 1.39e-09 | 25 |
sac | 3.18e-09 | 26 |
exocrine gland | 9.03e-08 | 31 |
exocrine system | 9.03e-08 | 31 |
intestine | 1.14e-07 | 17 |
endocrine gland | 6.65e-07 | 35 |