FFCP PHASE1:Hg19::chr8:128306934..128306945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:128306934..128306945,- | |||
|coexpression_cluster_id=C4726 | |coexpression_cluster_id=C4726 | ||
|description=CAGE_peak_at_chr8:128306934..128306945,- | |description=CAGE_peak_at_chr8:128306934..128306945,- | ||
|id=chr8:128306934..128306945,- | |id=chr8:128306934..128306945,- | ||
|ontology_enrichment_celltype=CL:0000066!1.70e-32!254;CL:0002076!2.74e-26!43;CL:0000223!5.21e-21!59;CL:0000220!1.68e-15!246;CL:0002321!3.34e-15!248;CL:0002368!1.93e-11!13;CL:0002149!7.73e-10!6;CL:0002255!7.73e-10!6;CL:0000548!1.34e-09!679;CL:0000004!1.34e-09!679;CL:0000255!1.34e-09!679;CL:0000012!2.14e-09!682;CL:0000076!7.59e-09!62;CL:0002251!8.78e-09!21;CL:0002202!1.93e-07!9;CL:0002632!1.93e-07!9;CL:0000003!7.46e-07!722 | |ontology_enrichment_celltype=CL:0000066!1.70e-32!254;CL:0002076!2.74e-26!43;CL:0000223!5.21e-21!59;CL:0000220!1.68e-15!246;CL:0002321!3.34e-15!248;CL:0002368!1.93e-11!13;CL:0002149!7.73e-10!6;CL:0002255!7.73e-10!6;CL:0000548!1.34e-09!679;CL:0000004!1.34e-09!679;CL:0000255!1.34e-09!679;CL:0000012!2.14e-09!682;CL:0000076!7.59e-09!62;CL:0002251!8.78e-09!21;CL:0002202!1.93e-07!9;CL:0002632!1.93e-07!9;CL:0000003!7.46e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.12e-10;6!CL:0002255;1.12e-10;6!CL:0002328;1.12e-09;3!CL:0002076;6.38e-08;42!CL:0000083;6.75e-08;4!CL:0002336;7.09e-08;1!CL:0002261;7.09e-08;1!CL:0002170;7.09e-08;1!CL:0002327;1.81e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.17e-16,253;CL:0000223,5.77e-12,58;CL:0002076,2.14e-11,42;CL:0002149,7.39e-11,6;CL:0002255,7.39e-11,6;CL:0002328,1.12e-09,3;CL:0000083,7.36e-08,4;CL:0002336,9.94e-08,1;CL:0002261,9.94e-08,1;CL:0002170,9.94e-08,1;CL:0002327,2.00e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.79e-19!106;DOID:1749!2.15e-14!14;DOID:0050687!4.12e-12!143;DOID:299!5.45e-11!25;DOID:3001!7.73e-10!6 | |ontology_enrichment_disease=DOID:305!2.79e-19!106;DOID:1749!2.15e-14!14;DOID:0050687!4.12e-12!143;DOID:299!5.45e-11!25;DOID:3001!7.73e-10!6 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.97e-17;14!DOID:299;7.10e-16;25!DOID:4074;6.21e-15;2!DOID:4905;6.21e-15;2!DOID:3498;6.21e-15;2!DOID:3493;4.61e-14;2!DOID:3001;1.12e-10;6!DOID:1793;6.75e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.95e-17,14;DOID:305,3.99e-17,106;DOID:299,6.62e-16,25;DOID:4074,7.40e-15,2;DOID:4905,7.40e-15,2;DOID:3498,7.40e-15,2;DOID:3493,6.45e-14,2;DOID:0050687,9.20e-12,143;DOID:3001,7.39e-11,6;DOID:1793,7.36e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000065!3.47e-14!53;UBERON:0001004!9.83e-14!72;UBERON:0000072!2.24e-12!46;UBERON:0004119!1.68e-11!169;UBERON:0000925!1.68e-11!169;UBERON:0006595!1.68e-11!169;UBERON:0008947!5.08e-11!38;UBERON:0003258!5.08e-11!38;UBERON:0007196!1.71e-10!14;UBERON:0001558!1.71e-10!14;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0003104!3.46e-08!238;UBERON:0009142!3.46e-08!238;UBERON:0001041!8.76e-08!98;UBERON:0000077!1.23e-07!130;UBERON:0004921!1.33e-07!129;UBERON:0004185!1.33e-07!129;UBERON:0000481!3.45e-07!347;UBERON:0005178!7.45e-07!34;UBERON:0002224!7.45e-07!34;UBERON:0001737!7.78e-07!9;UBERON:0005153!9.57e-07!37 | |ontology_enrichment_uberon=UBERON:0000065!3.47e-14!53;UBERON:0001004!9.83e-14!72;UBERON:0000072!2.24e-12!46;UBERON:0004119!1.68e-11!169;UBERON:0000925!1.68e-11!169;UBERON:0006595!1.68e-11!169;UBERON:0008947!5.08e-11!38;UBERON:0003258!5.08e-11!38;UBERON:0007196!1.71e-10!14;UBERON:0001558!1.71e-10!14;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0003104!3.46e-08!238;UBERON:0009142!3.46e-08!238;UBERON:0001041!8.76e-08!98;UBERON:0000077!1.23e-07!130;UBERON:0004921!1.33e-07!129;UBERON:0004185!1.33e-07!129;UBERON:0000481!3.45e-07!347;UBERON:0005178!7.45e-07!34;UBERON:0002224!7.45e-07!34;UBERON:0001737!7.78e-07!9;UBERON:0005153!9.57e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.12e-09;3!UBERON:0002031;1.12e-09;3!UBERON:0004913;7.09e-08;1!UBERON:0003703;7.09e-08;1!UBERON:0001174;7.09e-08;1!UBERON:0004914;7.09e-08;1!UBERON:0002394;1.22e-07;4!UBERON:0003928;1.22e-07;4!UBERON:0001911;1.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.12e-09,3;UBERON:0002031,1.12e-09,3;UBERON:0004913,1.21e-07,1;UBERON:0003703,1.21e-07,1;UBERON:0001174,1.21e-07,1;UBERON:0004914,1.21e-07,1;UBERON:0001911,2.00e-07,4;UBERON:0005333,2.00e-07,4;UBERON:0008425,2.00e-07,4;UBERON:0005311,2.00e-07,4 | |||
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|short_description=p@chr8:128306934..128306945,- | |short_description=p@chr8:128306934..128306945,- | ||
}} | }} |
Latest revision as of 14:53, 31 July 2015
Short description: | p@chr8:128306934..128306945, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128306934..128306945, - |
Coexpression cluster: | C4726_clear_oral_giant_anaplastic_ductal_squamous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.17e-16 | 253 |
endodermal cell | 5.77e-12 | 58 |
endo-epithelial cell | 2.14e-11 | 42 |
epithelial cell of uterus | 7.39e-11 | 6 |
stromal cell of endometrium | 7.39e-11 | 6 |
bronchial epithelial cell | 1.12e-09 | 3 |
epithelial cell of pancreas | 7.36e-08 | 4 |
buccal mucosa cell | 9.94e-08 | 1 |
endothelial cell of viscerocranial mucosa | 9.94e-08 | 1 |
keratinized cell of the oral mucosa | 9.94e-08 | 1 |
mammary gland epithelial cell | 2.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.12e-09 | 3 |
epithelium of bronchus | 1.12e-09 | 3 |
hepatopancreatic ampulla | 1.21e-07 | 1 |
extrahepatic bile duct | 1.21e-07 | 1 |
common bile duct | 1.21e-07 | 1 |
duodenal papilla | 1.21e-07 | 1 |
mammary gland | 2.00e-07 | 4 |
mammary bud | 2.00e-07 | 4 |
mammary ridge | 2.00e-07 | 4 |
mammary placode | 2.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.95e-17 | 14 |
carcinoma | 3.99e-17 | 106 |
adenocarcinoma | 6.62e-16 | 25 |
pancreas adenocarcinoma | 7.40e-15 | 2 |
pancreatic carcinoma | 7.40e-15 | 2 |
pancreatic ductal adenocarcinoma | 7.40e-15 | 2 |
signet ring cell adenocarcinoma | 6.45e-14 | 2 |
cell type cancer | 9.20e-12 | 143 |
female reproductive endometrioid cancer | 7.39e-11 | 6 |
pancreatic cancer | 7.36e-08 | 4 |