FFCP PHASE1:Hg19::chr7:45953105..45953110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45953105..45953110,+ | |||
|coexpression_cluster_id=C4616 | |coexpression_cluster_id=C4616 | ||
|description=CAGE_peak_at_chr7:45953105..45953110,+ | |description=CAGE_peak_at_chr7:45953105..45953110,+ | ||
|id=chr7:45953105..45953110,+ | |id=chr7:45953105..45953110,+ | ||
|ontology_enrichment_celltype=CL:0000153!3.66e-15!9;CL:0000447!3.66e-15!9;CL:0000057!7.63e-15!75;CL:0002620!5.19e-14!23;CL:0000327!1.18e-09!14;CL:0000667!4.43e-09!6;CL:0000058!4.43e-09!6;CL:0000138!4.43e-09!6;CL:0000055!2.01e-08!180;CL:0000214!5.64e-08!3;CL:0000499!9.01e-07!27 | |ontology_enrichment_celltype=CL:0000153!3.66e-15!9;CL:0000447!3.66e-15!9;CL:0000057!7.63e-15!75;CL:0002620!5.19e-14!23;CL:0000327!1.18e-09!14;CL:0000667!4.43e-09!6;CL:0000058!4.43e-09!6;CL:0000138!4.43e-09!6;CL:0000055!2.01e-08!180;CL:0000214!5.64e-08!3;CL:0000499!9.01e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.22e-27;6!CL:0000153;1.18e-18;9!CL:0000447;1.18e-18;9!CL:0002620;2.93e-16;23!CL:0000327;1.24e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.08e-27,6;CL:0000138,2.08e-27,6;CL:0000153,1.13e-18,9;CL:0000447,1.13e-18,9;CL:0002620,3.01e-16,23;CL:0000327,1.21e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.10e-09;5!DOID:450;3.10e-09;5!DOID:66;3.10e-09;5!DOID:423;3.10e-09;5!DOID:0080000;3.10e-09;5!DOID:11722;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.74e-09,5;DOID:450,2.74e-09,5;DOID:66,2.74e-09,5;DOID:423,2.74e-09,5;DOID:0080000,2.74e-09,5;DOID:11722,2.74e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.78e-08!45;UBERON:0002416!2.78e-08!45;UBERON:0006915!5.64e-08!3;UBERON:0002018!5.64e-08!3;UBERON:0002217!5.64e-08!3;UBERON:0007616!5.64e-08!3;UBERON:0002097!1.58e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!2.78e-08!45;UBERON:0002416!2.78e-08!45;UBERON:0006915!5.64e-08!3;UBERON:0002018!5.64e-08!3;UBERON:0002217!5.64e-08!3;UBERON:0007616!5.64e-08!3;UBERON:0002097!1.58e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.59e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.75e-09,41;UBERON:0002199,1.55e-08,46;UBERON:0002416,1.55e-08,46 | |||
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|short_description=p@chr7:45953105..45953110,+ | |short_description=p@chr7:45953105..45953110,+ | ||
}} | }} |
Latest revision as of 10:25, 31 July 2015
Short description: | p@chr7:45953105..45953110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45953105..45953110, + |
Coexpression cluster: | C4616_Chondrocyte_Fibroblast_Synoviocyte_mesothelioma_renal_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.08e-27 | 6 |
chondrocyte | 2.08e-27 | 6 |
GAG secreting cell | 1.13e-18 | 9 |
carbohydrate secreting cell | 1.13e-18 | 9 |
skin fibroblast | 3.01e-16 | 23 |
extracellular matrix secreting cell | 1.21e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.75e-09 | 41 |
integument | 1.55e-08 | 46 |
integumental system | 1.55e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.74e-09 | 5 |
myotonic disease | 2.74e-09 | 5 |
muscle tissue disease | 2.74e-09 | 5 |
myopathy | 2.74e-09 | 5 |
muscular disease | 2.74e-09 | 5 |
myotonic dystrophy | 2.74e-09 | 5 |