FFCP PHASE1:Hg19::chr7:45928011..45928026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3484 | |EntrezGene=3484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |HGNC=5469 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXF9,C1K3N3,P08833 | |UniProt=C9JXF9,C1K3N3,P08833 | ||
|association_with_transcript=52bp_to_ENST00000457280,NM_000596,uc003tno.3,uc003tnp.2,uc010kyn.2_5end | |association_with_transcript=52bp_to_ENST00000457280,NM_000596,uc003tno.3,uc003tnp.2,uc010kyn.2_5end | ||
|cluster_id=chr7:45928011..45928026,+ | |||
|coexpression_cluster_id=C4688 | |coexpression_cluster_id=C4688 | ||
|description=CAGE_peak_4_at_IGFBP1_5end | |description=CAGE_peak_4_at_IGFBP1_5end | ||
|id=chr7:45928011..45928026,+ | |id=chr7:45928011..45928026,+ | ||
|ontology_enrichment_celltype=CL:0000515!7.05e-11!4;CL:0002590!8.53e-09!3;CL:0000181!3.14e-07!12;CL:0000417!3.14e-07!12;CL:0000668!3.14e-07!12;CL:0000414!3.14e-07!12;CL:0000412!3.14e-07!12;CL:0000182!3.14e-07!12 | |ontology_enrichment_celltype=CL:0000515!7.05e-11!4;CL:0002590!8.53e-09!3;CL:0000181!3.14e-07!12;CL:0000417!3.14e-07!12;CL:0000668!3.14e-07!12;CL:0000414!3.14e-07!12;CL:0000412!3.14e-07!12;CL:0000182!3.14e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.12e-23;3!CL:0002174;1.03e-17;1!CL:0000228;1.03e-17;1!CL:0002372;1.03e-17;1!CL:0000501;1.03e-17;1!CL:0000650;1.57e-09;2!CL:1000500;1.57e-09;2!CL:1000618;1.57e-09;2!CL:1001318;1.57e-09;2!CL:0002173;1.57e-09;2!CL:0000349;1.62e-08;19!CL:0000174;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.94e-23,3;CL:0000228,7.37e-18,1;CL:0002372,7.37e-18,1;CL:0002174,1.03e-17,1;CL:0000501,1.03e-17,1;CL:0000650,2.02e-09,2;CL:1000500,2.02e-09,2;CL:1000618,2.02e-09,2;CL:1001318,2.02e-09,2;CL:0002173,2.02e-09,2;CL:0000349,1.53e-08,19;CL:0000174,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.66e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005284!1.03e-08!5;UBERON:0008835!3.37e-08!22;UBERON:0003894!3.37e-08!22;UBERON:0002107!9.00e-08!19;UBERON:0006925!9.00e-08!19;UBERON:0008836!9.00e-08!19;UBERON:0009854!9.08e-08!23;UBERON:0000988!9.92e-08!3;UBERON:0003124!4.91e-07!7;UBERON:0007499!5.16e-07!25;UBERON:0009497!5.16e-07!25;UBERON:0000015!5.16e-07!25;UBERON:0002423!5.16e-07!25;UBERON:0006235!5.16e-07!25;UBERON:0004161!5.16e-07!25;UBERON:0001041!8.13e-07!98 | |ontology_enrichment_uberon=UBERON:0005284!1.03e-08!5;UBERON:0008835!3.37e-08!22;UBERON:0003894!3.37e-08!22;UBERON:0002107!9.00e-08!19;UBERON:0006925!9.00e-08!19;UBERON:0008836!9.00e-08!19;UBERON:0009854!9.08e-08!23;UBERON:0000988!9.92e-08!3;UBERON:0003124!4.91e-07!7;UBERON:0007499!5.16e-07!25;UBERON:0009497!5.16e-07!25;UBERON:0000015!5.16e-07!25;UBERON:0002423!5.16e-07!25;UBERON:0006235!5.16e-07!25;UBERON:0004161!5.16e-07!25;UBERON:0001041!8.13e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.12e-23;3!UBERON:0000920;4.12e-23;3!UBERON:0000478;1.72e-11;24!UBERON:0003567;1.57e-09;2!UBERON:0003838;1.57e-09;2!UBERON:0003586;1.57e-09;2!UBERON:0005169;1.57e-09;2!UBERON:0002321;1.57e-09;2!UBERON:0005215;1.57e-09;2!UBERON:0002303;1.57e-09;2!UBERON:0002319;1.57e-09;2!UBERON:0005631;1.33e-07;10!UBERON:0000158;1.33e-07;10!UBERON:0001264;1.42e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.94e-23,3;UBERON:0003124,3.21e-22,7;UBERON:0000478,1.63e-11,24;UBERON:0005631,1.91e-11,14;UBERON:0000158,1.91e-11,14;UBERON:0003567,2.02e-09,2;UBERON:0003838,2.02e-09,2;UBERON:0003586,2.02e-09,2;UBERON:0005169,2.02e-09,2;UBERON:0002321,2.02e-09,2;UBERON:0005215,2.02e-09,2;UBERON:0002303,2.02e-09,2;UBERON:0002319,2.02e-09,2;UBERON:0001264,1.47e-07,10 | |||
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| ||
|short_description=p4@IGFBP1 | |short_description=p4@IGFBP1 | ||
}} | }} |
Latest revision as of 19:03, 18 September 2015
Short description: | p4@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IGFBP1_5end |
Coexpression cluster: | C4688_tubular_placenta_chorionic_liver_Multipotent_lung_mesenchymal |
Association with transcript: | 52bp_to_ENST00000457280, NM_000596, uc003tno.3, uc003tnp.2, uc010kyn.2_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9JXF9C1K3N3P08833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.94e-23 | 3 |
multinucleate cell | 7.37e-18 | 1 |
myotube | 7.37e-18 | 1 |
follicular cell of ovary | 1.03e-17 | 1 |
granulosa cell | 1.03e-17 | 1 |
mesangial cell | 2.02e-09 | 2 |
kidney interstitial cell | 2.02e-09 | 2 |
juxtaglomerular complex cell | 2.02e-09 | 2 |
renal interstitial pericyte | 2.02e-09 | 2 |
extraglomerular mesangial cell | 2.02e-09 | 2 |
extraembryonic cell | 1.53e-08 | 19 |
steroid hormone secreting cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.94e-23 | 3 |
chorion | 3.21e-22 | 7 |
extraembryonic structure | 1.63e-11 | 24 |
extraembryonic membrane | 1.91e-11 | 14 |
membranous layer | 1.91e-11 | 14 |
abdomen connective tissue | 2.02e-09 | 2 |
abdominal segment connective tissue | 2.02e-09 | 2 |
trunk connective tissue | 2.02e-09 | 2 |
interstitial tissue | 2.02e-09 | 2 |
extraglomerular mesangium | 2.02e-09 | 2 |
kidney interstitium | 2.02e-09 | 2 |
juxtaglomerular apparatus | 2.02e-09 | 2 |
mesangium | 2.02e-09 | 2 |
pancreas | 1.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.03e-09 | 2 |