FFCP PHASE1:Hg19::chr7:30633799..30633810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2617 | |EntrezGene=2617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4162 | |HGNC=4162 | ||
|TSSclassifier=strong | |||
|UniProt=P41250 | |UniProt=P41250 | ||
|association_with_transcript=-370bp_to_NM_002047,uc003tbm.2_5end | |association_with_transcript=-370bp_to_NM_002047,uc003tbm.2_5end | ||
|cluster_id=chr7:30633799..30633810,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_12_at_GARS_5end | |description=CAGE_peak_12_at_GARS_5end | ||
|id=chr7:30633799..30633810,+ | |id=chr7:30633799..30633810,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.90e-71!42;CL:0000860!4.55e-68!45;CL:0000766!1.83e-58!76;CL:0000557!2.54e-58!71;CL:0000839!3.27e-54!70;CL:0000738!3.68e-53!140;CL:0002009!4.62e-53!65;CL:0002194!5.14e-50!63;CL:0000576!5.14e-50!63;CL:0000040!5.14e-50!63;CL:0000559!5.14e-50!63;CL:0002031!2.40e-49!124;CL:0000763!1.06e-43!112;CL:0000049!1.06e-43!112;CL:0002087!1.32e-43!119;CL:0000988!2.77e-43!182;CL:0000037!4.16e-43!172;CL:0000566!4.16e-43!172;CL:0002032!5.36e-43!165;CL:0000837!5.36e-43!165;CL:0000134!2.85e-16!358;CL:0002393!5.04e-16!9;CL:0002397!5.04e-16!9;CL:0002320!1.69e-15!365;CL:0000219!2.40e-13!390;CL:0000723!3.10e-12!436;CL:0000048!3.14e-12!430;CL:0000034!4.43e-12!444;CL:0002274!1.18e-07!5;CL:0000457!1.18e-07!5;CL:0002191!1.18e-07!5;CL:0000097!1.18e-07!5;CL:0000831!1.18e-07!5;CL:0002028!1.18e-07!5;CL:0002371!8.63e-07!591 | |ontology_enrichment_celltype=CL:0002057!5.90e-71!42;CL:0000860!4.55e-68!45;CL:0000766!1.83e-58!76;CL:0000557!2.54e-58!71;CL:0000839!3.27e-54!70;CL:0000738!3.68e-53!140;CL:0002009!4.62e-53!65;CL:0002194!5.14e-50!63;CL:0000576!5.14e-50!63;CL:0000040!5.14e-50!63;CL:0000559!5.14e-50!63;CL:0002031!2.40e-49!124;CL:0000763!1.06e-43!112;CL:0000049!1.06e-43!112;CL:0002087!1.32e-43!119;CL:0000988!2.77e-43!182;CL:0000037!4.16e-43!172;CL:0000566!4.16e-43!172;CL:0002032!5.36e-43!165;CL:0000837!5.36e-43!165;CL:0000134!2.85e-16!358;CL:0002393!5.04e-16!9;CL:0002397!5.04e-16!9;CL:0002320!1.69e-15!365;CL:0000219!2.40e-13!390;CL:0000723!3.10e-12!436;CL:0000048!3.14e-12!430;CL:0000034!4.43e-12!444;CL:0002274!1.18e-07!5;CL:0000457!1.18e-07!5;CL:0002191!1.18e-07!5;CL:0000097!1.18e-07!5;CL:0000831!1.18e-07!5;CL:0002028!1.18e-07!5;CL:0002371!8.63e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.94e-113;33!CL:0002057;7.94e-113;33!CL:0000473;1.09e-80;39!CL:0000234;1.09e-80;39!CL:0000576;6.48e-74;48!CL:0000766;3.38e-49;69!CL:0002393;5.31e-24;6!CL:0002397;5.31e-24;6!CL:0000763;1.23e-17;100!CL:0002087;8.27e-16;104!CL:0000738;5.61e-11;136!CL:0000767;8.08e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.52e-134,42;CL:0002057,2.52e-134,42;CL:0000473,7.71e-117,48;CL:0000234,7.71e-117,48;CL:0002009,4.42e-95,61;CL:0002194,2.38e-92,59;CL:0000576,2.38e-92,59;CL:0000040,2.38e-92,59;CL:0000559,2.38e-92,59;CL:0000557,3.43e-86,67;CL:0000766,2.25e-85,72;CL:0000839,4.11e-82,66;CL:0000763,7.49e-59,108;CL:0000049,7.49e-59,108;CL:0002031,6.52e-46,120;CL:0000738,1.25e-45,136;CL:0002087,5.27e-45,115;CL:0002032,1.12e-37,161;CL:0000837,1.12e-37,161;CL:0000037,7.17e-36,168;CL:0000988,9.33e-34,177;CL:0002393,4.44e-16,9;CL:0002397,4.44e-16,9;CL:0000134,6.99e-14,354;CL:0002320,1.71e-13,361;CL:0000219,4.04e-12,386;CL:0000048,1.94e-10,427;CL:0000723,3.31e-10,433;CL:0000034,6.61e-10,441;CL:0000767,7.20e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-96;42!CL:0000049;3.23e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.91e-50!80;UBERON:0001474!7.01e-47!86;UBERON:0002390!1.03e-46!102;UBERON:0003061!1.03e-46!102;UBERON:0002193!2.65e-42!112;UBERON:0004765!2.40e-37!101;UBERON:0001434!2.40e-37!101;UBERON:0002405!3.45e-33!115;UBERON:0002204!2.60e-20!167;UBERON:0003081!3.48e-16!216;UBERON:0002384!4.42e-15!375 | |ontology_enrichment_uberon=UBERON:0002371!7.91e-50!80;UBERON:0001474!7.01e-47!86;UBERON:0002390!1.03e-46!102;UBERON:0003061!1.03e-46!102;UBERON:0002193!2.65e-42!112;UBERON:0004765!2.40e-37!101;UBERON:0001434!2.40e-37!101;UBERON:0002405!3.45e-33!115;UBERON:0002204!2.60e-20!167;UBERON:0003081!3.48e-16!216;UBERON:0002384!4.42e-15!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.89e-75,76;UBERON:0001474,1.39e-69,82;UBERON:0004765,5.84e-63,90;UBERON:0002405,9.12e-61,93;UBERON:0002390,2.09e-57,98;UBERON:0003061,2.09e-57,98;UBERON:0001434,3.73e-56,100;UBERON:0002193,1.31e-51,108;UBERON:0002204,2.02e-31,167;UBERON:0003081,8.03e-25,203;UBERON:0000926,7.27e-14,315;UBERON:0004120,7.27e-14,315;UBERON:0006603,7.27e-14,315;UBERON:0002384,5.82e-13,371 | |||
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|short_description=p12@GARS | |short_description=p12@GARS | ||
}} | }} |
Latest revision as of 06:19, 18 September 2015
Short description: | p12@GARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GARS_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -370bp_to_NM_002047, uc003tbm.2_5end |
EntrezGene: | GARS |
HGNC: | 4162 |
UniProt: | P41250 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.89e-75 | 76 |
bone element | 1.39e-69 | 82 |
skeletal element | 5.84e-63 | 90 |
immune system | 9.12e-61 | 93 |
hematopoietic system | 2.09e-57 | 98 |
blood island | 2.09e-57 | 98 |
skeletal system | 3.73e-56 | 100 |
hemolymphoid system | 1.31e-51 | 108 |
musculoskeletal system | 2.02e-31 | 167 |
lateral plate mesoderm | 8.03e-25 | 203 |
mesoderm | 7.27e-14 | 315 |
mesoderm-derived structure | 7.27e-14 | 315 |
presumptive mesoderm | 7.27e-14 | 315 |
connective tissue | 5.82e-13 | 371 |