FFCP PHASE1:Hg19::chr7:12134329..12134354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:12134329..12134354,- | |||
|coexpression_cluster_id=C311 | |coexpression_cluster_id=C311 | ||
|description=CAGE_peak_at_chr7:12134329..12134354,- | |description=CAGE_peak_at_chr7:12134329..12134354,- | ||
|id=chr7:12134329..12134354,- | |id=chr7:12134329..12134354,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.04e-14;10 | |||
|ontology_enrichment_disease=DOID:0060072!1.37e-12!4;DOID:0060084!3.07e-08!3;DOID:127!3.07e-08!3 | |ontology_enrichment_disease=DOID:0060072!1.37e-12!4;DOID:0060084!3.07e-08!3;DOID:127!3.07e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.77e-45;3!DOID:127;9.77e-45;3!DOID:0060072;7.07e-34;4!DOID:3001;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.77e-45,3;DOID:127,9.77e-45,3;DOID:0060072,7.07e-34,4;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.45e-11!2;UBERON:0001017!1.09e-08!82;UBERON:0000995!2.07e-08!21;UBERON:0001049!2.88e-08!57;UBERON:0005068!2.88e-08!57;UBERON:0006241!2.88e-08!57;UBERON:0007135!2.88e-08!57;UBERON:0005743!3.62e-08!86;UBERON:0005795!5.33e-08!22;UBERON:0003975!5.33e-08!22;UBERON:0002240!7.28e-08!3;UBERON:0001950!8.43e-08!20;UBERON:0000073!3.74e-07!94;UBERON:0001016!3.74e-07!94;UBERON:0002619!4.50e-07!22;UBERON:0004175!5.79e-07!25;UBERON:0005156!5.87e-07!59;UBERON:0000990!5.87e-07!59 | |ontology_enrichment_uberon=UBERON:0000007!1.45e-11!2;UBERON:0001017!1.09e-08!82;UBERON:0000995!2.07e-08!21;UBERON:0001049!2.88e-08!57;UBERON:0005068!2.88e-08!57;UBERON:0006241!2.88e-08!57;UBERON:0007135!2.88e-08!57;UBERON:0005743!3.62e-08!86;UBERON:0005795!5.33e-08!22;UBERON:0003975!5.33e-08!22;UBERON:0002240!7.28e-08!3;UBERON:0001950!8.43e-08!20;UBERON:0000073!3.74e-07!94;UBERON:0001016!3.74e-07!94;UBERON:0002619!4.50e-07!22;UBERON:0004175!5.79e-07!25;UBERON:0005156!5.87e-07!59;UBERON:0000990!5.87e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000995;3.50e-18;17!UBERON:0000007;1.17e-17;2!UBERON:0003975;3.21e-17;18!UBERON:0004175;7.02e-15;21!UBERON:0001052;1.12e-09;4!UBERON:0003134;1.37e-09;33!UBERON:0003296;1.63e-09;4!UBERON:0010133;1.63e-09;4!UBERON:0003133;3.28e-08;44!UBERON:0000474;5.29e-08;37!UBERON:0004907;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.07e-17,2;UBERON:0000995,7.18e-15,21;UBERON:0005795,3.13e-14,22;UBERON:0003975,3.13e-14,22;UBERON:0004175,1.28e-12,25;UBERON:0001052,1.12e-09,4;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0003134,9.09e-09,37;UBERON:0000474,9.09e-09,37;UBERON:0004907,5.35e-08,5;UBERON:0003100,5.58e-08,41;UBERON:0003133,6.51e-07,48 | |||
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|short_description=p@chr7:12134329..12134354,- | |short_description=p@chr7:12134329..12134354,- | ||
}} | }} |
Latest revision as of 05:30, 31 July 2015
Short description: | p@chr7:12134329..12134354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:12134329..12134354, - |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.07e-17 | 2 |
uterus | 7.18e-15 | 21 |
embryonic uterus | 3.13e-14 | 22 |
internal female genitalia | 3.13e-14 | 22 |
internal genitalia | 1.28e-12 | 25 |
rectum | 1.12e-09 | 4 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
female reproductive organ | 9.09e-09 | 37 |
female reproductive system | 9.09e-09 | 37 |
lower digestive tract | 5.35e-08 | 5 |
female organism | 5.58e-08 | 41 |
reproductive organ | 6.51e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.77e-45 | 3 |
leiomyoma | 9.77e-45 | 3 |
benign neoplasm | 7.07e-34 | 4 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |