FFCP PHASE1:Hg19::chr7:106415457..106415472,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490162_5end | |association_with_transcript=0bp_to_ENST00000490162_5end | ||
|cluster_id=chr7:106415457..106415472,+ | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_1_at_ENST00000490162_5end | |description=CAGE_peak_1_at_ENST00000490162_5end | ||
|id=chr7:106415457..106415472,+ | |id=chr7:106415457..106415472,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.90e-12!254;CL:0000076!2.78e-08!62;CL:0000223!2.92e-07!59;CL:0000063!6.09e-07!578 | |ontology_enrichment_celltype=CL:0000066!5.90e-12!254;CL:0000076!2.78e-08!62;CL:0000223!2.92e-07!59;CL:0000063!6.09e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.09e-16,253;CL:0000076,4.76e-10,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.29e-22!106;DOID:162!1.00e-20!235;DOID:14566!8.35e-20!239;DOID:0050687!2.52e-18!143;DOID:1749!3.63e-12!14;DOID:299!1.41e-11!25;DOID:1036!2.35e-09!8;DOID:0050686!7.46e-08!137;DOID:170!9.60e-07!6 | |ontology_enrichment_disease=DOID:305!2.29e-22!106;DOID:162!1.00e-20!235;DOID:14566!8.35e-20!239;DOID:0050687!2.52e-18!143;DOID:1749!3.63e-12!14;DOID:299!1.41e-11!25;DOID:1036!2.35e-09!8;DOID:0050686!7.46e-08!137;DOID:170!9.60e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.33e-17;14!DOID:3908;3.67e-09;5!DOID:1036;6.70e-09;8!DOID:299;1.72e-08;25!DOID:170;1.81e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.52e-26,106;DOID:162,1.05e-20,235;DOID:0050687,2.71e-20,143;DOID:14566,5.53e-20,239;DOID:1749,2.09e-17,14;DOID:3908,2.68e-09,5;DOID:1036,6.83e-09,8;DOID:299,1.98e-08,25;DOID:0050686,3.73e-08,137;DOID:170,1.86e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.89e-09!7;UBERON:0001173!2.89e-09!7;UBERON:0004912!2.89e-09!7;UBERON:0005911!2.40e-07!82;UBERON:0000344!7.25e-07!12 | |ontology_enrichment_uberon=UBERON:0002294!2.89e-09!7;UBERON:0001173!2.89e-09!7;UBERON:0004912!2.89e-09!7;UBERON:0005911!2.40e-07!82;UBERON:0000344!7.25e-07!12 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000490162 | |short_description=p1@ENST00000490162 | ||
}} | }} |
Latest revision as of 04:49, 31 July 2015
Short description: | p1@ENST00000490162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000490162_5end |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | 0bp_to_ENST00000490162_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.09e-16 | 253 |
squamous epithelial cell | 4.76e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.52e-26 | 106 |
cancer | 1.05e-20 | 235 |
cell type cancer | 2.71e-20 | 143 |
disease of cellular proliferation | 5.53e-20 | 239 |
squamous cell carcinoma | 2.09e-17 | 14 |
non-small cell lung carcinoma | 2.68e-09 | 5 |
chronic leukemia | 6.83e-09 | 8 |
adenocarcinoma | 1.98e-08 | 25 |
organ system cancer | 3.73e-08 | 137 |
endocrine gland cancer | 1.86e-07 | 6 |