FFCP PHASE1:Hg19::chr7:100201073..100201087,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-415bp_to_ENST00000544873_5end | |association_with_transcript=-415bp_to_ENST00000544873_5end | ||
|cluster_id=chr7:100201073..100201087,- | |||
|coexpression_cluster_id=C1641 | |coexpression_cluster_id=C1641 | ||
|description=CAGE_peak_2_at_ENST00000544873_5end | |description=CAGE_peak_2_at_ENST00000544873_5end | ||
|id=chr7:100201073..100201087,- | |id=chr7:100201073..100201087,- | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-35!180;CL:0000057!5.88e-24!75;CL:0000048!1.17e-14!430;CL:0000723!7.33e-14!436;CL:0000183!7.85e-14!59;CL:0000187!8.23e-14!54;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000034!3.32e-13!444;CL:0000393!6.14e-12!60;CL:0000211!6.14e-12!60;CL:0002620!6.87e-11!23;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000499!3.50e-09!27;CL:0002371!4.55e-09!591;CL:0002320!1.25e-08!365;CL:0000327!1.20e-07!14;CL:0002334!5.77e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.02e-35!180;CL:0000057!5.88e-24!75;CL:0000048!1.17e-14!430;CL:0000723!7.33e-14!436;CL:0000183!7.85e-14!59;CL:0000187!8.23e-14!54;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000034!3.32e-13!444;CL:0000393!6.14e-12!60;CL:0000211!6.14e-12!60;CL:0002620!6.87e-11!23;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000499!3.50e-09!27;CL:0002371!4.55e-09!591;CL:0002320!1.25e-08!365;CL:0000327!1.20e-07!14;CL:0002334!5.77e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000153;9.86e-15;9!CL:0000447;9.86e-15;9!CL:0000499;6.48e-14;28!CL:0000327;9.78e-11;15!CL:0000135;1.26e-09;3!CL:0000388;1.26e-09;3!CL:0000214;2.30e-09;3!CL:0000138;9.79e-08;6!CL:0002334;1.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.49e-16,76;CL:0000153,1.23e-14,9;CL:0000447,1.23e-14,9;CL:0000499,4.14e-14,28;CL:0002320,7.75e-13,361;CL:0000048,4.86e-11,427;CL:0000723,1.11e-10,433;CL:0000327,1.13e-10,15;CL:0000034,3.24e-10,441;CL:0000135,1.14e-09,3;CL:0000388,1.14e-09,3;CL:0000214,2.64e-09,3;CL:0000134,3.52e-09,354;CL:0000219,8.18e-08,386;CL:0000058,1.08e-07,6;CL:0000138,1.08e-07,6;CL:0002334,2.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0004290!8.67e-14!70;UBERON:0002385!2.67e-13!63;UBERON:0001015!2.67e-13!63;UBERON:0000383!2.67e-13!63;UBERON:0001134!1.20e-12!61;UBERON:0002036!1.20e-12!61;UBERON:0003082!1.20e-12!61;UBERON:0000486!1.52e-12!82;UBERON:0002384!2.03e-09!375;UBERON:0005256!4.55e-09!143;UBERON:0002199!2.69e-07!45;UBERON:0002416!2.69e-07!45;UBERON:0000479!6.78e-07!787 | |ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0004290!8.67e-14!70;UBERON:0002385!2.67e-13!63;UBERON:0001015!2.67e-13!63;UBERON:0000383!2.67e-13!63;UBERON:0001134!1.20e-12!61;UBERON:0002036!1.20e-12!61;UBERON:0003082!1.20e-12!61;UBERON:0000486!1.52e-12!82;UBERON:0002384!2.03e-09!375;UBERON:0005256!4.55e-09!143;UBERON:0002199!2.69e-07!45;UBERON:0002416!2.69e-07!45;UBERON:0000479!6.78e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.11e-16;8!UBERON:0000982;3.11e-16;8!UBERON:0004770;3.11e-16;8!UBERON:0001013;5.03e-11;14!UBERON:0000075;5.91e-10;16!UBERON:0007846;1.26e-09;3!UBERON:0000043;1.26e-09;3!UBERON:0007845;1.26e-09;3!UBERON:0006915;2.30e-09;3!UBERON:0007616;2.30e-09;3!UBERON:0002217;2.30e-09;3!UBERON:0002018;2.30e-09;3!UBERON:0001434;2.38e-09;36!UBERON:0011135;7.45e-09;5!UBERON:0002216;7.45e-09;5!UBERON:0011134;7.45e-09;5!UBERON:0002209;7.45e-09;5!UBERON:0002213;7.45e-09;5!UBERON:0007844;7.45e-09;5!UBERON:0011138;7.45e-09;5!UBERON:0001130;7.45e-09;5!UBERON:0001066;7.45e-09;5!UBERON:0001468;7.45e-09;5!UBERON:0002072;8.36e-09;5!UBERON:0002384;5.09e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.89e-16,8;UBERON:0000982,3.89e-16,8;UBERON:0004770,3.89e-16,8;UBERON:0002384,4.17e-12,371;UBERON:0001013,2.65e-11,14;UBERON:0000075,5.33e-10,16;UBERON:0007846,1.14e-09,3;UBERON:0000043,1.14e-09,3;UBERON:0007845,1.14e-09,3;UBERON:0006915,2.64e-09,3;UBERON:0007616,2.64e-09,3;UBERON:0002217,2.64e-09,3;UBERON:0002018,2.64e-09,3;UBERON:0002072,7.55e-09,5;UBERON:0011135,8.21e-09,5;UBERON:0002216,8.21e-09,5;UBERON:0011134,8.21e-09,5;UBERON:0002209,8.21e-09,5;UBERON:0002213,8.21e-09,5;UBERON:0005856,8.21e-09,5;UBERON:0005866,8.21e-09,5;UBERON:0005863,8.21e-09,5;UBERON:0007844,8.21e-09,5;UBERON:0011138,8.21e-09,5;UBERON:0001130,8.21e-09,5;UBERON:0001066,8.21e-09,5;UBERON:0001468,8.21e-09,5;UBERON:0002199,4.13e-07,46;UBERON:0002416,4.13e-07,46;UBERON:0003102,6.93e-07,99;UBERON:0011137,8.15e-07,14 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,1.74467704820074,0,1.89515962028049,1.30592814099919,0.245733936501509,0,0,0.263766978228454,1.48519623552056,1.65698687863958,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,2.53007406669196,2.50668955317945,2.31754430337318,0,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.529636723252875,2.0078563452417,1.41867352879343,0,0,0.49333509683432,0.622422070799533,0,0.163461903113459,0.605429710579726,3.45705554687999,0.70296429550139,1.5608003841516,0,1.19558944441441,0.352303495931295,0.161872944368132,0,0,0.737005903870608,0.206651562351531,1.18800285728205,1.7308685049499,0,0.718618141816238,0,0,0,1.75591048352335,3.0648779579902,3.45547535485173,0.226864366320042,0.89694817844431,0.85422955527427,0.847727604638247,2.70081986475962,0.309157587715317,0,0.930584281657949,2.86919764810153,0.292311015483596,2.01947019395292,0.920498986422993,0.323292113637624,1.77504796258307,0.201504196455281,0.339121184620975,0,0,0,0,0.132529768321485,0,0,0,0,0,3.21620469096443,0,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.258543431515556,7.15312891703765,0,1.06375246633948,1.04007436911366,1.54324424557285,1.41849132023278,0.799266537048298,0.285955987316295,1.62786481617433,0,1.62868092146868,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,4.50153468953709,1.08506009479894,0.623912584592421,0.356857977594324,0.157702415033935,1.99140405487612,0,2.27407504055985,3.10419213877515,1.99267679560631,0.368738337083406,1.99832313276591,1.56640925970192,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0.460385919864187,1.40330047216537,0.256278298511402,0,0,1.48418066444991,1.3878872442239,3.19611105563629,0.739144404124282,1.03850885836724,2.5566283261191,0,0,0,0.803701137152247,0.546273504020151,1.96686622439136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0.773365746336976,0.308097234229289,0.921022048356777,0.137836572484531,0.322260734604821,0.725083469571143,0.340906509664404,1.15741646340759,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.143124886741991,1.116475108079,0.316379424718726,0,1.02359116524534,0.855877976067841,1.90921948755562,0,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0.9554993798559,1.69686518344455,0,0,0,0,0.578775534266688,1.9676842561399,0,0.30982349809975,0.563391205064483,0.143411352204052,0.88424136911809,0.35667105148125,1.06428319221179,4.64436797654861,3.62224382255892,0.75894634753143,1.04980416073495,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0.384751292518985,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.339936274560377,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.233713309847224,0,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0.756154618816195,0.777186002913902,0.443565449968902,0.318593534327405,0,0.155262956876259,0.829412415681711,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0,0.464033759878494,1.59238355479446,0,3.09056134664514,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0.127894371303652,0,0,0,1.3578602396322,0.212574920101683,0,0,0,0,0,7.05351887381368,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0.8692913615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| ||
|short_description=p2@ENST00000544873 | |short_description=p2@ENST00000544873 | ||
}} | }} |
Latest revision as of 04:04, 31 July 2015
Short description: | p2@ENST00000544873 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000544873_5end |
Coexpression cluster: | C1641_Mesenchymal_Nucleus_Fibroblast_tenocyte_Pericytes_normal_Smooth |
Association with transcript: | -415bp_to_ENST00000544873_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.49e-16 | 76 |
GAG secreting cell | 1.23e-14 | 9 |
carbohydrate secreting cell | 1.23e-14 | 9 |
stromal cell | 4.14e-14 | 28 |
connective tissue cell | 7.75e-13 | 361 |
multi fate stem cell | 4.86e-11 | 427 |
somatic stem cell | 1.11e-10 | 433 |
extracellular matrix secreting cell | 1.13e-10 | 15 |
stem cell | 3.24e-10 | 441 |
fibrocyte | 1.14e-09 | 3 |
tendon cell | 1.14e-09 | 3 |
synovial cell | 2.64e-09 | 3 |
mesenchymal cell | 3.52e-09 | 354 |
motile cell | 8.18e-08 | 386 |
chondroblast | 1.08e-07 | 6 |
chondrocyte | 1.08e-07 | 6 |
preadipocyte | 2.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.89e-16 | 8 |
skeletal joint | 3.89e-16 | 8 |
articular system | 3.89e-16 | 8 |
connective tissue | 4.17e-12 | 371 |
adipose tissue | 2.65e-11 | 14 |
subdivision of skeletal system | 5.33e-10 | 16 |
dense regular connective tissue | 1.14e-09 | 3 |
tendon | 1.14e-09 | 3 |
regular connective tissue | 1.14e-09 | 3 |
stratified squamous epithelium | 2.64e-09 | 3 |
layer of synovial tissue | 2.64e-09 | 3 |
synovial joint | 2.64e-09 | 3 |
synovial membrane of synovial joint | 2.64e-09 | 3 |
hypodermis | 7.55e-09 | 5 |
intervertebral cartilage | 8.21e-09 | 5 |
symphysis | 8.21e-09 | 5 |
nonsynovial joint | 8.21e-09 | 5 |
fibrous joint | 8.21e-09 | 5 |
cartilaginous joint | 8.21e-09 | 5 |
developing mesenchymal condensation | 8.21e-09 | 5 |
pre-cartilage condensation | 8.21e-09 | 5 |
cartilaginous condensation | 8.21e-09 | 5 |
cartilage element | 8.21e-09 | 5 |
post-cranial axial skeletal system | 8.21e-09 | 5 |
vertebral column | 8.21e-09 | 5 |
intervertebral disk | 8.21e-09 | 5 |
intervertebral joint | 8.21e-09 | 5 |
integument | 4.13e-07 | 46 |
integumental system | 4.13e-07 | 46 |
surface structure | 6.93e-07 | 99 |
axial skeletal system | 8.15e-07 | 14 |