FFCP PHASE1:Hg19::chr6:4773312..4773315,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9425 | |EntrezGene=9425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1811 | |HGNC=1811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000483019_5end | |association_with_transcript=37bp_to_ENST00000483019_5end | ||
|cluster_id=chr6:4773312..4773315,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_13_at_CDYL_5end | |description=CAGE_peak_13_at_CDYL_5end | ||
|id=chr6:4773312..4773315,+ | |id=chr6:4773312..4773315,+ | ||
|ontology_enrichment_celltype=CL:0002322!8.24e-67!5;CL:0000540!1.52e-20!6;CL:0000031!1.52e-20!6;CL:0000404!1.52e-20!6;CL:0000039!2.31e-17!7;CL:0000586!2.31e-17!7;CL:0000047!1.41e-15!8;CL:0000148!1.13e-12!10;CL:0000541!1.13e-12!10;CL:0000147!3.25e-09!14;CL:0001014!9.19e-08!2;CL:0001016!9.19e-08!2;CL:0000133!1.43e-07!59 | |ontology_enrichment_celltype=CL:0002322!8.24e-67!5;CL:0000540!1.52e-20!6;CL:0000031!1.52e-20!6;CL:0000404!1.52e-20!6;CL:0000039!2.31e-17!7;CL:0000586!2.31e-17!7;CL:0000047!1.41e-15!8;CL:0000148!1.13e-12!10;CL:0000541!1.13e-12!10;CL:0000147!3.25e-09!14;CL:0001014!9.19e-08!2;CL:0001016!9.19e-08!2;CL:0000133!1.43e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.12e-89;5!CL:0002321;3.81e-30;15!CL:0000148;8.12e-17;10!CL:0000540;5.26e-13;6!CL:0000404;5.26e-13;6!CL:0000147;3.31e-12;14!CL:0000710;1.00e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.48e-90,5;CL:0000148,6.90e-17,10;CL:0000541,6.90e-17,10;CL:0000540,4.81e-13,6;CL:0000031,4.81e-13,6;CL:0000404,4.81e-13,6;CL:0000147,2.95e-12,14;CL:0000047,5.06e-10,8;CL:0000710,9.23e-09,20;CL:0000133,1.76e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;5.26e-13;6!UBERON:0009117;4.18e-08;10!UBERON:0005564;4.18e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!7.46e-15!22;DOID:2994!7.46e-15!22 | |ontology_enrichment_disease=DOID:3095!7.46e-15!22;DOID:2994!7.46e-15!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;6.15e-08;22!DOID:2994;6.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.85e-08,22;DOID:2994,6.85e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.82e-15!8;UBERON:0003135!2.80e-11!11;UBERON:0000991!3.13e-10!21;UBERON:0009196!3.13e-10!21;UBERON:0009117!3.13e-10!21;UBERON:0005564!3.13e-10!21;UBERON:0004176!8.90e-10!22 | |ontology_enrichment_uberon=UBERON:0000473!2.82e-15!8;UBERON:0003135!2.80e-11!11;UBERON:0000991!3.13e-10!21;UBERON:0009196!3.13e-10!21;UBERON:0009117!3.13e-10!21;UBERON:0005564!3.13e-10!21;UBERON:0004176!8.90e-10!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.30e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,3.97589304964456,1.51052125730374,1.34759371519982,2.77552935963191,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,2.06309154895851,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13549782351571,1.20192129160065,0,0.509944148709909,0,1.19463369395298,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,3.97589304964456,1.51052125730374,1.34759371519982,2.77552935963191,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,2.06309154895851,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13549782351571,1.20192129160065,0,0.509944148709909,0,1.19463369395298,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@CDYL | |short_description=p13@CDYL | ||
}} | }} |
Latest revision as of 04:12, 19 September 2015
Short description: | p13@CDYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CDYL_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 37bp_to_ENST00000483019_5end |
EntrezGene: | CDYL |
HGNC: | 1811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.48e-90 | 5 |
melanocyte | 6.90e-17 | 10 |
melanoblast | 6.90e-17 | 10 |
neuron | 4.81e-13 | 6 |
neuroblast | 4.81e-13 | 6 |
electrically signaling cell | 4.81e-13 | 6 |
pigment cell | 2.95e-12 | 14 |
neuronal stem cell | 5.06e-10 | 8 |
neurecto-epithelial cell | 9.23e-09 | 20 |
neurectodermal cell | 1.76e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.85e-08 | 22 |
germ cell cancer | 6.85e-08 | 22 |