FFCP PHASE1:Hg19::chr6:20321349..20321358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:20321349..20321358,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr6:20321349..20321358,+ | |description=CAGE_peak_at_chr6:20321349..20321358,+ | ||
|id=chr6:20321349..20321358,+ | |id=chr6:20321349..20321358,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.41e-11;10!UBERON:0005564;5.41e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.68e-11!2;UBERON:0002757!3.68e-11!2;UBERON:0010134!3.68e-11!2;UBERON:0002784!3.68e-11!2;UBERON:0005408!3.68e-11!2;UBERON:0001899!3.68e-11!2 | |ontology_enrichment_uberon=UBERON:0001905!3.68e-11!2;UBERON:0002757!3.68e-11!2;UBERON:0010134!3.68e-11!2;UBERON:0002784!3.68e-11!2;UBERON:0005408!3.68e-11!2;UBERON:0001899!3.68e-11!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.00e-13;2!UBERON:0002757;1.00e-13;2!UBERON:0010134;1.00e-13;2!UBERON:0005408;1.00e-13;2!UBERON:0001899;1.00e-13;2!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000473;1.71e-13;8!UBERON:0003135;4.42e-10;11!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0003296;1.64e-07;4!UBERON:0010133;1.64e-07;4!UBERON:0002784;1.64e-07;4!UBERON:0009856;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.07e-13,2;UBERON:0002757,1.07e-13,2;UBERON:0010134,1.07e-13,2;UBERON:0005408,1.07e-13,2;UBERON:0001899,1.07e-13,2;UBERON:0004903,1.37e-13,2;UBERON:0002173,1.37e-13,2;UBERON:0002186,1.37e-13,2;UBERON:0000473,1.71e-13,8;UBERON:0003135,4.42e-10,11;UBERON:0004821,1.67e-09,3;UBERON:0003215,1.67e-09,3;UBERON:0010368,1.67e-09,3;UBERON:0009911,1.67e-09,3;UBERON:0002299,1.67e-09,3;UBERON:0006524,1.67e-09,3;UBERON:0008874,1.67e-09,3;UBERON:0002169,1.67e-09,3;UBERON:0004894,1.67e-09,3;UBERON:0003296,1.69e-07,4;UBERON:0010133,1.69e-07,4;UBERON:0002784,1.69e-07,4 | |||
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|short_description=p@chr6:20321349..20321358,+ | |short_description=p@chr6:20321349..20321358,+ | ||
}} | }} |
Latest revision as of 22:34, 30 July 2015
Short description: | p@chr6:20321349..20321358, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:20321349..20321358, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.07e-13 | 2 |
regional part of epithalamus | 1.07e-13 | 2 |
secretory circumventricular organ | 1.07e-13 | 2 |
circumventricular organ | 1.07e-13 | 2 |
epithalamus | 1.07e-13 | 2 |
bronchoalveolar duct junction | 1.37e-13 | 2 |
alveolar duct | 1.37e-13 | 2 |
bronchiole | 1.37e-13 | 2 |
testis | 1.71e-13 | 8 |
male reproductive organ | 4.42e-10 | 11 |
pulmonary alveolus epithelium | 1.67e-09 | 3 |
alveolus | 1.67e-09 | 3 |
pulmonary lobule | 1.67e-09 | 3 |
lobule | 1.67e-09 | 3 |
alveolus of lung | 1.67e-09 | 3 |
alveolar system | 1.67e-09 | 3 |
pulmonary acinus | 1.67e-09 | 3 |
alveolar sac | 1.67e-09 | 3 |
alveolar wall | 1.67e-09 | 3 |
gland of diencephalon | 1.69e-07 | 4 |
neuroendocrine gland | 1.69e-07 | 4 |
regional part of diencephalon | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.37e-13 | 2 |