FFCP PHASE1:Hg19::chr5:169816646..169816665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3779 | |EntrezGene=3779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6285 | |HGNC=6285 | ||
|TSSclassifier=strong | |||
|UniProt=Q16558 | |UniProt=Q16558 | ||
|association_with_transcript=-8bp_to_ENST00000521859,NM_004137,uc003maq.1,uc003mar.2_5end | |association_with_transcript=-8bp_to_ENST00000521859,NM_004137,uc003maq.1,uc003mar.2_5end | ||
|cluster_id=chr5:169816646..169816665,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_2_at_KCNMB1_5end | |description=CAGE_peak_2_at_KCNMB1_5end | ||
|id=chr5:169816646..169816665,- | |id=chr5:169816646..169816665,- | ||
|ontology_enrichment_celltype=CL:0002194!4.19e-47!63;CL:0000576!4.19e-47!63;CL:0000040!4.19e-47!63;CL:0000559!4.19e-47!63;CL:0002009!9.15e-47!65;CL:0002057!2.93e-44!42;CL:0000557!1.56e-42!71;CL:0000860!5.51e-40!45;CL:0000839!5.79e-40!70;CL:0000766!8.37e-40!76;CL:0000763!5.16e-35!112;CL:0000049!5.16e-35!112;CL:0002087!4.20e-29!119;CL:0000738!7.29e-28!140;CL:0000037!2.76e-26!172;CL:0000566!2.76e-26!172;CL:0002032!4.77e-25!165;CL:0000837!4.77e-25!165;CL:0002031!1.16e-24!124;CL:0000988!1.06e-23!182;CL:0002393!9.38e-10!9;CL:0002397!9.38e-10!9 | |ontology_enrichment_celltype=CL:0002194!4.19e-47!63;CL:0000576!4.19e-47!63;CL:0000040!4.19e-47!63;CL:0000559!4.19e-47!63;CL:0002009!9.15e-47!65;CL:0002057!2.93e-44!42;CL:0000557!1.56e-42!71;CL:0000860!5.51e-40!45;CL:0000839!5.79e-40!70;CL:0000766!8.37e-40!76;CL:0000763!5.16e-35!112;CL:0000049!5.16e-35!112;CL:0002087!4.20e-29!119;CL:0000738!7.29e-28!140;CL:0000037!2.76e-26!172;CL:0000566!2.76e-26!172;CL:0002032!4.77e-25!165;CL:0000837!4.77e-25!165;CL:0002031!1.16e-24!124;CL:0000988!1.06e-23!182;CL:0002393!9.38e-10!9;CL:0002397!9.38e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-54;33!CL:0002057;2.65e-54;33!CL:0000473;1.59e-52;39!CL:0000234;1.59e-52;39!CL:0000576;3.11e-48;48!CL:0000766;2.08e-34;69!CL:0000763;2.81e-16;100!CL:0002087;2.12e-11;104!CL:0002393;4.27e-11;6!CL:0002397;4.27e-11;6!CL:0000738;1.30e-10;136!CL:0000235;5.09e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.21e-83,59;CL:0000576,1.21e-83,59;CL:0000040,1.21e-83,59;CL:0000559,1.21e-83,59;CL:0002009,2.68e-83,61;CL:0000473,3.34e-83,48;CL:0000234,3.34e-83,48;CL:0000557,3.42e-77,67;CL:0000860,2.70e-74,42;CL:0002057,2.70e-74,42;CL:0000766,2.34e-73,72;CL:0000839,5.91e-73,66;CL:0000763,3.11e-58,108;CL:0000049,3.11e-58,108;CL:0000738,7.61e-42,136;CL:0002087,1.58e-40,115;CL:0000037,4.15e-35,168;CL:0002031,4.73e-35,120;CL:0002032,1.27e-33,161;CL:0000837,1.27e-33,161;CL:0000988,2.86e-32,177;CL:0002393,1.88e-15,9;CL:0002397,1.88e-15,9;CL:0000235,5.73e-10,6;CL:0000134,1.27e-07,354;CL:0002320,3.74e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.99e-53;42!CL:0000049;4.46e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.84e-40!102;UBERON:0003061!4.84e-40!102;UBERON:0002193!7.50e-37!112;UBERON:0002371!2.88e-36!80;UBERON:0001474!3.88e-33!86;UBERON:0007023!1.33e-31!115;UBERON:0004765!1.92e-27!101;UBERON:0001434!1.92e-27!101;UBERON:0002405!3.73e-25!115;UBERON:0003081!9.33e-15!216;UBERON:0002204!2.04e-10!167;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0000062!1.35e-07!511 | |ontology_enrichment_uberon=UBERON:0002390!4.84e-40!102;UBERON:0003061!4.84e-40!102;UBERON:0002193!7.50e-37!112;UBERON:0002371!2.88e-36!80;UBERON:0001474!3.88e-33!86;UBERON:0007023!1.33e-31!115;UBERON:0004765!1.92e-27!101;UBERON:0001434!1.92e-27!101;UBERON:0002405!3.73e-25!115;UBERON:0003081!9.33e-15!216;UBERON:0002204!2.04e-10!167;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0000062!1.35e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.11e-66,76;UBERON:0001474,8.36e-60,82;UBERON:0002390,1.43e-58,98;UBERON:0003061,1.43e-58,98;UBERON:0004765,6.81e-53,90;UBERON:0002193,2.38e-51,108;UBERON:0002405,1.31e-50,93;UBERON:0001434,8.22e-46,100;UBERON:0003081,1.70e-29,203;UBERON:0002204,1.75e-21,167;UBERON:0000926,1.18e-17,315;UBERON:0004120,1.18e-17,315;UBERON:0006603,1.18e-17,315;UBERON:0002050,4.80e-10,564;UBERON:0000923,8.45e-10,560;UBERON:0010316,8.45e-10,560;UBERON:0005291,8.45e-10,560;UBERON:0006598,8.45e-10,560;UBERON:0010317,8.45e-10,560;UBERON:0002532,8.45e-10,560;UBERON:0005423,5.47e-09,581;UBERON:0000922,2.43e-08,592;UBERON:0007023,2.45e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,3.54027849164014,3.0706351847777,2.78669021968937,0,0,0,0,0,0.587200878669695,9.97191735357379,12.2332112956786,8.89744569934992,1.56740831967947,1.6194683300949,0,19.9195587128004,19.2716731281293,23.773237996406,15.3403164357752,17.2690512969167,21.3697395917621,27.6184696629264,24.8475885333228,20.3374717704183,21.718977886407,25.1739026597692,16.251178391321,19.9536879915161,14.4640259530658,12.3597916444797,32.1388086989448,27.278967301468,21.0981251513684,15.5030111087757,21.143147707893,22.5899117782328,40.3390841693732,31.7735725827038,30.5182902007832,21.6073852120799,21.9022825736485,23.2392063834475,24.2159801053348,37.196041234744,29.1145396445614,8.23895616616573,7.22854619881148,5.87044207423452,4.94245977044578,5.85689882081875,7.87555374815693,3.99017841237748,5.76858363877361,4.74926799788048,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,1.68152568894461,1.05353633910031,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.752875595388864,0.639933055772092,1.24930726552346,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,1.57174890597255,0,0,0,1.21890816109487,2.52620124985844,0.953962497221368,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.919463387397059,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,3.69325509131096,2.80805118167085,5.20209068010549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,4.01805673145701,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,1.03384013061444,6.25571182373989,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0,1.08006287447623,0,0,0.962479855263359,0,0,0,0,0,0,0.383010740264733,0,0,0,1.82587743226554,0,0,0,0.1605880751037,0.403599414382095,0.851692475380653,9.27464430840565,4.91585222893533,5.36822658941798,4.33807768450962,2.14926904942244,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,9.76315142430242,0.276283915531148,0,0.511343412510774,0.615424027305347,0.622079175323615,0,0,0.511572370226872,1.67693789582787,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0,0,0,0.552896299656123,0.591095237907095,0,0,0.139423744278603,2.92410982314429,0,0,0,0,0,0,0.533034776018635,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,4.97630965539252,1.32686346755009,3.05515072466813,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,1.97292201424695,3.62972148145992,0,2.27471686662557,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,2.23074737923365,0,0.90392296312213,0,0,0.316553979779393,0.391102765469606,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,3.83239764200917,0,0,2.51354161145029,6.64565229633883,2.87149209830726,0.199679000498991,0,0.446342914883745,2.21705459206197,0,0,0,0,0,0,0.0846733320657845,0,0.681017030557878,0,0,0,2.0247650239635,0,0.485996453264197,0,0.551639951094387,0.314727528809989,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.05786081394152,0,0,1.28144895081234,2.04365596629566,0.828478110694391,0.992332043623902,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.998361463831671,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,8.83294287600557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,13.6402216187572,8.90194430099533,8.17826971279221,1.31043939538565,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.676892955143315,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,0,1.09651553371436,4.46590060550365,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0.443511850813194,0,0,0.543757863814654,0.131545547125698,0,0,3.76766845682467,0,0,4.56579360254748,0,0,1.35805433935647,0,0,0,0,0,0,0,2.15113679410139,0,0,3.81048345171836,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,1.5299169235277,0,4.16752146981639,0,2.159393138264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| ||
|short_description=p2@KCNMB1 | |short_description=p2@KCNMB1 | ||
}} | }} |
Latest revision as of 22:11, 16 September 2015
Short description: | p2@KCNMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNMB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -8bp_to_ENST00000521859, NM_004137, uc003maq.1, uc003mar.2_5end |
EntrezGene: | KCNMB1 |
HGNC: | 6285 |
UniProt: | Q16558 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.21e-83 | 59 |
monocyte | 1.21e-83 | 59 |
monoblast | 1.21e-83 | 59 |
promonocyte | 1.21e-83 | 59 |
macrophage dendritic cell progenitor | 2.68e-83 | 61 |
defensive cell | 3.34e-83 | 48 |
phagocyte | 3.34e-83 | 48 |
granulocyte monocyte progenitor cell | 3.42e-77 | 67 |
classical monocyte | 2.70e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-74 | 42 |
myeloid leukocyte | 2.34e-73 | 72 |
myeloid lineage restricted progenitor cell | 5.91e-73 | 66 |
myeloid cell | 3.11e-58 | 108 |
common myeloid progenitor | 3.11e-58 | 108 |
leukocyte | 7.61e-42 | 136 |
nongranular leukocyte | 1.58e-40 | 115 |
hematopoietic stem cell | 4.15e-35 | 168 |
hematopoietic lineage restricted progenitor cell | 4.73e-35 | 120 |
hematopoietic oligopotent progenitor cell | 1.27e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-33 | 161 |
hematopoietic cell | 2.86e-32 | 177 |
intermediate monocyte | 1.88e-15 | 9 |
CD14-positive, CD16-positive monocyte | 1.88e-15 | 9 |
macrophage | 5.73e-10 | 6 |
mesenchymal cell | 1.27e-07 | 354 |
connective tissue cell | 3.74e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.11e-66 | 76 |
bone element | 8.36e-60 | 82 |
hematopoietic system | 1.43e-58 | 98 |
blood island | 1.43e-58 | 98 |
skeletal element | 6.81e-53 | 90 |
hemolymphoid system | 2.38e-51 | 108 |
immune system | 1.31e-50 | 93 |
skeletal system | 8.22e-46 | 100 |
lateral plate mesoderm | 1.70e-29 | 203 |
musculoskeletal system | 1.75e-21 | 167 |
mesoderm | 1.18e-17 | 315 |
mesoderm-derived structure | 1.18e-17 | 315 |
presumptive mesoderm | 1.18e-17 | 315 |
embryonic structure | 4.80e-10 | 564 |
germ layer | 8.45e-10 | 560 |
germ layer / neural crest | 8.45e-10 | 560 |
embryonic tissue | 8.45e-10 | 560 |
presumptive structure | 8.45e-10 | 560 |
germ layer / neural crest derived structure | 8.45e-10 | 560 |
epiblast (generic) | 8.45e-10 | 560 |
developing anatomical structure | 5.47e-09 | 581 |
embryo | 2.43e-08 | 592 |
adult organism | 2.45e-07 | 114 |