FFCP PHASE1:Hg19::chr5:168504845..168504850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:168504845..168504850,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr5:168504845..168504850,- | |description=CAGE_peak_at_chr5:168504845..168504850,- | ||
|id=chr5:168504845..168504850,- | |id=chr5:168504845..168504850,- | ||
|ontology_enrichment_celltype=CL:1000306!1.66e-07!4;CL:0002547!1.66e-07!4 | |ontology_enrichment_celltype=CL:1000306!1.66e-07!4;CL:0002547!1.66e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002591;4.22e-21;1!CL:0002573;6.34e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.72e-21,1;CL:0002573,6.34e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.34e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;3.02e-11;2!DOID:962;3.02e-11;2!DOID:1192;6.34e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.02e-11,2;DOID:962,3.02e-11,2;DOID:1192,6.34e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-15!115;UBERON:0003075!7.25e-10!86;UBERON:0007284!7.25e-10!86;UBERON:0002791!1.19e-09!33;UBERON:0002616!1.27e-09!59;UBERON:0002020!1.89e-09!34;UBERON:0003528!1.89e-09!34;UBERON:0001893!2.98e-09!34;UBERON:0002346!4.39e-09!90;UBERON:0001049!4.48e-09!57;UBERON:0005068!4.48e-09!57;UBERON:0006241!4.48e-09!57;UBERON:0007135!4.48e-09!57;UBERON:0000955!7.29e-09!69;UBERON:0006238!7.29e-09!69;UBERON:0000073!7.79e-09!94;UBERON:0001016!7.79e-09!94;UBERON:0002780!3.86e-08!41;UBERON:0001890!3.86e-08!41;UBERON:0006240!3.86e-08!41;UBERON:0000153!4.35e-08!129;UBERON:0007811!4.35e-08!129;UBERON:0001017!6.61e-08!82;UBERON:0005743!6.80e-08!86;UBERON:0003080!7.55e-08!42;UBERON:0001869!9.78e-08!32;UBERON:0000415!1.66e-07!4;UBERON:0007240!1.66e-07!4;UBERON:0005742!1.66e-07!4;UBERON:0005734!1.66e-07!4;UBERON:0004664!1.66e-07!4;UBERON:0004663!1.66e-07!4;UBERON:0000033!1.66e-07!123;UBERON:0004121!4.60e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!1.95e-15!115;UBERON:0003075!7.25e-10!86;UBERON:0007284!7.25e-10!86;UBERON:0002791!1.19e-09!33;UBERON:0002616!1.27e-09!59;UBERON:0002020!1.89e-09!34;UBERON:0003528!1.89e-09!34;UBERON:0001893!2.98e-09!34;UBERON:0002346!4.39e-09!90;UBERON:0001049!4.48e-09!57;UBERON:0005068!4.48e-09!57;UBERON:0006241!4.48e-09!57;UBERON:0007135!4.48e-09!57;UBERON:0000955!7.29e-09!69;UBERON:0006238!7.29e-09!69;UBERON:0000073!7.79e-09!94;UBERON:0001016!7.79e-09!94;UBERON:0002780!3.86e-08!41;UBERON:0001890!3.86e-08!41;UBERON:0006240!3.86e-08!41;UBERON:0000153!4.35e-08!129;UBERON:0007811!4.35e-08!129;UBERON:0001017!6.61e-08!82;UBERON:0005743!6.80e-08!86;UBERON:0003080!7.55e-08!42;UBERON:0001869!9.78e-08!32;UBERON:0000415!1.66e-07!4;UBERON:0007240!1.66e-07!4;UBERON:0005742!1.66e-07!4;UBERON:0005734!1.66e-07!4;UBERON:0004664!1.66e-07!4;UBERON:0004663!1.66e-07!4;UBERON:0000033!1.66e-07!123;UBERON:0004121!4.60e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.22e-21;1!UBERON:0002426;4.22e-21;1!UBERON:0003831;4.22e-21;1!UBERON:0003898;4.22e-21;1!UBERON:0004830;4.22e-21;1!UBERON:0003830;4.22e-21;1!UBERON:0005175;4.22e-21;1!UBERON:0001774;4.22e-21;1!UBERON:0001103;4.22e-21;1!UBERON:0000341;3.02e-11;2!UBERON:0001954;3.02e-11;2!UBERON:0005090;3.02e-11;2!UBERON:0001630;3.02e-11;2!UBERON:0000078;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002012;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0008886;3.02e-11;2!UBERON:0002114;6.34e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.88e-21,1;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0000341,2.23e-11,2;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0001954,2.73e-11,2;UBERON:0003022,2.73e-11,2;UBERON:0002421,2.73e-11,2;UBERON:0002600,2.73e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0009722,4.34e-08,11;UBERON:0007690,4.34e-08,11;UBERON:0004145,7.76e-08,3;UBERON:0002114,8.29e-08,2 | |||
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| ||
|short_description=p@chr5:168504845..168504850,- | |short_description=p@chr5:168504845..168504850,- | ||
}} | }} |
Latest revision as of 12:48, 30 July 2015
Short description: | p@chr5:168504845..168504850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:168504845..168504850, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
Schwann cell | 6.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 1.88e-21 | 1 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
throat | 2.23e-11 | 2 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
Ammon's horn | 2.73e-11 | 2 |
lobe parts of cerebral cortex | 2.73e-11 | 2 |
hippocampal formation | 2.73e-11 | 2 |
limbic lobe | 2.73e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
entire pharyngeal arch endoderm | 4.34e-08 | 11 |
early pharyngeal endoderm | 4.34e-08 | 11 |
outflow tract | 7.76e-08 | 3 |
duodenum | 8.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.02e-11 | 2 |
neurofibroma | 3.02e-11 | 2 |
peripheral nervous system neoplasm | 6.34e-08 | 3 |