FFCP PHASE1:Hg19::chr5:147582412..147582423,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404203 | |EntrezGene=404203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |HGNC=29486 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWN8 | |UniProt=Q6UWN8 | ||
|association_with_transcript=8bp_to_ENST00000325630,uc003lpa.2_5end | |association_with_transcript=8bp_to_ENST00000325630,uc003lpa.2_5end | ||
|cluster_id=chr5:147582412..147582423,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_9_at_SPINK6_5end | |description=CAGE_peak_9_at_SPINK6_5end | ||
|id=chr5:147582412..147582423,+ | |id=chr5:147582412..147582423,+ | ||
|ontology_enrichment_celltype=CL:0002159!3.43e-22!13;CL:0000575!1.94e-13!2;CL:0000317!2.64e-13!2;CL:1000448!2.64e-13!2;CL:0002308!2.64e-13!2;CL:0002140!2.64e-13!2;CL:0000362!1.79e-12!8;CL:0000622!1.67e-11!5;CL:0000154!1.14e-09!6;CL:0002573!7.30e-09!2;CL:0002077!3.16e-08!33;CL:0000066!3.74e-08!254 | |ontology_enrichment_celltype=CL:0002159!3.43e-22!13;CL:0000575!1.94e-13!2;CL:0000317!2.64e-13!2;CL:1000448!2.64e-13!2;CL:0002308!2.64e-13!2;CL:0002140!2.64e-13!2;CL:0000362!1.79e-12!8;CL:0000622!1.67e-11!5;CL:0000154!1.14e-09!6;CL:0002573!7.30e-09!2;CL:0002077!3.16e-08!33;CL:0000066!3.74e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.24e-28;2!CL:0002159;1.53e-09;14!CL:0000317;2.87e-08;2!CL:1000448;2.87e-08;2!CL:0002308;2.87e-08;2!CL:0002140;2.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.43e-28,2;CL:0002159,1.53e-09,14;CL:0000317,2.67e-08,2;CL:1000448,2.67e-08,2;CL:0002308,2.67e-08,2;CL:0002140,2.67e-08,2;CL:0000066,3.74e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.07e-39;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-12,106;DOID:0050687,5.82e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.88e-56!9;UBERON:0001557!1.35e-31!19;UBERON:0008947!6.52e-15!38;UBERON:0003258!6.52e-15!38;UBERON:0000065!1.31e-14!53;UBERON:0000072!1.86e-14!46;UBERON:0001004!5.59e-14!72;UBERON:0002419!2.64e-13!2;UBERON:0007771!2.64e-13!2;UBERON:0003297!2.64e-13!2;UBERON:0001821!2.64e-13!2;UBERON:0003487!2.64e-13!2;UBERON:0001820!2.64e-13!2;UBERON:0005089!2.64e-13!2;UBERON:0005088!2.64e-13!2;UBERON:0000063!2.54e-08!97;UBERON:0001041!4.03e-08!98;UBERON:0001003!3.58e-07!14;UBERON:0007376!3.58e-07!14;UBERON:0007383!3.58e-07!14;UBERON:0001048!3.64e-07!168;UBERON:0000964!3.85e-07!4;UBERON:0004348!3.85e-07!4;UBERON:0005427!3.85e-07!4 | |ontology_enrichment_uberon=UBERON:0001737!2.88e-56!9;UBERON:0001557!1.35e-31!19;UBERON:0008947!6.52e-15!38;UBERON:0003258!6.52e-15!38;UBERON:0000065!1.31e-14!53;UBERON:0000072!1.86e-14!46;UBERON:0001004!5.59e-14!72;UBERON:0002419!2.64e-13!2;UBERON:0007771!2.64e-13!2;UBERON:0003297!2.64e-13!2;UBERON:0001821!2.64e-13!2;UBERON:0003487!2.64e-13!2;UBERON:0001820!2.64e-13!2;UBERON:0005089!2.64e-13!2;UBERON:0005088!2.64e-13!2;UBERON:0000063!2.54e-08!97;UBERON:0001041!4.03e-08!98;UBERON:0001003!3.58e-07!14;UBERON:0007376!3.58e-07!14;UBERON:0007383!3.58e-07!14;UBERON:0001048!3.64e-07!168;UBERON:0000964!3.85e-07!4;UBERON:0004348!3.85e-07!4;UBERON:0005427!3.85e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.64e-127;9!UBERON:0001557;5.64e-127;9!UBERON:0000072;2.47e-28;37!UBERON:0000065;7.50e-24;44!UBERON:0000964;7.47e-15;4!UBERON:0010409;7.47e-15;4!UBERON:0001004;1.55e-12;65!UBERON:0002419;2.87e-08;2!UBERON:0007771;2.87e-08;2!UBERON:0003297;2.87e-08;2!UBERON:0001821;2.87e-08;2!UBERON:0003487;2.87e-08;2!UBERON:0001820;2.87e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.07e-127,9;UBERON:0001557,7.20e-60,19;UBERON:0008947,1.31e-29,38;UBERON:0003258,1.31e-29,38;UBERON:0000072,8.50e-24,47;UBERON:0000065,1.30e-20,54;UBERON:0000964,8.02e-15,4;UBERON:0010409,8.02e-15,4;UBERON:0004348,8.02e-15,4;UBERON:0005427,8.02e-15,4;UBERON:0001004,8.12e-15,74;UBERON:0001041,1.80e-12,87;UBERON:0001048,1.49e-11,160;UBERON:0004921,7.22e-09,118;UBERON:0002419,2.67e-08,2;UBERON:0007771,2.67e-08,2;UBERON:0003297,2.67e-08,2;UBERON:0001821,2.67e-08,2;UBERON:0003487,2.67e-08,2;UBERON:0001820,2.67e-08,2;UBERON:0005089,2.67e-08,2;UBERON:0005088,2.67e-08,2;UBERON:0001007,4.78e-07,145;UBERON:0001555,4.78e-07,145;UBERON:0007026,4.78e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79703320195235,3.03452442140583,4.33819853790268,4.85293480022533,2.39667388501647,3.79632990577755,5.39325232640658,4.51309369788296,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,2.59263438078475,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79703320195235,3.03452442140583,4.33819853790268,4.85293480022533,2.39667388501647,3.79632990577755,5.39325232640658,4.51309369788296,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,2.59263438078475,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@SPINK6 | |short_description=p9@SPINK6 | ||
}} | }} |
Latest revision as of 23:39, 15 September 2015
Short description: | p9@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 8bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.43e-28 | 2 |
general ecto-epithelial cell | 1.53e-09 | 14 |
sebum secreting cell | 2.67e-08 | 2 |
epithelial cell of sweat gland | 2.67e-08 | 2 |
epithelial cell of skin gland | 2.67e-08 | 2 |
acinar cell of sebaceous gland | 2.67e-08 | 2 |
epithelial cell | 3.74e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.07e-127 | 9 |
upper respiratory tract | 7.20e-60 | 19 |
respiratory primordium | 1.31e-29 | 38 |
endoderm of foregut | 1.31e-29 | 38 |
segment of respiratory tract | 8.50e-24 | 47 |
respiratory tract | 1.30e-20 | 54 |
cornea | 8.02e-15 | 4 |
eye surface | 8.02e-15 | 4 |
optic eminence | 8.02e-15 | 4 |
corneal primordium | 8.02e-15 | 4 |
respiratory system | 8.12e-15 | 74 |
foregut | 1.80e-12 | 87 |
primordium | 1.49e-11 | 160 |
subdivision of digestive tract | 7.22e-09 | 118 |
skin gland | 2.67e-08 | 2 |
epidermis gland | 2.67e-08 | 2 |
gland of integumental system | 2.67e-08 | 2 |
sebaceous gland | 2.67e-08 | 2 |
skin sebaceous gland | 2.67e-08 | 2 |
sweat gland | 2.67e-08 | 2 |
sweat gland placode | 2.67e-08 | 2 |
sebaceous gland placode | 2.67e-08 | 2 |
digestive system | 4.78e-07 | 145 |
digestive tract | 4.78e-07 | 145 |
primitive gut | 4.78e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-12 | 106 |
cell type cancer | 5.82e-09 | 143 |