FFCP PHASE1:Hg19::chr4:90816484..90816496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22915 | |EntrezGene=22915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |HGNC=7178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=361bp_to_AB385146,HQ258009_5end | |association_with_transcript=361bp_to_AB385146,HQ258009_5end | ||
|cluster_id=chr4:90816484..90816496,+ | |||
|coexpression_cluster_id=C1946 | |coexpression_cluster_id=C1946 | ||
|description=CAGE_peak_6_at_MMRN1_5end | |description=CAGE_peak_6_at_MMRN1_5end | ||
|id=chr4:90816484..90816496,+ | |id=chr4:90816484..90816496,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.01e-15!24;CL:0005020!1.22e-12!6;CL:0002138!1.22e-12!6;CL:0005022!1.22e-12!6;CL:0000784!4.19e-10!3;CL:0000115!1.53e-09!35;CL:0002618!1.93e-09!3;CL:0000071!4.65e-07!18;CL:0002546!4.65e-07!18;CL:0002078!4.93e-07!44 | |ontology_enrichment_celltype=CL:0002139!3.01e-15!24;CL:0005020!1.22e-12!6;CL:0002138!1.22e-12!6;CL:0005022!1.22e-12!6;CL:0000784!4.19e-10!3;CL:0000115!1.53e-09!35;CL:0002618!1.93e-09!3;CL:0000071!4.65e-07!18;CL:0002546!4.65e-07!18;CL:0002078!4.93e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.88e-43;3!CL:0002138;7.44e-22;6!CL:0002139;6.91e-21;24!CL:0000451;2.96e-12;10!CL:0000115;9.29e-12;36!CL:0002544;2.40e-10;6!CL:0002078;1.17e-09;45!CL:0002545;2.31e-08;2!CL:0000071;1.25e-07;18!CL:1000413;3.44e-07;9!CL:0000213;4.95e-07;58!CL:0000215;4.95e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.94e-43,3;CL:0005020,5.03e-22,6;CL:0002138,5.03e-22,6;CL:0005022,5.03e-22,6;CL:0002139,6.79e-21,24;CL:0000115,7.26e-14,36;CL:0000451,2.79e-12,10;CL:0002078,4.83e-11,45;CL:0002544,3.04e-10,6;CL:0000213,1.67e-08,58;CL:0000215,1.67e-08,58;CL:0002545,2.87e-08,2;CL:0000071,1.40e-07,18;CL:0002546,1.40e-07,18;CL:1000413,4.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;7.44e-22;6!CL:0002546;1.25e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-11!115;UBERON:0001473!2.32e-09!8;UBERON:0004536!2.32e-09!8;UBERON:0006558!2.32e-09!8;UBERON:0002465!2.16e-07!10;UBERON:0001986!4.65e-07!18;UBERON:0004638!4.65e-07!18;UBERON:0004852!4.65e-07!18 | |ontology_enrichment_uberon=UBERON:0007023!3.18e-11!115;UBERON:0001473!2.32e-09!8;UBERON:0004536!2.32e-09!8;UBERON:0006558!2.32e-09!8;UBERON:0002465!2.16e-07!10;UBERON:0001986!4.65e-07!18;UBERON:0004638!4.65e-07!18;UBERON:0004852!4.65e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.45e-16;8!UBERON:0004536;1.45e-16;8!UBERON:0006558;1.45e-16;8!UBERON:0002465;2.21e-13;10!UBERON:0005800;2.31e-08;2!UBERON:0001515;2.31e-08;2!UBERON:0004638;1.25e-07;18!UBERON:0001986;1.25e-07;18!UBERON:0004852;1.25e-07;18!UBERON:0003915;3.44e-07;9!UBERON:0004700;3.44e-07;9!UBERON:0001917;3.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.08e-16,8;UBERON:0004536,1.08e-16,8;UBERON:0006558,1.08e-16,8;UBERON:0002465,1.75e-13,10;UBERON:0005800,2.87e-08,2;UBERON:0001515,2.87e-08,2;UBERON:0004638,1.40e-07,18;UBERON:0001986,1.40e-07,18;UBERON:0004852,1.40e-07,18;UBERON:0000055,3.32e-07,68;UBERON:0003915,4.03e-07,9;UBERON:0004700,4.03e-07,9;UBERON:0001917,4.03e-07,9 | |||
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| ||
|short_description=p6@MMRN1 | |short_description=p6@MMRN1 | ||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p6@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MMRN1_5end |
Coexpression cluster: | C1946_gastric_acute_rhabdomyosarcoma_Dendritic_Endothelial_B_Wilms |
Association with transcript: | 361bp_to_AB385146, HQ258009_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.94e-43 | 3 |
lymphangioblast | 5.03e-22 | 6 |
endothelial cell of lymphatic vessel | 5.03e-22 | 6 |
vascular lymphangioblast | 5.03e-22 | 6 |
endothelial cell of vascular tree | 6.79e-21 | 24 |
endothelial cell | 7.26e-14 | 36 |
dendritic cell | 2.79e-12 | 10 |
meso-epithelial cell | 4.83e-11 | 45 |
aortic endothelial cell | 3.04e-10 | 6 |
lining cell | 1.67e-08 | 58 |
barrier cell | 1.67e-08 | 58 |
thoracic aorta endothelial cell | 2.87e-08 | 2 |
blood vessel endothelial cell | 1.40e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.40e-07 | 18 |
endothelial cell of artery | 4.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.08e-16 | 8 |
lymph vasculature | 1.08e-16 | 8 |
lymphatic part of lymphoid system | 1.08e-16 | 8 |
lymphoid system | 1.75e-13 | 10 |
segment of aorta | 2.87e-08 | 2 |
thoracic aorta | 2.87e-08 | 2 |
blood vessel endothelium | 1.40e-07 | 18 |
endothelium | 1.40e-07 | 18 |
cardiovascular system endothelium | 1.40e-07 | 18 |
vessel | 3.32e-07 | 68 |
endothelial tube | 4.03e-07 | 9 |
arterial system endothelium | 4.03e-07 | 9 |
endothelium of artery | 4.03e-07 | 9 |