FFCP PHASE1:Hg19::chr4:74608628..74608700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3576 | |EntrezGene=3576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |HGNC=6025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_AJ227913_5end | |association_with_transcript=-154bp_to_AJ227913_5end | ||
|cluster_id=chr4:74608628..74608700,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_IL8_5end | |description=CAGE_peak_3_at_IL8_5end | ||
|id=chr4:74608628..74608700,+ | |id=chr4:74608628..74608700,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.95e-30!42;CL:0000766!9.12e-28!76;CL:0000860!5.44e-27!45;CL:0002009!2.43e-24!65;CL:0002194!8.25e-23!63;CL:0000576!8.25e-23!63;CL:0000040!8.25e-23!63;CL:0000559!8.25e-23!63;CL:0000557!8.51e-22!71;CL:0000839!7.96e-20!70;CL:0000359!7.77e-19!32;CL:0000763!1.07e-17!112;CL:0000049!1.07e-17!112;CL:0000738!1.34e-15!140;CL:0000048!2.39e-15!430;CL:0000034!1.17e-14!444;CL:0000723!1.52e-14!436;CL:0000192!5.35e-12!42;CL:0000514!5.35e-12!42;CL:0000037!3.35e-11!172;CL:0000566!3.35e-11!172;CL:0002087!4.27e-11!119;CL:0002371!9.60e-11!591;CL:0000012!3.34e-10!682;CL:0002539!5.06e-10!10;CL:0002031!5.43e-10!124;CL:0000988!5.49e-10!182;CL:0002032!8.46e-10!165;CL:0000837!8.46e-10!165;CL:0000094!1.10e-09!8;CL:0000548!2.17e-09!679;CL:0000004!2.17e-09!679;CL:0000255!2.17e-09!679;CL:0000144!7.07e-09!625;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000187!5.53e-08!54;CL:0000134!5.92e-08!358;CL:0000003!9.99e-08!722;CL:0002320!1.51e-07!365;CL:0000183!2.82e-07!59 | |ontology_enrichment_celltype=CL:0002057!4.95e-30!42;CL:0000766!9.12e-28!76;CL:0000860!5.44e-27!45;CL:0002009!2.43e-24!65;CL:0002194!8.25e-23!63;CL:0000576!8.25e-23!63;CL:0000040!8.25e-23!63;CL:0000559!8.25e-23!63;CL:0000557!8.51e-22!71;CL:0000839!7.96e-20!70;CL:0000359!7.77e-19!32;CL:0000763!1.07e-17!112;CL:0000049!1.07e-17!112;CL:0000738!1.34e-15!140;CL:0000048!2.39e-15!430;CL:0000034!1.17e-14!444;CL:0000723!1.52e-14!436;CL:0000192!5.35e-12!42;CL:0000514!5.35e-12!42;CL:0000037!3.35e-11!172;CL:0000566!3.35e-11!172;CL:0002087!4.27e-11!119;CL:0002371!9.60e-11!591;CL:0000012!3.34e-10!682;CL:0002539!5.06e-10!10;CL:0002031!5.43e-10!124;CL:0000988!5.49e-10!182;CL:0002032!8.46e-10!165;CL:0000837!8.46e-10!165;CL:0000094!1.10e-09!8;CL:0000548!2.17e-09!679;CL:0000004!2.17e-09!679;CL:0000255!2.17e-09!679;CL:0000144!7.07e-09!625;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000187!5.53e-08!54;CL:0000134!5.92e-08!358;CL:0000003!9.99e-08!722;CL:0002320!1.51e-07!365;CL:0000183!2.82e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.97e-34;33!CL:0002057;3.97e-34;33!CL:0000473;1.01e-28;39!CL:0000234;1.01e-28;39!CL:0000359;3.60e-23;32!CL:0000576;2.93e-19;48!CL:0000766;1.77e-18;69!CL:0000094;1.56e-16;8!CL:0000192;1.50e-12;43!CL:0002539;1.24e-11;10!CL:0000081;1.50e-11;11!CL:0002595;1.62e-10;5!CL:0000763;1.66e-08;100!CL:0000775;7.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.00e-40,72;CL:0000473,7.85e-38,48;CL:0000234,7.85e-38,48;CL:0000860,9.69e-37,42;CL:0002057,9.69e-37,42;CL:0002009,1.01e-34,61;CL:0002194,4.92e-32,59;CL:0000576,4.92e-32,59;CL:0000040,4.92e-32,59;CL:0000559,4.92e-32,59;CL:0000557,1.19e-30,67;CL:0000839,1.46e-27,66;CL:0000763,1.13e-25,108;CL:0000049,1.13e-25,108;CL:0000359,1.24e-24,32;CL:0000034,6.76e-23,441;CL:0000048,1.32e-22,427;CL:0000738,4.73e-22,136;CL:0000723,5.74e-22,433;CL:0000192,1.11e-16,43;CL:0000514,1.11e-16,43;CL:0000094,1.16e-16,8;CL:0002087,2.10e-15,115;CL:0000037,2.65e-15,168;CL:0002032,1.04e-14,161;CL:0000837,1.04e-14,161;CL:0002031,2.64e-14,120;CL:0000988,7.22e-14,177;CL:0000680,6.11e-12,58;CL:0000056,6.11e-12,58;CL:0000355,6.11e-12,58;CL:0000187,1.03e-11,55;CL:0000081,1.22e-11,11;CL:0002539,1.40e-11,10;CL:0002595,1.59e-10,5;CL:0000134,2.23e-10,354;CL:0000393,5.43e-10,61;CL:0000211,5.43e-10,61;CL:0002320,7.56e-10,361;CL:0000219,5.22e-08,386;CL:0000775,7.94e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.08e-27;42!CL:0000514;1.50e-12;43 | |||
|ontology_enrichment_disease=DOID:2394!2.59e-08!14;DOID:120!1.45e-07!27 | |ontology_enrichment_disease=DOID:2394!2.59e-08!14;DOID:120!1.45e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.31e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!8.58e-21!216;UBERON:0002204!9.60e-21!167;UBERON:0002371!2.16e-18!80;UBERON:0002390!1.80e-16!102;UBERON:0003061!1.80e-16!102;UBERON:0002193!5.36e-16!112;UBERON:0001474!6.03e-16!86;UBERON:0001637!2.61e-15!42;UBERON:0003509!2.61e-15!42;UBERON:0004572!2.61e-15!42;UBERON:0004765!4.48e-14!101;UBERON:0001434!4.48e-14!101;UBERON:0002405!1.79e-13!115;UBERON:0004573!3.18e-13!33;UBERON:0004571!3.18e-13!33;UBERON:0001981!7.77e-11!60;UBERON:0007500!7.77e-11!60;UBERON:0004537!7.77e-11!60;UBERON:0006965!7.77e-11!60;UBERON:0000055!1.44e-10!69;UBERON:0004237!5.06e-10!10;UBERON:0004695!5.06e-10!10;UBERON:0002111!5.06e-10!10;UBERON:0004178!5.06e-10!10;UBERON:0004872!1.30e-09!84;UBERON:0004535!5.28e-09!110;UBERON:0002049!5.57e-09!79;UBERON:0007798!5.57e-09!79;UBERON:0001009!7.24e-09!113;UBERON:0000926!9.46e-09!448;UBERON:0004120!9.46e-09!448;UBERON:0006603!9.46e-09!448;UBERON:0003914!8.16e-08!118;UBERON:0001134!2.36e-07!61;UBERON:0002036!2.36e-07!61;UBERON:0003082!2.36e-07!61;UBERON:0002384!3.55e-07!375;UBERON:0002385!7.50e-07!63;UBERON:0001015!7.50e-07!63;UBERON:0000383!7.50e-07!63 | |ontology_enrichment_uberon=UBERON:0003081!8.58e-21!216;UBERON:0002204!9.60e-21!167;UBERON:0002371!2.16e-18!80;UBERON:0002390!1.80e-16!102;UBERON:0003061!1.80e-16!102;UBERON:0002193!5.36e-16!112;UBERON:0001474!6.03e-16!86;UBERON:0001637!2.61e-15!42;UBERON:0003509!2.61e-15!42;UBERON:0004572!2.61e-15!42;UBERON:0004765!4.48e-14!101;UBERON:0001434!4.48e-14!101;UBERON:0002405!1.79e-13!115;UBERON:0004573!3.18e-13!33;UBERON:0004571!3.18e-13!33;UBERON:0001981!7.77e-11!60;UBERON:0007500!7.77e-11!60;UBERON:0004537!7.77e-11!60;UBERON:0006965!7.77e-11!60;UBERON:0000055!1.44e-10!69;UBERON:0004237!5.06e-10!10;UBERON:0004695!5.06e-10!10;UBERON:0002111!5.06e-10!10;UBERON:0004178!5.06e-10!10;UBERON:0004872!1.30e-09!84;UBERON:0004535!5.28e-09!110;UBERON:0002049!5.57e-09!79;UBERON:0007798!5.57e-09!79;UBERON:0001009!7.24e-09!113;UBERON:0000926!9.46e-09!448;UBERON:0004120!9.46e-09!448;UBERON:0006603!9.46e-09!448;UBERON:0003914!8.16e-08!118;UBERON:0001134!2.36e-07!61;UBERON:0002036!2.36e-07!61;UBERON:0003082!2.36e-07!61;UBERON:0002384!3.55e-07!375;UBERON:0002385!7.50e-07!63;UBERON:0001015!7.50e-07!63;UBERON:0000383!7.50e-07!63 | ||
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| ||
|short_description=p3@IL8 | |short_description=p3@IL8 | ||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p3@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -154bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.31e-07 | 14 |