FFCP PHASE1:Hg19::chr4:155490348..155490376,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2244 | |EntrezGene=2244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3662 | |HGNC=3662 | ||
|TSSclassifier=strong | |||
|UniProt=P02675 | |UniProt=P02675 | ||
|association_with_transcript=19bp_to_J00133_5end | |association_with_transcript=19bp_to_J00133_5end | ||
|cluster_id=chr4:155490348..155490376,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_FGB_5end | |description=CAGE_peak_5_at_FGB_5end | ||
|id=chr4:155490348..155490376,+ | |id=chr4:155490348..155490376,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.97e-40!12;CL:0000417!4.97e-40!12;CL:0000668!4.97e-40!12;CL:0000414!4.97e-40!12;CL:0000412!4.97e-40!12;CL:0000182!4.97e-40!12;CL:0000223!1.49e-12!59 | |ontology_enrichment_celltype=CL:0000181!4.97e-40!12;CL:0000417!4.97e-40!12;CL:0000668!4.97e-40!12;CL:0000414!4.97e-40!12;CL:0000412!4.97e-40!12;CL:0000182!4.97e-40!12;CL:0000223!1.49e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-17;12!CL:0002231;1.46e-08;3!CL:0002563;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-17,12;CL:0000223,1.06e-09,58;CL:0002231,1.51e-08,3;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.20e-09;11!CL:0000223;7.72e-09;58!UBERON:0009497;9.20e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.61e-41!19;UBERON:0006925!1.61e-41!19;UBERON:0008836!1.61e-41!19;UBERON:0008835!1.02e-35!22;UBERON:0003894!1.02e-35!22;UBERON:0009854!4.06e-34!23;UBERON:0007499!2.65e-31!25;UBERON:0009497!2.65e-31!25;UBERON:0000015!2.65e-31!25;UBERON:0002423!2.65e-31!25;UBERON:0006235!2.65e-31!25;UBERON:0004161!2.65e-31!25;UBERON:0005057!4.65e-30!26;UBERON:0009856!4.65e-30!26;UBERON:0002365!4.92e-25!31;UBERON:0002330!4.92e-25!31;UBERON:0005172!2.64e-24!55;UBERON:0005173!2.64e-24!55;UBERON:0002368!4.79e-22!35;UBERON:0002417!9.64e-22!61;UBERON:0000916!9.64e-22!61;UBERON:0003929!7.19e-21!54;UBERON:0000949!6.82e-17!45;UBERON:0002530!1.33e-15!59;UBERON:0005911!3.42e-13!82;UBERON:0005177!1.29e-11!107;UBERON:0009569!6.69e-11!113;UBERON:0004921!2.89e-09!129;UBERON:0004185!2.89e-09!129;UBERON:0001007!2.08e-07!155;UBERON:0001555!2.08e-07!155;UBERON:0007026!2.08e-07!155;UBERON:0002405!3.37e-07!115;UBERON:0000490!3.65e-07!138;UBERON:0001041!4.18e-07!98;UBERON:0003914!4.44e-07!118;UBERON:0005256!7.54e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!1.61e-41!19;UBERON:0006925!1.61e-41!19;UBERON:0008836!1.61e-41!19;UBERON:0008835!1.02e-35!22;UBERON:0003894!1.02e-35!22;UBERON:0009854!4.06e-34!23;UBERON:0007499!2.65e-31!25;UBERON:0009497!2.65e-31!25;UBERON:0000015!2.65e-31!25;UBERON:0002423!2.65e-31!25;UBERON:0006235!2.65e-31!25;UBERON:0004161!2.65e-31!25;UBERON:0005057!4.65e-30!26;UBERON:0009856!4.65e-30!26;UBERON:0002365!4.92e-25!31;UBERON:0002330!4.92e-25!31;UBERON:0005172!2.64e-24!55;UBERON:0005173!2.64e-24!55;UBERON:0002368!4.79e-22!35;UBERON:0002417!9.64e-22!61;UBERON:0000916!9.64e-22!61;UBERON:0003929!7.19e-21!54;UBERON:0000949!6.82e-17!45;UBERON:0002530!1.33e-15!59;UBERON:0005911!3.42e-13!82;UBERON:0005177!1.29e-11!107;UBERON:0009569!6.69e-11!113;UBERON:0004921!2.89e-09!129;UBERON:0004185!2.89e-09!129;UBERON:0001007!2.08e-07!155;UBERON:0001555!2.08e-07!155;UBERON:0007026!2.08e-07!155;UBERON:0002405!3.37e-07!115;UBERON:0000490!3.65e-07!138;UBERON:0001041!4.18e-07!98;UBERON:0003914!4.44e-07!118;UBERON:0005256!7.54e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.74e-18;31!UBERON:0002330;4.74e-18;31!UBERON:0002368;1.25e-15;33!UBERON:0000949;2.25e-11;43!UBERON:0002530;7.31e-09;57!UBERON:0005172;3.00e-08;52!UBERON:0005173;3.00e-08;52!UBERON:0001007;4.22e-08;81!UBERON:0001242;9.90e-07;4!UBERON:0001262;9.90e-07;4!UBERON:0004786;9.90e-07;4!UBERON:0004808;9.90e-07;4!UBERON:0001277;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0003929,6.87e-20,54;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0002530,1.62e-13,59;UBERON:0005911,4.47e-13,82;UBERON:0000949,1.54e-12,45;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0004921,5.84e-09,118;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0000490,3.70e-07,148;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,207.878257107803,114.990784351282,140.607997790174,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.0824158583811665,0.337017719270924,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.3794611687124,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,207.878257107803,114.990784351282,140.607997790174,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.0824158583811665,0.337017719270924,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.3794611687124,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@FGB | |short_description=p5@FGB | ||
}} | }} |
Latest revision as of 06:25, 16 September 2015
Short description: | p5@FGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 19bp_to_J00133_5end |
EntrezGene: | FGB |
HGNC: | 3662 |
UniProt: | P02675 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-17 | 12 |
endodermal cell | 1.06e-09 | 58 |
epithelial cell of prostate | 1.51e-08 | 3 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
gut epithelium | 6.87e-20 | 54 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
gland | 1.62e-13 | 59 |
endo-epithelium | 4.47e-13 | 82 |
endocrine system | 1.54e-12 | 45 |
abdomen element | 1.77e-10 | 54 |
abdominal segment element | 1.77e-10 | 54 |
abdominal segment of trunk | 1.92e-09 | 60 |
abdomen | 1.92e-09 | 60 |
subdivision of digestive tract | 5.84e-09 | 118 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |
unilaminar epithelium | 3.70e-07 | 148 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |