FFCP PHASE1:Hg19::chr4:111563076..111563124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5308 | |EntrezGene=5308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9005 | |HGNC=9005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003iaf.2_5end | |association_with_transcript=0bp_to_uc003iaf.2_5end | ||
|cluster_id=chr4:111563076..111563124,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_8_at_PITX2_5end | |description=CAGE_peak_8_at_PITX2_5end | ||
|id=chr4:111563076..111563124,- | |id=chr4:111563076..111563124,- | ||
|ontology_enrichment_celltype=CL:0002367!3.17e-22!2;CL:0002322!3.44e-09!5 | |ontology_enrichment_celltype=CL:0002367!3.17e-22!2;CL:0002322!3.44e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002363;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.91e-41;1!UBERON:0001045;2.21e-40;1!CL:0000008;5.69e-21;2!UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:2355!1.81e-11!1 | |ontology_enrichment_disease=DOID:2355!1.81e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005969!3.17e-22!2;UBERON:0003956!3.17e-22!2;UBERON:0000020!2.23e-16!23;UBERON:0001032!1.11e-15!24;UBERON:0004456!1.11e-15!24;UBERON:0000970!2.31e-13!20;UBERON:0002104!1.01e-12!21;UBERON:0001154!3.65e-12!1;UBERON:0001153!3.65e-12!1;UBERON:0001155!3.56e-11!9;UBERON:0004907!2.17e-09!5;UBERON:0000019!2.84e-09!19;UBERON:0000047!2.84e-09!19;UBERON:0004088!2.84e-09!19;UBERON:0003072!2.84e-09!19;UBERON:0003071!2.84e-09!19;UBERON:0004128!2.84e-09!19;UBERON:0000059!3.07e-09!11;UBERON:0001456!2.09e-08!21;UBERON:0002203!4.99e-08!6;UBERON:0001768!4.99e-08!6;UBERON:0001801!2.02e-07!14 | |ontology_enrichment_uberon=UBERON:0005969!3.17e-22!2;UBERON:0003956!3.17e-22!2;UBERON:0000020!2.23e-16!23;UBERON:0001032!1.11e-15!24;UBERON:0004456!1.11e-15!24;UBERON:0000970!2.31e-13!20;UBERON:0002104!1.01e-12!21;UBERON:0001154!3.65e-12!1;UBERON:0001153!3.65e-12!1;UBERON:0001155!3.56e-11!9;UBERON:0004907!2.17e-09!5;UBERON:0000019!2.84e-09!19;UBERON:0000047!2.84e-09!19;UBERON:0004088!2.84e-09!19;UBERON:0003072!2.84e-09!19;UBERON:0003071!2.84e-09!19;UBERON:0004128!2.84e-09!19;UBERON:0000059!3.07e-09!11;UBERON:0001456!2.09e-08!21;UBERON:0002203!4.99e-08!6;UBERON:0001768!4.99e-08!6;UBERON:0001801!2.02e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.21e-40;1!UBERON:0001153;2.21e-40;1!UBERON:0009854;2.21e-40;1!UBERON:0003566;5.69e-21;2!UBERON:0001777;5.69e-21;2!UBERON:0000970;1.34e-18;20!UBERON:0002104;9.30e-18;21!UBERON:0000020;2.71e-16;23!UBERON:0001032;1.19e-15;24!UBERON:0004456;1.19e-15;24!UBERON:0003891;3.42e-11;4!UBERON:0009856;3.42e-11;4!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0000019;2.17e-09;19!UBERON:0000047;2.17e-09;19!UBERON:0004088;2.17e-09;19!UBERON:0010230;2.17e-09;19!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0004907;3.22e-09;5!UBERON:0001456;1.37e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.21e-40,1;UBERON:0001153,2.21e-40,1;UBERON:0001045,2.21e-40,1;UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0000970,9.30e-18,21;UBERON:0002104,9.30e-18,21;UBERON:0000020,1.19e-15,24;UBERON:0001032,1.19e-15,24;UBERON:0004456,1.19e-15,24;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0004907,3.22e-09,5;UBERON:0000019,5.93e-09,20;UBERON:0000047,5.93e-09,20;UBERON:0010312,5.93e-09,20;UBERON:0004088,5.93e-09,20;UBERON:0010230,5.93e-09,20;UBERON:0003072,5.93e-09,20;UBERON:0004128,5.93e-09,20;UBERON:0003071,5.93e-09,20;UBERON:0001456,3.15e-08,22;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6 | |||
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|short_description=p8@PITX2 | |short_description=p8@PITX2 | ||
}} | }} |
Latest revision as of 17:24, 24 September 2015
Short description: | p8@PITX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PITX2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_uc003iaf.2_5end |
EntrezGene: | PITX2 |
HGNC: | 9005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.21e-40 | 1 |
caecum | 2.21e-40 | 1 |
midgut | 2.21e-40 | 1 |
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
eye | 9.30e-18 | 21 |
visual system | 9.30e-18 | 21 |
sense organ | 1.19e-15 | 24 |
sensory system | 1.19e-15 | 24 |
entire sense organ system | 1.19e-15 | 24 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
lower digestive tract | 3.22e-09 | 5 |
camera-type eye | 5.93e-09 | 20 |
simple eye | 5.93e-09 | 20 |
immature eye | 5.93e-09 | 20 |
ocular region | 5.93e-09 | 20 |
eyeball of camera-type eye | 5.93e-09 | 20 |
optic cup | 5.93e-09 | 20 |
optic vesicle | 5.93e-09 | 20 |
eye primordium | 5.93e-09 | 20 |
face | 3.15e-08 | 22 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |