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FFCP PHASE1:Hg19::chr3:55313580..55313599,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:55313580..55313599,-
|coexpression_cluster_id=C126
|coexpression_cluster_id=C126
|description=CAGE_peak_at_chr3:55313580..55313599,-
|description=CAGE_peak_at_chr3:55313580..55313599,-
|id=chr3:55313580..55313599,-
|id=chr3:55313580..55313599,-
|ontology_enrichment_celltype=CL:0000167!9.92e-13!1;CL:0000164!9.92e-13!1;CL:0000502!9.92e-13!1;CL:0000172!9.92e-13!1;CL:0000173!9.92e-13!1;CL:0002351!9.92e-13!1;CL:0000054!4.83e-07!2;CL:0000137!4.83e-07!2;CL:0000092!4.83e-07!2;CL:1000415!7.20e-07!2
|ontology_enrichment_celltype=CL:0000167!9.92e-13!1;CL:0000164!9.92e-13!1;CL:0000502!9.92e-13!1;CL:0000172!9.92e-13!1;CL:0000173!9.92e-13!1;CL:0002351!9.92e-13!1;CL:0000054!4.83e-07!2;CL:0000137!4.83e-07!2;CL:0000092!4.83e-07!2;CL:1000415!7.20e-07!2
|ontology_enrichment_celltype_v019=CL:0000167;2.05e-29;1!CL:0000164;2.05e-29;1!CL:0000502;2.05e-29;1!CL:0000172;2.05e-29;1!CL:0000173;2.05e-29;1!CL:0000054;1.33e-15;2!CL:0000137;1.33e-15;2!CL:0000092;1.33e-15;2!CL:0002092;2.66e-12;10
|ontology_enrichment_celltype_v019_2=CL:0000167,1.78e-29,1;CL:0000164,1.78e-29,1;CL:0000502,1.78e-29,1;CL:0000172,1.78e-29,1;CL:0000173,1.78e-29,1;CL:0002351,1.78e-29,1;CL:0000054,1.33e-15,2;CL:0000137,1.33e-15,2;CL:0000092,1.33e-15,2;CL:0002092,2.66e-12,10
|ontology_enrichment_development_v019=CL:0002351;2.05e-29;1
|ontology_enrichment_disease=DOID:0060085!7.89e-13!1;DOID:3165!7.89e-13!1;DOID:0060121!7.89e-13!1;DOID:2438!7.89e-13!1;DOID:4418!7.89e-13!1;DOID:4430!9.92e-13!1;DOID:0050619!1.11e-12!1;DOID:1357!1.11e-12!1;DOID:4960!1.40e-12!1;DOID:0070004!1.40e-12!1;DOID:3112!3.45e-12!1;DOID:5409!5.40e-12!4;DOID:169!2.09e-08!6;DOID:1325!3.14e-07!7;DOID:3904!3.14e-07!7;DOID:162!3.24e-07!235;DOID:200!4.83e-07!2;DOID:4305!4.83e-07!2;DOID:14566!5.06e-07!239;DOID:0050615!8.16e-07!16
|ontology_enrichment_disease=DOID:0060085!7.89e-13!1;DOID:3165!7.89e-13!1;DOID:0060121!7.89e-13!1;DOID:2438!7.89e-13!1;DOID:4418!7.89e-13!1;DOID:4430!9.92e-13!1;DOID:0050619!1.11e-12!1;DOID:1357!1.11e-12!1;DOID:4960!1.40e-12!1;DOID:0070004!1.40e-12!1;DOID:3112!3.45e-12!1;DOID:5409!5.40e-12!4;DOID:169!2.09e-08!6;DOID:1325!3.14e-07!7;DOID:3904!3.14e-07!7;DOID:162!3.24e-07!235;DOID:200!4.83e-07!2;DOID:4305!4.83e-07!2;DOID:14566!5.06e-07!239;DOID:0050615!8.16e-07!16
|ontology_enrichment_disease_v019=DOID:0060085;9.99e-30;1!DOID:3165;9.99e-30;1!DOID:0060121;9.99e-30;1!DOID:2438;9.99e-30;1!DOID:4418;9.99e-30;1!DOID:0050619;2.05e-29;1!DOID:1357;2.05e-29;1!DOID:4430;2.05e-29;1!DOID:4960;4.20e-29;1!DOID:0070004;4.20e-29;1!DOID:200;1.33e-15;2!DOID:4305;1.33e-15;2!DOID:3119;3.72e-09;14!DOID:0060072;1.82e-08;4!DOID:5409;2.43e-08;4!DOID:0050615;5.00e-08;16
|ontology_enrichment_disease_v019_2=DOID:0060085,9.99e-30,1;DOID:3165,9.99e-30,1;DOID:0060121,9.99e-30,1;DOID:2438,9.99e-30,1;DOID:4418,9.99e-30,1;DOID:4430,1.78e-29,1;DOID:0050619,2.37e-29,1;DOID:1357,2.37e-29,1;DOID:4960,4.20e-29,1;DOID:0070004,4.20e-29,1;DOID:200,1.33e-15,2;DOID:4305,1.33e-15,2;DOID:3119,3.72e-09,14;DOID:0060072,1.82e-08,4;DOID:5409,2.43e-08,4;DOID:0050615,5.09e-08,16;DOID:0050686,1.34e-07,137
|ontology_enrichment_uberon=UBERON:0001764!1.11e-12!1;UBERON:0001825!1.11e-12!1;UBERON:0005418!1.57e-12!1;UBERON:0001389!1.57e-12!1;UBERON:0000026!1.57e-12!1;UBERON:0008784!1.57e-12!1;UBERON:0006058!1.57e-12!1;UBERON:0003663!1.57e-12!1;UBERON:0001383!1.57e-12!1;UBERON:0004256!1.57e-12!1;UBERON:0002529!1.57e-12!1;UBERON:0004708!1.57e-12!1;UBERON:0002101!1.57e-12!1;UBERON:0004709!1.57e-12!1;UBERON:0003661!1.57e-12!1;UBERON:0002471!1.57e-12!1;UBERON:0004357!1.57e-12!1;UBERON:0009872!1.57e-12!1;UBERON:0004347!1.57e-12!1;UBERON:0005420!1.57e-12!1;UBERON:0005732!1.57e-12!1;UBERON:0006057!1.57e-12!1;UBERON:0000978!1.57e-12!1;UBERON:0002103!1.57e-12!1;UBERON:0001665!1.57e-12!1;UBERON:0003823!1.57e-12!1;UBERON:0000154!1.57e-12!1;UBERON:0005733!1.57e-12!1;UBERON:0005730!1.57e-12!1;UBERON:0001630!6.80e-07!2;UBERON:0005090!6.80e-07!2
|ontology_enrichment_uberon=UBERON:0001764!1.11e-12!1;UBERON:0001825!1.11e-12!1;UBERON:0005418!1.57e-12!1;UBERON:0001389!1.57e-12!1;UBERON:0000026!1.57e-12!1;UBERON:0008784!1.57e-12!1;UBERON:0006058!1.57e-12!1;UBERON:0003663!1.57e-12!1;UBERON:0001383!1.57e-12!1;UBERON:0004256!1.57e-12!1;UBERON:0002529!1.57e-12!1;UBERON:0004708!1.57e-12!1;UBERON:0002101!1.57e-12!1;UBERON:0004709!1.57e-12!1;UBERON:0003661!1.57e-12!1;UBERON:0002471!1.57e-12!1;UBERON:0004357!1.57e-12!1;UBERON:0009872!1.57e-12!1;UBERON:0004347!1.57e-12!1;UBERON:0005420!1.57e-12!1;UBERON:0005732!1.57e-12!1;UBERON:0006057!1.57e-12!1;UBERON:0000978!1.57e-12!1;UBERON:0002103!1.57e-12!1;UBERON:0001665!1.57e-12!1;UBERON:0003823!1.57e-12!1;UBERON:0000154!1.57e-12!1;UBERON:0005733!1.57e-12!1;UBERON:0005730!1.57e-12!1;UBERON:0001630!6.80e-07!2;UBERON:0005090!6.80e-07!2
|ontology_enrichment_uberon_v019=UBERON:0001764;2.05e-29;1!UBERON:0001825;2.05e-29;1!UBERON:0002371;2.03e-10;12!UBERON:0000014;1.82e-08;4!UBERON:0001474;2.95e-07;18
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.37e-29,1;UBERON:0001825,2.37e-29,1;UBERON:0000014,1.82e-08,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,26.2303287447946,0,0,0.480952921509202,0,0,0,0,145.684153184808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.051462160015,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,8.92274048107784,0,0.150962843566674,0,0,21.6345956326301,0,10.6054446195732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,26.2303287447946,0,0,0.480952921509202,0,0,0,0,145.684153184808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.051462160015,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,8.92274048107784,0,0.150962843566674,0,0,21.6345956326301,0,10.6054446195732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr3:55313580..55313599,-
|short_description=p@chr3:55313580..55313599,-
}}
}}

Latest revision as of 22:42, 29 July 2015

Short description:p@chr3:55313580..55313599, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr3:55313580..55313599, -
Coexpression cluster:C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data