FFCP PHASE1:Hg19::chr3:185655763..185655783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6434 | |EntrezGene=6434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10781 | |HGNC=10781 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485530_5end | |association_with_transcript=0bp_to_ENST00000485530_5end | ||
|cluster_id=chr3:185655763..185655783,- | |||
|coexpression_cluster_id=C613 | |coexpression_cluster_id=C613 | ||
|description=CAGE_peak_1_at_TRA2B_5end | |description=CAGE_peak_1_at_TRA2B_5end | ||
|id=chr3:185655763..185655783,- | |id=chr3:185655763..185655783,- | ||
|ontology_enrichment_celltype=CL:0000037!6.84e-50!172;CL:0000566!6.84e-50!172;CL:0002032!1.40e-45!165;CL:0000837!1.40e-45!165;CL:0000988!2.06e-45!182;CL:0000738!4.10e-38!140;CL:0002031!3.92e-33!124;CL:0002087!2.00e-32!119;CL:0000763!1.71e-29!112;CL:0000049!1.71e-29!112;CL:0000860!2.18e-24!45;CL:0002057!2.03e-23!42;CL:0000766!9.37e-21!76;CL:0000557!2.56e-19!71;CL:0000839!6.68e-18!70;CL:0002009!1.78e-17!65;CL:0000063!8.47e-17!578;CL:0002194!1.71e-16!63;CL:0000576!1.71e-16!63;CL:0000040!1.71e-16!63;CL:0000559!1.71e-16!63;CL:0000134!1.39e-15!358;CL:0000219!4.53e-15!390;CL:0000012!1.21e-14!682;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!7.75e-14!52;CL:0000548!1.80e-13!679;CL:0000004!1.80e-13!679;CL:0000255!1.80e-13!679;CL:0002320!3.63e-13!365;CL:0000003!6.99e-13!722;CL:0000034!1.36e-11!444;CL:0000723!2.88e-10!436;CL:0000048!4.63e-10!430;CL:0000084!5.76e-08!25;CL:0000827!5.76e-08!25;CL:0000144!5.09e-07!625 | |ontology_enrichment_celltype=CL:0000037!6.84e-50!172;CL:0000566!6.84e-50!172;CL:0002032!1.40e-45!165;CL:0000837!1.40e-45!165;CL:0000988!2.06e-45!182;CL:0000738!4.10e-38!140;CL:0002031!3.92e-33!124;CL:0002087!2.00e-32!119;CL:0000763!1.71e-29!112;CL:0000049!1.71e-29!112;CL:0000860!2.18e-24!45;CL:0002057!2.03e-23!42;CL:0000766!9.37e-21!76;CL:0000557!2.56e-19!71;CL:0000839!6.68e-18!70;CL:0002009!1.78e-17!65;CL:0000063!8.47e-17!578;CL:0002194!1.71e-16!63;CL:0000576!1.71e-16!63;CL:0000040!1.71e-16!63;CL:0000559!1.71e-16!63;CL:0000134!1.39e-15!358;CL:0000219!4.53e-15!390;CL:0000012!1.21e-14!682;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!7.75e-14!52;CL:0000548!1.80e-13!679;CL:0000004!1.80e-13!679;CL:0000255!1.80e-13!679;CL:0002320!3.63e-13!365;CL:0000003!6.99e-13!722;CL:0000034!1.36e-11!444;CL:0000723!2.88e-10!436;CL:0000048!4.63e-10!430;CL:0000084!5.76e-08!25;CL:0000827!5.76e-08!25;CL:0000144!5.09e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-18;33!CL:0002057;6.36e-18;33!CL:0000473;1.47e-12;39!CL:0000234;1.47e-12;39!CL:0000576;2.74e-12;48!CL:0000766;1.43e-10;69!CL:0002087;1.52e-10;104!CL:0000763;7.62e-10;100!CL:0000988;5.52e-09;177!CL:0000542;7.52e-09;53!CL:0000738;1.48e-08;136!CL:0000084;5.77e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.75e-49,168;CL:0000988,3.29e-45,177;CL:0002032,3.52e-45,161;CL:0000837,3.52e-45,161;CL:0000738,9.02e-38,136;CL:0002031,8.05e-33,120;CL:0002087,3.96e-32,115;CL:0000763,3.35e-29,108;CL:0000049,3.35e-29,108;CL:0000860,2.03e-23,42;CL:0002057,2.03e-23,42;CL:0000766,1.53e-20,72;CL:0000473,3.62e-20,48;CL:0000234,3.62e-20,48;CL:0000557,4.13e-19,67;CL:0000839,1.13e-17,66;CL:0002009,2.84e-17,61;CL:0002194,2.78e-16,59;CL:0000576,2.78e-16,59;CL:0000040,2.78e-16,59;CL:0000559,2.78e-16,59;CL:0000134,7.74e-15,354;CL:0000219,2.50e-14,386;CL:0000542,4.22e-14,53;CL:0000051,4.22e-14,53;CL:0000838,7.75e-14,52;CL:0002320,1.75e-12,361;CL:0000034,1.09e-10,441;CL:0000723,1.99e-09,433;CL:0000048,3.12e-09,427;CL:0000084,5.76e-08,25;CL:0000827,5.76e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-17;42!CL:0000051;7.52e-09;53!CL:0000049;1.37e-08;108 | |||
|ontology_enrichment_disease=DOID:162!1.22e-19!235;DOID:14566!1.81e-18!239;DOID:2531!1.58e-12!51;DOID:0060083!1.58e-12!51;DOID:1240!5.09e-12!39;DOID:0050686!8.85e-10!137;DOID:8692!9.02e-10!31;DOID:0050687!7.35e-09!143;DOID:305!2.49e-08!106 | |ontology_enrichment_disease=DOID:162!1.22e-19!235;DOID:14566!1.81e-18!239;DOID:2531!1.58e-12!51;DOID:0060083!1.58e-12!51;DOID:1240!5.09e-12!39;DOID:0050686!8.85e-10!137;DOID:8692!9.02e-10!31;DOID:0050687!7.35e-09!143;DOID:305!2.49e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;8.83e-10;39!DOID:8692;1.53e-09;31!DOID:2531;2.95e-08;51!DOID:0060083;2.95e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.22e-19,235;DOID:14566,1.81e-18,239;DOID:2531,1.58e-12,51;DOID:0060083,1.58e-12,51;DOID:1240,5.09e-12,39;DOID:0050686,8.85e-10,137;DOID:8692,9.02e-10,31;DOID:0050687,7.35e-09,143;DOID:305,2.49e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.85e-16!80;UBERON:0001474!1.42e-15!86;UBERON:0002390!2.01e-14!102;UBERON:0003061!2.01e-14!102;UBERON:0002384!2.02e-13!375;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002193!3.56e-11!112;UBERON:0002405!2.92e-09!115 | |ontology_enrichment_uberon=UBERON:0002371!2.85e-16!80;UBERON:0001474!1.42e-15!86;UBERON:0002390!2.01e-14!102;UBERON:0003061!2.01e-14!102;UBERON:0002384!2.02e-13!375;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002193!3.56e-11!112;UBERON:0002405!2.92e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@TRA2B | |short_description=p1@TRA2B | ||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p1@TRA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRA2B_5end |
Coexpression cluster: | C613_CD4_CD19_CD8_Natural_CD14_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000485530_5end |
EntrezGene: | TRA2B |
HGNC: | 10781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.74e-16 | 76 |
bone element | 3.06e-15 | 82 |
hematopoietic system | 4.73e-14 | 98 |
blood island | 4.73e-14 | 98 |
connective tissue | 9.95e-13 | 371 |
immune system | 8.16e-12 | 93 |
skeletal element | 2.25e-11 | 90 |
hemolymphoid system | 8.55e-11 | 108 |
skeletal system | 8.09e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.22e-19 | 235 |
disease of cellular proliferation | 1.81e-18 | 239 |
hematologic cancer | 1.58e-12 | 51 |
immune system cancer | 1.58e-12 | 51 |
leukemia | 5.09e-12 | 39 |
organ system cancer | 8.85e-10 | 137 |
myeloid leukemia | 9.02e-10 | 31 |
cell type cancer | 7.35e-09 | 143 |
carcinoma | 2.49e-08 | 106 |