FFCP PHASE1:Hg19::chr3:112357721..112357731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112357721..112357731,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_at_chr3:112357721..112357731,- | |description=CAGE_peak_at_chr3:112357721..112357731,- | ||
|id=chr3:112357721..112357731,- | |id=chr3:112357721..112357731,- | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-22!180;CL:0000057!1.87e-17!75;CL:0002620!1.78e-09!23;CL:0000499!6.22e-08!27 | |ontology_enrichment_celltype=CL:0000055!2.23e-22!180;CL:0000057!1.87e-17!75;CL:0002620!1.78e-09!23;CL:0000499!6.22e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.97e-20;23!CL:1000306;6.16e-14;4!CL:0002547;6.16e-14;4!CL:0000136;9.20e-12;13!CL:0002615;4.62e-11;3!CL:0002579;1.32e-10;3!CL:0000057;3.47e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-21,76;CL:0002620,5.38e-20,23;CL:1000306,7.71e-14,4;CL:0002547,7.71e-14,4;CL:0000136,6.97e-13,15;CL:0002615,4.44e-11,3;CL:0002579,1.04e-10,3;CL:0002320,3.52e-10,361;CL:0000134,6.19e-10,354;CL:0000048,2.20e-09,427;CL:0000723,4.37e-09,433;CL:0000219,1.01e-08,386;CL:0000034,1.06e-08,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.12e-15;5!DOID:450;1.12e-15;5!DOID:66;1.12e-15;5!DOID:423;1.12e-15;5!DOID:0080000;1.12e-15;5!DOID:11722;1.12e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.01e-16,5;DOID:450,7.01e-16,5;DOID:66,7.01e-16,5;DOID:423,7.01e-16,5;DOID:0080000,7.01e-16,5;DOID:11722,7.01e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.64e-08!6;UBERON:0002358!3.64e-08!6;UBERON:0003684!3.64e-08!6;UBERON:0001178!3.64e-08!6;UBERON:0002199!5.65e-08!45;UBERON:0002416!5.65e-08!45;UBERON:0003102!9.87e-08!95;UBERON:0004457!5.47e-07!12;UBERON:0000042!5.47e-07!12 | |ontology_enrichment_uberon=UBERON:0003688!3.64e-08!6;UBERON:0002358!3.64e-08!6;UBERON:0003684!3.64e-08!6;UBERON:0001178!3.64e-08!6;UBERON:0002199!5.65e-08!45;UBERON:0002416!5.65e-08!45;UBERON:0003102!9.87e-08!95;UBERON:0004457!5.47e-07!12;UBERON:0000042!5.47e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.93e-22;9!UBERON:0000042;2.93e-22;9!UBERON:0003688;6.14e-20;6!UBERON:0002358;6.14e-20;6!UBERON:0003684;6.14e-20;6!UBERON:0001178;6.14e-20;6!UBERON:0004797;6.16e-14;4!UBERON:0000415;6.16e-14;4!UBERON:0007240;6.16e-14;4!UBERON:0005742;6.16e-14;4!UBERON:0005734;6.16e-14;4!UBERON:0004664;6.16e-14;4!UBERON:0004663;6.16e-14;4!UBERON:0002199;3.32e-10;46!UBERON:0002416;3.32e-10;46!UBERON:0001013;4.98e-10;14!UBERON:0002097;1.47e-08;41!UBERON:0003102;1.70e-07;50!UBERON:0002384;5.65e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.67e-20,6;UBERON:0002358,4.67e-20,6;UBERON:0003684,4.67e-20,6;UBERON:0001178,4.67e-20,6;UBERON:0004457,1.46e-16,12;UBERON:0000042,1.46e-16,12;UBERON:0000415,7.71e-14,4;UBERON:0007240,7.71e-14,4;UBERON:0005742,7.71e-14,4;UBERON:0005734,7.71e-14,4;UBERON:0004664,7.71e-14,4;UBERON:0004663,7.71e-14,4;UBERON:0002199,1.40e-13,46;UBERON:0002416,1.40e-13,46;UBERON:0004797,7.91e-12,7;UBERON:0002097,1.09e-11,41;UBERON:0002384,2.58e-10,371;UBERON:0001013,6.33e-10,14;UBERON:0003102,1.57e-07,99 | |||
|phase1_expression=0.181678379270557,2.99740733447376,2.81908808191942,3.00219895059391,5.81049422755474,3.48935409640147,2.53299878168311,0.631719873426831,1.82829939739887,0,0,0,0.263766978228454,0.37129905888014,0.662794751455832,1.34465029290355,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.255725123687061,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,4.30543739659571,1.32409180813219,15.7760141411848,3.54668382198357,1.68203280042692,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,1.18800285728205,0,0,0,0,0.125118519871964,0.277064115484183,0,0.919463387397059,0.150238058906597,0.226864366320042,2.69084453533293,1.49490172172997,1.48352330811693,2.70081986475962,1.75189299705346,1.8034837803194,0.744467425326359,1.18143432568886,1.36411807225678,2.52433774244115,1.10459878370759,1.93975268182574,5.32514388774922,1.0075209822764,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0.224262168690721,0.43596006883328,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,1.03985430765404,0.892144943985809,0.315404830067869,0,0.601892199455438,4.5481500811197,0,1.32845119707087,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.907170879989041,1.98486246255021,0.61384789315225,2.80660094433074,3.58789617915963,1.53512174720011,3.86049410744658,0,0.925258162815933,0,0.246381468041427,0,0.348631135379878,0,0.40101294060657,0.0920809889358963,0.459257792658427,0.728364672026868,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.689182862422653,0.107420244868274,0.145016693914229,0,0.356128142586949,0,0.192190067365106,0,0,0.929691098594572,10.7036197922418,0,0,0,0,0.74129687641568,0.143124886741991,0,0.632758849437452,0.762520775695299,0,0,0.95460974377781,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,0.989838023675989,1.13008116620243,0,0,0,0,1.31178950409327,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0,1.47775344708365,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.34823682632161,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,1.95497680890578,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17199840701485,0,2.93928624098468,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,1.04478362020812,1.40227985908335,1.66441758450784,0.568209015825267,1.76097531226803,0.889811221596536,1.14420034198462,3.78077309408098,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0.53168342911599,0.521745061811734,0.901545653983311,2.28483127301277,0,0,0.429642228169954,0.464033759878494,0.796191777397232,0,0,1.01024846629776,0,0,0,0.260994291965212,1.58694147858591,0.926089897295336,0,0.71635536432595,0.308801447160972,1.53498834705095,0,0.578742114812744,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.067991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| ||
|short_description=p@chr3:112357721..112357731,- | |short_description=p@chr3:112357721..112357731,- | ||
}} | }} |
Latest revision as of 14:18, 29 July 2015
Short description: | p@chr3:112357721..112357731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112357721..112357731, - |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-21 | 76 |
skin fibroblast | 5.38e-20 | 23 |
fibroblast of tunica adventitia of artery | 7.71e-14 | 4 |
fibroblast of the aortic adventitia | 7.71e-14 | 4 |
fat cell | 6.97e-13 | 15 |
adipocyte of omentum tissue | 4.44e-11 | 3 |
omentum preadipocyte | 1.04e-10 | 3 |
connective tissue cell | 3.52e-10 | 361 |
mesenchymal cell | 6.19e-10 | 354 |
multi fate stem cell | 2.20e-09 | 427 |
somatic stem cell | 4.37e-09 | 433 |
motile cell | 1.01e-08 | 386 |
stem cell | 1.06e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.67e-20 | 6 |
peritoneum | 4.67e-20 | 6 |
abdominal cavity | 4.67e-20 | 6 |
visceral peritoneum | 4.67e-20 | 6 |
cavity lining | 1.46e-16 | 12 |
serous membrane | 1.46e-16 | 12 |
artery wall | 7.71e-14 | 4 |
tunica adventitia of artery | 7.71e-14 | 4 |
adventitia | 7.71e-14 | 4 |
tunica adventitia of blood vessel | 7.71e-14 | 4 |
aorta tunica adventitia | 7.71e-14 | 4 |
aorta wall | 7.71e-14 | 4 |
integument | 1.40e-13 | 46 |
integumental system | 1.40e-13 | 46 |
blood vessel layer | 7.91e-12 | 7 |
skin of body | 1.09e-11 | 41 |
connective tissue | 2.58e-10 | 371 |
adipose tissue | 6.33e-10 | 14 |
surface structure | 1.57e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.01e-16 | 5 |
myotonic disease | 7.01e-16 | 5 |
muscle tissue disease | 7.01e-16 | 5 |
myopathy | 7.01e-16 | 5 |
muscular disease | 7.01e-16 | 5 |
myotonic dystrophy | 7.01e-16 | 5 |