FFCP PHASE1:Hg19::chr2:75751179..75751194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC018659_5end | |association_with_transcript=0bp_to_BC018659_5end | ||
|cluster_id=chr2:75751179..75751194,+ | |||
|coexpression_cluster_id=C221 | |coexpression_cluster_id=C221 | ||
|description=CAGE_peak_1_at_BC018659_5end | |description=CAGE_peak_1_at_BC018659_5end | ||
|id=chr2:75751179..75751194,+ | |id=chr2:75751179..75751194,+ | ||
|ontology_enrichment_celltype=CL:0000322!5.72e-09!3;CL:0002149!9.71e-09!6;CL:0002255!9.71e-09!6;CL:0000181!6.41e-08!12;CL:0000417!6.41e-08!12;CL:0000668!6.41e-08!12;CL:0000414!6.41e-08!12;CL:0000412!6.41e-08!12;CL:0000182!6.41e-08!12;CL:0000223!6.68e-08!59;CL:1001319!8.98e-07!1;CL:1000600!8.98e-07!1 | |ontology_enrichment_celltype=CL:0000322!5.72e-09!3;CL:0002149!9.71e-09!6;CL:0002255!9.71e-09!6;CL:0000181!6.41e-08!12;CL:0000417!6.41e-08!12;CL:0000668!6.41e-08!12;CL:0000414!6.41e-08!12;CL:0000412!6.41e-08!12;CL:0000182!6.41e-08!12;CL:0000223!6.68e-08!59;CL:1001319!8.98e-07!1;CL:1000600!8.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.71e-30;3!CL:0000182;2.46e-17;12!CL:0002253;3.43e-12;2!CL:0000082;3.74e-11;19!CL:0002202;7.22e-11;9!CL:0002632;7.22e-11;9!CL:0002368;8.31e-08;13!CL:0002563;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.71e-30,3;CL:0000182,2.46e-17,12;CL:0000223,9.48e-14,58;CL:0002253,3.62e-12,2;CL:0000082,3.80e-11,19;CL:0002202,7.22e-11,9;CL:0002632,7.22e-11,9;CL:0002368,8.31e-08,13 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.55e-26;30!UBERON:0004161;7.68e-19;11!UBERON:0009497;4.65e-16;13!UBERON:0003104;1.06e-11;31!CL:0000223;1.64e-08;58!UBERON:0008947;1.61e-07;29 | |||
|ontology_enrichment_disease=DOID:3910!4.94e-13!2;DOID:162!7.17e-12!235;DOID:14566!1.65e-11!239;DOID:305!2.17e-10!106;DOID:0050687!2.85e-10!143;DOID:3001!9.71e-09!6;DOID:0050686!4.08e-08!137;DOID:2355!3.57e-07!1;DOID:3111!5.69e-07!1;DOID:3603!5.69e-07!1;DOID:0050619!9.51e-07!1;DOID:1357!9.51e-07!1;DOID:3119!9.98e-07!14 | |ontology_enrichment_disease=DOID:3910!4.94e-13!2;DOID:162!7.17e-12!235;DOID:14566!1.65e-11!239;DOID:305!2.17e-10!106;DOID:0050687!2.85e-10!143;DOID:3001!9.71e-09!6;DOID:0050686!4.08e-08!137;DOID:2355!3.57e-07!1;DOID:3111!5.69e-07!1;DOID:3603!5.69e-07!1;DOID:0050619!9.51e-07!1;DOID:1357!9.51e-07!1;DOID:3119!9.98e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.99e-45;2!DOID:3908;9.47e-19;5!DOID:1324;6.02e-14;15!DOID:1325;1.08e-13;7!DOID:3904;1.08e-13;7!DOID:0050615;4.05e-13;16!DOID:3905;7.22e-11;9!DOID:3119;3.66e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.00e-45,2;DOID:3908,9.47e-19,5;DOID:1324,6.16e-14,15;DOID:1325,1.08e-13,7;DOID:3904,1.08e-13,7;DOID:305,4.08e-13,106;DOID:0050615,4.14e-13,16;DOID:3905,7.22e-11,9;DOID:0050687,1.17e-09,143;DOID:3119,3.66e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007499!1.09e-13!25;UBERON:0009856!4.09e-13!26;UBERON:0002394!4.65e-13!4;UBERON:0003928!4.65e-13!4;UBERON:0004903!4.94e-13!2;UBERON:0002173!4.94e-13!2;UBERON:0002186!4.94e-13!2;UBERON:0002294!5.38e-13!7;UBERON:0001173!5.38e-13!7;UBERON:0004912!5.38e-13!7;UBERON:0009497!2.06e-10!25;UBERON:0000015!2.06e-10!25;UBERON:0002423!2.06e-10!25;UBERON:0006235!2.06e-10!25;UBERON:0004161!2.06e-10!25;UBERON:0000058!5.69e-10!26;UBERON:0005911!3.84e-09!82;UBERON:0004821!5.72e-09!3;UBERON:0003215!5.72e-09!3;UBERON:0002299!5.72e-09!3;UBERON:0006524!5.72e-09!3;UBERON:0008874!5.72e-09!3;UBERON:0002169!5.72e-09!3;UBERON:0004894!5.72e-09!3;UBERON:0008835!6.90e-09!22;UBERON:0003894!6.90e-09!22;UBERON:0006947!8.73e-09!3;UBERON:0004054!8.73e-09!3;UBERON:0009854!1.78e-08!23;UBERON:0000060!6.30e-08!12;UBERON:0004175!1.85e-07!25;UBERON:0001000!2.82e-07!1;UBERON:0005352!2.82e-07!1;UBERON:0000998!3.78e-07!1;UBERON:0006868!3.78e-07!1;UBERON:0004913!4.51e-07!1;UBERON:0003703!4.51e-07!1;UBERON:0001174!4.51e-07!1;UBERON:0004914!4.51e-07!1;UBERON:0003929!4.78e-07!54;UBERON:0000466!4.79e-07!126;UBERON:0005904!8.75e-07!4;UBERON:0004645!8.98e-07!1;UBERON:0001256!8.98e-07!1;UBERON:0001259!8.98e-07!1;UBERON:0001764!9.51e-07!1;UBERON:0001825!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0007499!1.09e-13!25;UBERON:0009856!4.09e-13!26;UBERON:0002394!4.65e-13!4;UBERON:0003928!4.65e-13!4;UBERON:0004903!4.94e-13!2;UBERON:0002173!4.94e-13!2;UBERON:0002186!4.94e-13!2;UBERON:0002294!5.38e-13!7;UBERON:0001173!5.38e-13!7;UBERON:0004912!5.38e-13!7;UBERON:0009497!2.06e-10!25;UBERON:0000015!2.06e-10!25;UBERON:0002423!2.06e-10!25;UBERON:0006235!2.06e-10!25;UBERON:0004161!2.06e-10!25;UBERON:0000058!5.69e-10!26;UBERON:0005911!3.84e-09!82;UBERON:0004821!5.72e-09!3;UBERON:0003215!5.72e-09!3;UBERON:0002299!5.72e-09!3;UBERON:0006524!5.72e-09!3;UBERON:0008874!5.72e-09!3;UBERON:0002169!5.72e-09!3;UBERON:0004894!5.72e-09!3;UBERON:0008835!6.90e-09!22;UBERON:0003894!6.90e-09!22;UBERON:0006947!8.73e-09!3;UBERON:0004054!8.73e-09!3;UBERON:0009854!1.78e-08!23;UBERON:0000060!6.30e-08!12;UBERON:0004175!1.85e-07!25;UBERON:0001000!2.82e-07!1;UBERON:0005352!2.82e-07!1;UBERON:0000998!3.78e-07!1;UBERON:0006868!3.78e-07!1;UBERON:0004913!4.51e-07!1;UBERON:0003703!4.51e-07!1;UBERON:0001174!4.51e-07!1;UBERON:0004914!4.51e-07!1;UBERON:0003929!4.78e-07!54;UBERON:0000466!4.79e-07!126;UBERON:0005904!8.75e-07!4;UBERON:0004645!8.98e-07!1;UBERON:0001256!8.98e-07!1;UBERON:0001259!8.98e-07!1;UBERON:0001764!9.51e-07!1;UBERON:0001825!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.99e-45;2!UBERON:0002173;3.99e-45;2!UBERON:0002186;3.99e-45;2!UBERON:0004821;1.71e-30;3!UBERON:0007499;1.71e-30;3!UBERON:0003215;1.71e-30;3!UBERON:0010368;1.71e-30;3!UBERON:0009911;1.71e-30;3!UBERON:0002299;1.71e-30;3!UBERON:0006524;1.71e-30;3!UBERON:0008874;1.71e-30;3!UBERON:0002169;1.71e-30;3!UBERON:0004894;1.71e-30;3!UBERON:0001000;3.67e-23;1!UBERON:0005352;3.67e-23;1!UBERON:0009856;3.68e-23;4!UBERON:0000058;1.52e-20;10!UBERON:0002107;3.31e-11;19!UBERON:0006925;3.31e-11;19!UBERON:0004802;3.74e-11;19!UBERON:0000115;3.74e-11;19!UBERON:0002048;1.01e-09;22!UBERON:0004807;1.01e-09;22!UBERON:0000117;1.01e-09;22!UBERON:0000171;1.01e-09;22!UBERON:0000170;1.01e-09;22!UBERON:0002423;1.14e-08;25!UBERON:0006947;1.26e-08;3!UBERON:0004054;1.26e-08;3!UBERON:0005911;4.92e-08;36!UBERON:0007196;6.99e-07;15!UBERON:0001558;6.99e-07;15!UBERON:0005904;8.85e-07;4!UBERON:0001052;9.90e-07;4!UBERON:0001242;9.90e-07;4!UBERON:0001262;9.90e-07;4!UBERON:0004786;9.90e-07;4!UBERON:0004808;9.90e-07;4!UBERON:0001277;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.00e-45,2;UBERON:0002173,4.00e-45,2;UBERON:0002186,4.00e-45,2;UBERON:0004821,1.71e-30,3;UBERON:0003215,1.71e-30,3;UBERON:0010368,1.71e-30,3;UBERON:0009911,1.71e-30,3;UBERON:0002299,1.71e-30,3;UBERON:0006524,1.71e-30,3;UBERON:0008874,1.71e-30,3;UBERON:0002169,1.71e-30,3;UBERON:0004894,1.71e-30,3;UBERON:0001000,3.28e-23,1;UBERON:0005352,3.28e-23,1;UBERON:0007499,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0005911,4.38e-13,82;UBERON:0002107,3.31e-11,19;UBERON:0006925,3.31e-11,19;UBERON:0008836,3.31e-11,19;UBERON:0000058,3.67e-11,19;UBERON:0004802,3.80e-11,19;UBERON:0000115,3.80e-11,19;UBERON:0008835,9.12e-10,22;UBERON:0003894,9.12e-10,22;UBERON:0002048,1.03e-09,22;UBERON:0000117,1.03e-09,22;UBERON:0000171,1.03e-09,22;UBERON:0000170,1.03e-09,22;UBERON:0005597,1.03e-09,22;UBERON:0000118,1.03e-09,22;UBERON:0009854,2.28e-09,23;UBERON:0001041,3.56e-09,87;UBERON:0004921,5.76e-09,118;UBERON:0009497,1.14e-08,25;UBERON:0000015,1.14e-08,25;UBERON:0002423,1.14e-08,25;UBERON:0006235,1.14e-08,25;UBERON:0004161,1.14e-08,25;UBERON:0006947,1.21e-08,3;UBERON:0004054,1.21e-08,3;UBERON:0005177,6.83e-08,101;UBERON:0004807,9.22e-08,28;UBERON:0001007,2.90e-07,145;UBERON:0001555,2.90e-07,145;UBERON:0007026,2.90e-07,145;UBERON:0009569,4.17e-07,112;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31;UBERON:0003929,6.31e-07,54;UBERON:0007196,6.99e-07,15;UBERON:0001558,6.99e-07,15;UBERON:0005904,8.61e-07,4 | |||
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|short_description=p1@BC018659 | |short_description=p1@BC018659 | ||
}} | }} |
Latest revision as of 12:26, 29 July 2015
Short description: | p1@BC018659 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC018659_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 0bp_to_BC018659_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.71e-30 | 3 |
hepatocyte | 2.46e-17 | 12 |
endodermal cell | 9.48e-14 | 58 |
epithelial cell of large intestine | 3.62e-12 | 2 |
epithelial cell of lung | 3.80e-11 | 19 |
epithelial cell of tracheobronchial tree | 7.22e-11 | 9 |
epithelial cell of lower respiratory tract | 7.22e-11 | 9 |
respiratory epithelial cell | 8.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.00e-45 | 2 |
non-small cell lung carcinoma | 9.47e-19 | 5 |
lung cancer | 6.16e-14 | 15 |
bronchus cancer | 1.08e-13 | 7 |
bronchogenic carcinoma | 1.08e-13 | 7 |
carcinoma | 4.08e-13 | 106 |
respiratory system cancer | 4.14e-13 | 16 |
lung carcinoma | 7.22e-11 | 9 |
cell type cancer | 1.17e-09 | 143 |
gastrointestinal system cancer | 3.66e-07 | 14 |