FFCP PHASE1:Hg19::chr2:224863013..224863047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:224863013..224863047,- | |||
|coexpression_cluster_id=C354 | |coexpression_cluster_id=C354 | ||
|description=CAGE_peak_at_chr2:224863013..224863047,- | |description=CAGE_peak_at_chr2:224863013..224863047,- | ||
|id=chr2:224863013..224863047,- | |id=chr2:224863013..224863047,- | ||
|ontology_enrichment_celltype=CL:0000055!2.31e-22!180;CL:0000057!5.39e-13!75;CL:0002620!7.11e-08!23 | |ontology_enrichment_celltype=CL:0000055!2.31e-22!180;CL:0000057!5.39e-13!75;CL:0002620!7.11e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.60e-10;3!CL:0000135;2.76e-10;3!CL:0000388;2.76e-10;3!CL:0002579;3.98e-10;3!CL:0000499;1.05e-08;28!CL:0002334;1.32e-08;12!CL:0000153;5.21e-08;9!CL:0000447;5.21e-08;9!CL:1000306;2.08e-07;4!CL:0002547;2.08e-07;4!CL:0000056;3.34e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.69e-13,76;CL:0000135,2.70e-10,3;CL:0000388,2.70e-10,3;CL:0002541,2.96e-10,3;CL:0002579,3.55e-10,3;CL:0000499,7.24e-09,28;CL:0002334,9.35e-09,12;CL:0000153,3.54e-08,9;CL:0000447,3.54e-08,9;CL:0000515,2.82e-07,4;CL:1000306,2.95e-07,4;CL:0002547,2.95e-07,4;CL:0000048,4.44e-07,427;CL:0000723,8.15e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000515;3.34e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.17e-10;3!DOID:127;3.17e-10;3!DOID:0060072;9.48e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.24e-10,3;DOID:127,3.24e-10,3;DOID:0060072,9.63e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.32e-08!83;UBERON:0002329!6.32e-08!83;UBERON:0003077!6.32e-08!83;UBERON:0003059!6.32e-08!83;UBERON:0007282!6.32e-08!83;UBERON:0009618!6.32e-08!83;UBERON:0007285!6.32e-08!83;UBERON:0000486!6.32e-08!82;UBERON:0003102!8.88e-08!95;UBERON:0004290!4.39e-07!70;UBERON:0004923!4.56e-07!57 | |ontology_enrichment_uberon=UBERON:0000914!6.32e-08!83;UBERON:0002329!6.32e-08!83;UBERON:0003077!6.32e-08!83;UBERON:0003059!6.32e-08!83;UBERON:0007282!6.32e-08!83;UBERON:0009618!6.32e-08!83;UBERON:0007285!6.32e-08!83;UBERON:0000486!6.32e-08!82;UBERON:0003102!8.88e-08!95;UBERON:0004290!4.39e-07!70;UBERON:0004923!4.56e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.11e-15;9!UBERON:0000042;2.11e-15;9!UBERON:0003688;2.72e-12;6!UBERON:0002358;2.72e-12;6!UBERON:0003684;2.72e-12;6!UBERON:0001178;2.72e-12;6!UBERON:0003124;2.60e-10;3!UBERON:0000920;2.60e-10;3!UBERON:0007846;2.76e-10;3!UBERON:0000043;2.76e-10;3!UBERON:0007845;2.76e-10;3!UBERON:0005406;1.57e-07;2!UBERON:0005631;1.91e-07;10!UBERON:0000158;1.91e-07;10!UBERON:0004797;2.08e-07;4!UBERON:0000415;2.08e-07;4!UBERON:0007240;2.08e-07;4!UBERON:0005742;2.08e-07;4!UBERON:0005734;2.08e-07;4!UBERON:0004664;2.08e-07;4!UBERON:0004663;2.08e-07;4!UBERON:0004923;3.37e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.20e-12,6;UBERON:0002358,4.20e-12,6;UBERON:0003684,4.20e-12,6;UBERON:0001178,4.20e-12,6;UBERON:0004457,2.84e-11,12;UBERON:0000042,2.84e-11,12;UBERON:0004923,3.02e-11,66;UBERON:0007846,2.70e-10,3;UBERON:0000043,2.70e-10,3;UBERON:0007845,2.70e-10,3;UBERON:0000920,2.96e-10,3;UBERON:0005406,1.60e-07,2;UBERON:0000415,2.95e-07,4;UBERON:0007240,2.95e-07,4;UBERON:0005742,2.95e-07,4;UBERON:0005734,2.95e-07,4;UBERON:0004664,2.95e-07,4;UBERON:0004663,2.95e-07,4 | |||
|phase1_expression=0.181678379270557,1.92690471501885,1.26858963686374,1.0007329835313,0.446961094427288,10.4680622892044,0,0.631719873426831,0,0,0,0,0.263766978228454,0.247532705920093,1.32558950291166,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.50401373190767,1.44846518960824,0,14.1124112387764,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,11.9273268406876,1.01304409331664,0.397227542439656,8.03142538096678,3.54668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0,0,0,0.234321431833797,0,0,1.94283284717341,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0,0.206651562351531,0,1.48360157567134,1.82032272387605,0,0.168336113954066,0,0,0.438977620880838,0.919463387397059,1.20190447125277,0.226864366320042,0.717558542755448,0.640672166455702,1.05965950579781,0.900273288253207,0.618315175430633,0.772921620136887,2.04728541964749,1.18143432568886,0.487185025805993,0,1.28869858099219,0.484938170456436,2.4850671476163,0.806016785821122,0,0,0.272746120590835,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,1.56449532329816,2.57296375277154,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0.763976851116555,1.17217447210047,0,1.7480673759565,0.300343057843917,0.571652865261156,0,0,0.07333828582095,0.904902010304444,0,0,0.797814349754612,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,3.90909528002464,2.87666851570537,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,1.60586089917446,0.788512075169673,0.819989904948992,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,1.82455590382974,0,0,0,0,0,0,0,0,2.72918588600655,0.767309866440312,1.96462066103151,3.97231362692673,2.55853624533352,13.511729376063,5.93672265779964,0.154209693802656,0,0,0,0.116210378459959,0,3.40860999515584,0.276242966807689,0,0.364182336013434,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,0,0.6069466851333,0,3.1481234683064,1.3940745403212,0.924100740528266,0.532306030317022,0.869932992075073,0,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0.706874414074119,0.404364963146632,1.58510321173008,0.421258456238981,0,2.68084838594413,1.05650146756755,0.136499911407986,0.989838023675989,1.13008116620243,0.551365343546124,0.66343897524122,4.82295973779139,0,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0,0.392996164052485,0,0,10.7664894001809,1.97576935775941,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.14870036263921,0,0,0,0.562677665642051,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,7.65602783356607,2.10674464824283,21.854425816764,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.189559738885464,0.150323419414493,0,0,1.65495977937749,0.313932918407225,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0.19871461170299,0,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0.248505071130865,0,0.407712618220842,0.732219924186332,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0.446342914883745,0,2.52209918479682,0,0,0.164831716762333,0.13480708770837,0,0,0,0.272406812223151,0.964518890790115,0.412618309791701,0,0,0,0,0,0,0,0,1.07572403599707,0.383830394638891,0,0,0,4.88699641578341,3.45688596480507,6.20515984207877,0,0,0.511164065356265,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0.573409195690071,0,0,0,0,0.909894705249887,0,0,0,0,0,0,0.554805861502613,0.947015026375446,0.50313580350515,0.889811221596536,0.915360273587694,0.151230923763239,1.39893480524502,0.887130899937803,0,0.449803112163605,0,4.5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| ||
|short_description=p@chr2:224863013..224863047,- | |short_description=p@chr2:224863013..224863047,- | ||
}} | }} |
Latest revision as of 07:12, 29 July 2015
Short description: | p@chr2:224863013..224863047, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224863013..224863047, - |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.69e-13 | 76 |
fibrocyte | 2.70e-10 | 3 |
tendon cell | 2.70e-10 | 3 |
chorionic membrane mesenchymal stem cell | 2.96e-10 | 3 |
omentum preadipocyte | 3.55e-10 | 3 |
stromal cell | 7.24e-09 | 28 |
preadipocyte | 9.35e-09 | 12 |
GAG secreting cell | 3.54e-08 | 9 |
carbohydrate secreting cell | 3.54e-08 | 9 |
skeletal muscle myoblast | 2.82e-07 | 4 |
fibroblast of tunica adventitia of artery | 2.95e-07 | 4 |
fibroblast of the aortic adventitia | 2.95e-07 | 4 |
multi fate stem cell | 4.44e-07 | 427 |
somatic stem cell | 8.15e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.20e-12 | 6 |
peritoneum | 4.20e-12 | 6 |
abdominal cavity | 4.20e-12 | 6 |
visceral peritoneum | 4.20e-12 | 6 |
cavity lining | 2.84e-11 | 12 |
serous membrane | 2.84e-11 | 12 |
organ component layer | 3.02e-11 | 66 |
dense regular connective tissue | 2.70e-10 | 3 |
tendon | 2.70e-10 | 3 |
regular connective tissue | 2.70e-10 | 3 |
egg chorion | 2.96e-10 | 3 |
perirenal fat | 1.60e-07 | 2 |
artery wall | 2.95e-07 | 4 |
tunica adventitia of artery | 2.95e-07 | 4 |
adventitia | 2.95e-07 | 4 |
tunica adventitia of blood vessel | 2.95e-07 | 4 |
aorta tunica adventitia | 2.95e-07 | 4 |
aorta wall | 2.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.24e-10 | 3 |
leiomyoma | 3.24e-10 | 3 |
benign neoplasm | 9.63e-08 | 4 |