FFCP PHASE1:Hg19::chr2:223289034..223289045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=-190bp_to_ENST00000321276_5end | |association_with_transcript=-190bp_to_ENST00000321276_5end | ||
|cluster_id=chr2:223289034..223289045,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_11_at_SGPP2_5end | |description=CAGE_peak_11_at_SGPP2_5end | ||
|id=chr2:223289034..223289045,+ | |id=chr2:223289034..223289045,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.17e-24!42;CL:0000860!3.86e-22!45;CL:0002194!1.27e-19!63;CL:0000576!1.27e-19!63;CL:0000040!1.27e-19!63;CL:0000559!1.27e-19!63;CL:0002009!1.04e-18!65;CL:0000839!1.17e-16!70;CL:0000557!2.77e-16!71;CL:0000766!1.44e-14!76;CL:0002087!7.68e-14!119;CL:0002031!4.67e-12!124;CL:0000738!5.58e-10!140;CL:0000763!5.10e-07!112;CL:0000049!5.10e-07!112 | |ontology_enrichment_celltype=CL:0002057!2.17e-24!42;CL:0000860!3.86e-22!45;CL:0002194!1.27e-19!63;CL:0000576!1.27e-19!63;CL:0000040!1.27e-19!63;CL:0000559!1.27e-19!63;CL:0002009!1.04e-18!65;CL:0000839!1.17e-16!70;CL:0000557!2.77e-16!71;CL:0000766!1.44e-14!76;CL:0002087!7.68e-14!119;CL:0002031!4.67e-12!124;CL:0000738!5.58e-10!140;CL:0000763!5.10e-07!112;CL:0000049!5.10e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.45e-58;33!CL:0002057;4.45e-58;33!CL:0000473;2.62e-52;39!CL:0000234;2.62e-52;39!CL:0000576;4.43e-25;48!CL:0000766;4.13e-23;69!CL:0000763;1.73e-10;100!CL:0002087;2.95e-10;104!CL:0000235;3.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.28e-61,48;CL:0000234,1.28e-61,48;CL:0000860,7.63e-56,42;CL:0002057,7.63e-56,42;CL:0002194,8.45e-49,59;CL:0000576,8.45e-49,59;CL:0000040,8.45e-49,59;CL:0000559,8.45e-49,59;CL:0002009,3.82e-47,61;CL:0000839,1.94e-43,66;CL:0000557,9.20e-43,67;CL:0000766,1.17e-39,72;CL:0000763,1.06e-25,108;CL:0000049,1.06e-25,108;CL:0002087,5.46e-24,115;CL:0002031,6.90e-23,120;CL:0000738,6.71e-20,136;CL:0002032,2.09e-16,161;CL:0000837,2.09e-16,161;CL:0000037,1.30e-15,168;CL:0000988,1.11e-14,177;CL:0000134,7.98e-08,354;CL:0002320,1.30e-07,361;CL:0000235,4.30e-07,6;CL:0000219,7.28e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-39;42!CL:0000049;2.04e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.29e-14!102;UBERON:0003061!4.29e-14!102;UBERON:0001049!8.33e-14!57;UBERON:0005068!8.33e-14!57;UBERON:0006241!8.33e-14!57;UBERON:0007135!8.33e-14!57;UBERON:0002371!2.33e-13!80;UBERON:0002193!1.27e-12!112;UBERON:0002780!1.64e-12!41;UBERON:0001890!1.64e-12!41;UBERON:0006240!1.64e-12!41;UBERON:0003080!4.49e-12!42;UBERON:0002616!7.87e-12!59;UBERON:0001474!9.06e-12!86;UBERON:0001893!1.13e-11!34;UBERON:0002791!1.18e-10!33;UBERON:0002020!2.93e-10!34;UBERON:0003528!2.93e-10!34;UBERON:0007023!3.23e-10!115;UBERON:0004765!4.01e-10!101;UBERON:0001434!4.01e-10!101;UBERON:0001869!5.22e-10!32;UBERON:0000955!1.07e-09!69;UBERON:0006238!1.07e-09!69;UBERON:0003075!1.56e-09!86;UBERON:0007284!1.56e-09!86;UBERON:0002405!5.60e-09!115;UBERON:0003056!5.65e-09!61;UBERON:0002346!9.50e-09!90;UBERON:0001017!1.23e-08!82;UBERON:0000062!4.16e-08!511;UBERON:0005743!6.79e-08!86;UBERON:0000073!8.02e-08!94;UBERON:0001016!8.02e-08!94 | |ontology_enrichment_uberon=UBERON:0002390!4.29e-14!102;UBERON:0003061!4.29e-14!102;UBERON:0001049!8.33e-14!57;UBERON:0005068!8.33e-14!57;UBERON:0006241!8.33e-14!57;UBERON:0007135!8.33e-14!57;UBERON:0002371!2.33e-13!80;UBERON:0002193!1.27e-12!112;UBERON:0002780!1.64e-12!41;UBERON:0001890!1.64e-12!41;UBERON:0006240!1.64e-12!41;UBERON:0003080!4.49e-12!42;UBERON:0002616!7.87e-12!59;UBERON:0001474!9.06e-12!86;UBERON:0001893!1.13e-11!34;UBERON:0002791!1.18e-10!33;UBERON:0002020!2.93e-10!34;UBERON:0003528!2.93e-10!34;UBERON:0007023!3.23e-10!115;UBERON:0004765!4.01e-10!101;UBERON:0001434!4.01e-10!101;UBERON:0001869!5.22e-10!32;UBERON:0000955!1.07e-09!69;UBERON:0006238!1.07e-09!69;UBERON:0003075!1.56e-09!86;UBERON:0007284!1.56e-09!86;UBERON:0002405!5.60e-09!115;UBERON:0003056!5.65e-09!61;UBERON:0002346!9.50e-09!90;UBERON:0001017!1.23e-08!82;UBERON:0000062!4.16e-08!511;UBERON:0005743!6.79e-08!86;UBERON:0000073!8.02e-08!94;UBERON:0001016!8.02e-08!94 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.82e-37,76;UBERON:0001474,1.43e-34,82;UBERON:0004765,2.64e-31,90;UBERON:0002405,3.19e-30,93;UBERON:0002390,1.45e-28,98;UBERON:0003061,1.45e-28,98;UBERON:0001434,6.03e-28,100;UBERON:0002193,1.06e-25,108;UBERON:0002204,1.01e-15,167;UBERON:0003081,1.88e-12,203;UBERON:0000926,4.75e-08,315;UBERON:0004120,4.75e-08,315;UBERON:0006603,4.75e-08,315;UBERON:0002384,2.53e-07,371 | |||
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|short_description=p11@SGPP2 | |short_description=p11@SGPP2 | ||
}} | }} |
Latest revision as of 23:30, 24 September 2015
Short description: | p11@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -190bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.28e-61 | 48 |
phagocyte | 1.28e-61 | 48 |
classical monocyte | 7.63e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.63e-56 | 42 |
monopoietic cell | 8.45e-49 | 59 |
monocyte | 8.45e-49 | 59 |
monoblast | 8.45e-49 | 59 |
promonocyte | 8.45e-49 | 59 |
macrophage dendritic cell progenitor | 3.82e-47 | 61 |
myeloid lineage restricted progenitor cell | 1.94e-43 | 66 |
granulocyte monocyte progenitor cell | 9.20e-43 | 67 |
myeloid leukocyte | 1.17e-39 | 72 |
myeloid cell | 1.06e-25 | 108 |
common myeloid progenitor | 1.06e-25 | 108 |
nongranular leukocyte | 5.46e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 6.90e-23 | 120 |
leukocyte | 6.71e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-16 | 161 |
hematopoietic stem cell | 1.30e-15 | 168 |
hematopoietic cell | 1.11e-14 | 177 |
mesenchymal cell | 7.98e-08 | 354 |
connective tissue cell | 1.30e-07 | 361 |
macrophage | 4.30e-07 | 6 |
motile cell | 7.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.82e-37 | 76 |
bone element | 1.43e-34 | 82 |
skeletal element | 2.64e-31 | 90 |
immune system | 3.19e-30 | 93 |
hematopoietic system | 1.45e-28 | 98 |
blood island | 1.45e-28 | 98 |
skeletal system | 6.03e-28 | 100 |
hemolymphoid system | 1.06e-25 | 108 |
musculoskeletal system | 1.01e-15 | 167 |
lateral plate mesoderm | 1.88e-12 | 203 |
mesoderm | 4.75e-08 | 315 |
mesoderm-derived structure | 4.75e-08 | 315 |
presumptive mesoderm | 4.75e-08 | 315 |
connective tissue | 2.53e-07 | 371 |