FFCP PHASE1:Hg19::chr19:17958832..17958861,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:17958832..17958861,-
|short_description=p2@JAK3
|description=CAGE_peak_2_at_JAK3_5end
|association_with_transcript=0bp_to_ENST00000458235,ENST00000526008,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3718 | |EntrezGene=3718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6193 | |HGNC=6193 | ||
|TSSclassifier=strong | |||
|UniProt=P52333 | |UniProt=P52333 | ||
|association_with_transcript=0bp_to_ENST00000458235,ENST00000526008,NM_000215,uc002nhn.3,uc002nho.2,uc010ebh.2,uc010xpx.1,uc010xpy.1_5end | |||
|cluster_id=chr19:17958832..17958861,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_JAK3_5end | |||
|id=chr19:17958832..17958861,- | |||
|ontology_enrichment_celltype=CL:0000738!2.13e-33!140;CL:0000988!2.49e-32!182;CL:0000037!8.42e-32!172;CL:0000566!8.42e-32!172;CL:0002087!1.03e-29!119;CL:0002032!1.27e-28!165;CL:0000837!1.27e-28!165;CL:0000542!2.53e-24!53;CL:0000051!2.53e-24!53;CL:0002031!2.91e-24!124;CL:0000838!5.40e-24!52;CL:0000084!8.98e-16!25;CL:0000827!8.98e-16!25;CL:0002320!1.40e-13!365;CL:0000791!2.20e-12!18;CL:0000789!2.20e-12!18;CL:0002420!2.20e-12!18;CL:0002419!2.20e-12!18;CL:0000790!2.20e-12!18;CL:0000134!2.43e-12!358;CL:0002057!3.96e-11!42;CL:0000766!7.70e-10!76;CL:0000860!3.09e-09!45;CL:0000763!5.13e-09!112;CL:0000049!5.13e-09!112;CL:0000945!2.99e-08!24;CL:0000826!2.99e-08!24;CL:0000219!3.39e-08!390;CL:0000048!3.98e-08!430;CL:0000625!5.91e-08!11;CL:0000034!1.65e-07!444;CL:0002194!2.72e-07!63;CL:0000576!2.72e-07!63;CL:0000040!2.72e-07!63;CL:0000559!2.72e-07!63;CL:0000723!2.79e-07!436;CL:0002009!8.06e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.56e-21;25!CL:0000542;5.31e-18;53!CL:0000791;1.98e-16;18!CL:0000789;1.98e-16;18!CL:0002419;1.98e-16;18!CL:0002087;1.54e-13;104!CL:0000625;2.54e-10;11!CL:0000945;3.58e-10;24!CL:0000988;1.78e-09;177!CL:0000738;1.01e-08;136!CL:0000094;3.17e-08;8!CL:0000576;4.53e-08;48!CL:0000236;1.88e-07;13!CL:0000860;4.24e-07;33!CL:0002057;4.24e-07;33!CL:0000624;7.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-44,177;CL:0000738,1.80e-44,136;CL:0000037,5.85e-43,168;CL:0002087,2.35e-41,115;CL:0002032,1.45e-38,161;CL:0000837,1.45e-38,161;CL:0002031,3.81e-34,120;CL:0000542,5.82e-33,53;CL:0000051,5.82e-33,53;CL:0000838,1.66e-32,52;CL:0000084,3.77e-21,25;CL:0000827,3.77e-21,25;CL:0000791,1.79e-16,18;CL:0000789,1.79e-16,18;CL:0002420,1.79e-16,18;CL:0002419,1.79e-16,18;CL:0000790,1.79e-16,18;CL:0000766,2.23e-13,72;CL:0000860,4.16e-12,42;CL:0002057,4.16e-12,42;CL:0002320,5.29e-12,361;CL:0000473,1.54e-11,48;CL:0000234,1.54e-11,48;CL:0000763,1.67e-11,108;CL:0000049,1.67e-11,108;CL:0000134,5.19e-11,354;CL:0000945,8.87e-11,24;CL:0000826,8.87e-11,24;CL:0000625,2.25e-10,11;CL:0002194,7.85e-10,59;CL:0000576,7.85e-10,59;CL:0000040,7.85e-10,59;CL:0000559,7.85e-10,59;CL:0002009,3.87e-09,61;CL:0000557,1.07e-08,67;CL:0000236,1.87e-08,14;CL:0000094,2.57e-08,8;CL:0000839,3.05e-08,66;CL:0000219,2.77e-07,386;CL:0002393,5.91e-07,9;CL:0002397,5.91e-07,9;CL:0000624,7.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;5.31e-18;53!CL:0000790;1.98e-16;18!CL:0002057;5.90e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.41e-16!102;UBERON:0003061!3.41e-16!102;UBERON:0002193!5.24e-15!112;UBERON:0002384!5.44e-13!375;UBERON:0000178!1.64e-10!15;UBERON:0000179!1.64e-10!15;UBERON:0000463!1.64e-10!15;UBERON:0007023!1.87e-10!115;UBERON:0002405!4.91e-07!115;UBERON:0002371!4.94e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.91e-14;15!UBERON:0000179;5.91e-14;15!UBERON:0000463;5.91e-14;15!UBERON:0002390;4.52e-12;32!UBERON:0002193;7.10e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.79e-21,98;UBERON:0003061,7.79e-21,98;UBERON:0002193,8.20e-19,108;UBERON:0000178,6.84e-14,15;UBERON:0000179,6.84e-14,15;UBERON:0000463,6.84e-14,15;UBERON:0002384,4.47e-12,371;UBERON:0002405,1.86e-10,93;UBERON:0002371,2.28e-08,76;UBERON:0004177,5.37e-07,7;UBERON:0005057,5.37e-07,7;UBERON:0001474,6.67e-07,82;UBERON:0003081,7.86e-07,203 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.247532705920093,1.32558950291166,0,0,0,0,0.861847406537515,0.204000691244253,0.313454721478088,0,0,0.502170558379211,3.132949635666,2.95562122019805,3.46327437780189,5.90046415273356,8.44424675813868,2.94150634300544,0,0.30120591877825,0,0.232401601740905,0,1.76160263600908,2.76997704265939,3.81034450193269,6.72733699219141,1.34349284543955,2.91504299417082,2.31818010870768,1.01778767145695,1.51150377475524,1.69808842831471,2.32429036905685,1.23350366406548,1.23882548358041,2.58923153089935,3.07392847834921,3.54723344832878,1.37898272294647,1.29096936716765,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,2.44867113896722,0.320929027076094,1.27867425159808,6.59702600373432,2.79249120670285,3.40979800426155,1.7412554317715,1.70215567407342,0,3.76872997885115,1.5644487552606,2.17188844705117,2.42159801053347,0.736555271975129,0.316462387440884,3.38008458099107,4.03948169933583,2.30624510059213,1.90958672949042,2.10247649978109,1.6072558669708,2.85012743741249,5.17183360717634,4.20127553658658,3.51992488922645,4.36910889009705,6.22656477704488,2.56038133539904,1.20118796110804,2.87376219977242,1.32208974556972,1.90810750907073,1.70763890732835,4.69789751496751,3.82273228125229,3.96513985737078,2.80254281490768,2.10707267820062,13.9663936780821,12.9693551707224,12.5416914389701,12.8733601450822,8.79990119910694,7.101717086021,1.94826728407911,19.1625985842499,9.42738903919479,7.3106185212595,14.3526047795458,17.9327847615945,22.1100890851793,26.6389405457955,17.4100511205084,15.3595635439578,16.6080950741508,11.2367147797679,26.1338809512442,16.4298546911471,9.96373283364995,9.27794102803101,11.3858861408776,8.91983160107471,7.81300144627702,7.60361635558699,5.72185452495537,8.95906278080929,4.99722906209383,11.3653080981128,9.03240796613151,7.25784275609037,9.62784704820626,9.99288386791313,2.43806866313962,3.35350429851818,1.40648818027883,0,0.50133791063589,0,0,0.486634870302636,0.567208902984407,0.665188192387692,0.614843499851882,0.72038491523742,0.364295288292542,0,0.324547393654683,0.348259474598534,0.797747763113191,4.05434061319081,2.28797964312051,4.45749001595478,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0,14.495845917967,7.75560528296651,0.872188104285069,1.49091585508596,0.12663051166458,0.264818361626438,1.14734648299525,0.354668382198357,1.12135520028461,0,1.48000529050296,1.8672662123986,0.404132016209064,1.14423332179421,2.27036141467397,3.45705554687999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0,0.300476117813194,0.340296549480063,0.717558542755448,0.213557388818567,0.423863802319124,1.20036438433761,0.309157587715317,1.28820270022815,0.558350568994769,0.168776332241266,0.194874010322397,1.26216887122057,0.644349290496095,0.161646056818812,1.06502877754984,0.10075209822764,0.508681776931463,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,3.85944562915731,1.38134921352481,1.39310378409594,7.21879481669586,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,4.41026134156626,0,0.982827216677626,0,2.20731549707325,0,1.20097467208968,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0.70445216541493,0.433099343283221,0,0.190254152234598,0,0,1.23108503043699,1.8720341211139,1.78357394746474,0,0.16798212819886,0,0,0,0,0,2.28925928434388,0,0.144119953416961,0.37872730027914,0.126995788584338,0,0,1.71072446022705,0,0.300343057843917,0,0.784917590417525,1.74384027533312,0.4400297149257,0,7.15312891703765,0.845302752556,0,1.04007436911366,1.02882949704857,2.83698264046557,0.799266537048298,0.428933980974443,4.88359444852299,2.46972101034231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,10.3118332474045,8.07826116827902,8.84073056924021,9.24069861214188,0.508189248444927,0,0,0.167516265334349,0,26.9642528620986,35.899375104483,21.9640222121099,1.47229790062968,2.00068208423871,0.813795071099207,1.24782516918484,0,0,0,0.601892199455438,2.27407504055985,0,0,0.553107505625109,0.60818530127658,2.74121620447837,3.77457766191941,7.85718499266972,6.03999762292127,10.2458455491307,0,0,0.30239029332968,0.248107807818777,1.2276957863045,0.280660094433074,0.384417447767103,2.55853624533352,1.76939313257968,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0.574072240823034,0.182091168006717,0.917870904715969,0,0.385076685522074,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.431831832204279,1.54227252690289,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.650756789328606,2.88514832613622,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,1.07452572308291,0,0.644521469209642,1.16013355131383,0.596586391912706,0.0890320356467374,0.16528491536097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| ||
|short_description=p2@JAK3 | |||
}} | }} |
Latest revision as of 13:13, 16 September 2015
Short description: | p2@JAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAK3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000458235, ENST00000526008, NM_000215, uc002nhn.3, uc002nho.2, uc010ebh.2, uc010xpx.1, uc010xpy.1_5end |
EntrezGene: | JAK3 |
HGNC: | 6193 |
UniProt: | P52333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.79e-21 | 98 |
blood island | 7.79e-21 | 98 |
hemolymphoid system | 8.20e-19 | 108 |
blood | 6.84e-14 | 15 |
haemolymphatic fluid | 6.84e-14 | 15 |
organism substance | 6.84e-14 | 15 |
connective tissue | 4.47e-12 | 371 |
immune system | 1.86e-10 | 93 |
bone marrow | 2.28e-08 | 76 |
hemopoietic organ | 5.37e-07 | 7 |
immune organ | 5.37e-07 | 7 |
bone element | 6.67e-07 | 82 |
lateral plate mesoderm | 7.86e-07 | 203 |