FFCP PHASE1:Hg19::chr2:16081912..16081931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_uc010yjr.1_5end | |association_with_transcript=-114bp_to_uc010yjr.1_5end | ||
|cluster_id=chr2:16081912..16081931,+ | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_2_at_MYCN_5end | |description=CAGE_peak_2_at_MYCN_5end | ||
|id=chr2:16081912..16081931,+ | |id=chr2:16081912..16081931,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.13e-10!7;CL:0000586!4.13e-10!7;CL:0000047!4.28e-10!8;CL:0000540!3.49e-08!6;CL:0000031!3.49e-08!6;CL:0000404!3.49e-08!6;CL:0002322!9.42e-08!5 | |ontology_enrichment_celltype=CL:0000039!4.13e-10!7;CL:0000586!4.13e-10!7;CL:0000047!4.28e-10!8;CL:0000540!3.49e-08!6;CL:0000031!3.49e-08!6;CL:0000404!3.49e-08!6;CL:0002322!9.42e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.21e-22;7!CL:0000586;7.21e-22;7!CL:0002322;2.58e-16;5!CL:0002321;7.52e-13;15!CL:0000540;1.22e-12;6!CL:0000404;1.22e-12;6!CL:0002319;2.20e-07;25!CL:0002563;4.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.82e-22,7;CL:0000586,6.82e-22,7;CL:0000047,2.57e-17,8;CL:0002322,2.76e-16,5;CL:0000540,8.79e-13,6;CL:0000031,8.79e-13,6;CL:0000404,8.79e-13,6;CL:0000133,7.41e-08,59;CL:0002319,2.28e-07,25;CL:0002563,5.09e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;1.22e-12;6!UBERON:0009117;5.54e-11;10!UBERON:0005564;5.54e-11;10 | |||
|ontology_enrichment_disease=DOID:3095!2.44e-12!22;DOID:2994!2.44e-12!22 | |ontology_enrichment_disease=DOID:3095!2.44e-12!22;DOID:2994!2.44e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.77e-22;22!DOID:2994;7.77e-22;22!DOID:169;7.86e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.69e-22,22;DOID:2994,7.69e-22,22;DOID:169,7.96e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.54e-21!94;UBERON:0001016!7.54e-21!94;UBERON:0005743!1.13e-20!86;UBERON:0001017!2.93e-20!82;UBERON:0001049!1.99e-14!57;UBERON:0005068!1.99e-14!57;UBERON:0006241!1.99e-14!57;UBERON:0007135!1.99e-14!57;UBERON:0002346!6.70e-14!90;UBERON:0003075!1.89e-13!86;UBERON:0007284!1.89e-13!86;UBERON:0000955!1.82e-12!69;UBERON:0006238!1.82e-12!69;UBERON:0002616!2.29e-12!59;UBERON:0000924!7.78e-12!173;UBERON:0006601!7.78e-12!173;UBERON:0001893!1.81e-11!34;UBERON:0004121!2.28e-11!169;UBERON:0002020!3.53e-11!34;UBERON:0003528!3.53e-11!34;UBERON:0002791!6.25e-11!33;UBERON:0002780!1.66e-10!41;UBERON:0001890!1.66e-10!41;UBERON:0006240!1.66e-10!41;UBERON:0001869!4.00e-10!32;UBERON:0003080!4.35e-10!42;UBERON:0007023!2.11e-09!115;UBERON:0003056!2.93e-09!61;UBERON:0000956!1.26e-08!25;UBERON:0000203!1.26e-08!25;UBERON:0000153!2.95e-07!129;UBERON:0007811!2.95e-07!129 | |ontology_enrichment_uberon=UBERON:0000073!7.54e-21!94;UBERON:0001016!7.54e-21!94;UBERON:0005743!1.13e-20!86;UBERON:0001017!2.93e-20!82;UBERON:0001049!1.99e-14!57;UBERON:0005068!1.99e-14!57;UBERON:0006241!1.99e-14!57;UBERON:0007135!1.99e-14!57;UBERON:0002346!6.70e-14!90;UBERON:0003075!1.89e-13!86;UBERON:0007284!1.89e-13!86;UBERON:0000955!1.82e-12!69;UBERON:0006238!1.82e-12!69;UBERON:0002616!2.29e-12!59;UBERON:0000924!7.78e-12!173;UBERON:0006601!7.78e-12!173;UBERON:0001893!1.81e-11!34;UBERON:0004121!2.28e-11!169;UBERON:0002020!3.53e-11!34;UBERON:0003528!3.53e-11!34;UBERON:0002791!6.25e-11!33;UBERON:0002780!1.66e-10!41;UBERON:0001890!1.66e-10!41;UBERON:0006240!1.66e-10!41;UBERON:0001869!4.00e-10!32;UBERON:0003080!4.35e-10!42;UBERON:0007023!2.11e-09!115;UBERON:0003056!2.93e-09!61;UBERON:0000956!1.26e-08!25;UBERON:0000203!1.26e-08!25;UBERON:0000153!2.95e-07!129;UBERON:0007811!2.95e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.37e-08;49!UBERON:0001242;4.72e-07;4!UBERON:0001262;4.72e-07;4!UBERON:0004786;4.72e-07;4!UBERON:0004808;4.72e-07;4!UBERON:0001277;4.72e-07;4!UBERON:0000473;9.13e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.09e-07,4;UBERON:0001262,5.09e-07,4;UBERON:0004786,5.09e-07,4;UBERON:0004808,5.09e-07,4;UBERON:0001277,5.09e-07,4;UBERON:0000473,9.01e-07,8 | |||
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| ||
|short_description=p2@MYCN | |short_description=p2@MYCN | ||
}} | }} |
Latest revision as of 19:23, 17 September 2015
Short description: | p2@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -114bp_to_uc010yjr.1_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.82e-22 | 7 |
germ cell | 6.82e-22 | 7 |
neuronal stem cell | 2.57e-17 | 8 |
embryonic stem cell | 2.76e-16 | 5 |
neuron | 8.79e-13 | 6 |
neuroblast | 8.79e-13 | 6 |
electrically signaling cell | 8.79e-13 | 6 |
neurectodermal cell | 7.41e-08 | 59 |
neural cell | 2.28e-07 | 25 |
intestinal epithelial cell | 5.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.09e-07 | 4 |
wall of intestine | 5.09e-07 | 4 |
gastrointestinal system mucosa | 5.09e-07 | 4 |
gastrointestinal system epithelium | 5.09e-07 | 4 |
intestinal epithelium | 5.09e-07 | 4 |
testis | 9.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.69e-22 | 22 |
germ cell cancer | 7.69e-22 | 22 |
neuroendocrine tumor | 7.96e-09 | 6 |