FFCP PHASE1:Hg19::chr2:153382151..153382161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:153382151..153382161,+ | |||
|coexpression_cluster_id=C1594 | |coexpression_cluster_id=C1594 | ||
|description=CAGE_peak_at_chr2:153382151..153382161,+ | |description=CAGE_peak_at_chr2:153382151..153382161,+ | ||
|id=chr2:153382151..153382161,+ | |id=chr2:153382151..153382161,+ | ||
|ontology_enrichment_celltype=CL:0002573!2.41e-11!2 | |ontology_enrichment_celltype=CL:0002573!2.41e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0002573;6.51e-34;2!CL:0000054;1.37e-13;2!CL:0000137;1.37e-13;2!CL:0000092;1.37e-13;2!CL:0000083;1.92e-07;4!CL:0000243;8.34e-07;15!CL:0000125;8.34e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,6.51e-34,2;CL:0000054,1.55e-13,2;CL:0000137,1.55e-13,2;CL:0000092,1.55e-13,2;CL:0000083,1.92e-07,4;CL:0000243,8.34e-07,15;CL:0000125,8.34e-07,15;CL:0000030,8.34e-07,15;CL:0000339,8.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.34e-07;15 | |||
|ontology_enrichment_disease=DOID:0060085!5.28e-09!1;DOID:3165!5.28e-09!1;DOID:0060121!5.28e-09!1;DOID:2438!5.28e-09!1;DOID:4418!5.28e-09!1;DOID:5662!1.42e-08!1 | |ontology_enrichment_disease=DOID:0060085!5.28e-09!1;DOID:3165!5.28e-09!1;DOID:0060121!5.28e-09!1;DOID:2438!5.28e-09!1;DOID:4418!5.28e-09!1;DOID:5662!1.42e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;9.79e-26;1!DOID:3165;9.79e-26;1!DOID:0060121;9.79e-26;1!DOID:2438;9.79e-26;1!DOID:4418;9.79e-26;1!DOID:4074;1.37e-13;2!DOID:4905;1.37e-13;2!DOID:200;1.37e-13;2!DOID:4305;1.37e-13;2!DOID:3498;1.37e-13;2!DOID:0060072;1.92e-07;4!DOID:1793;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.26e-25,1;DOID:3165,1.26e-25,1;DOID:0060121,1.26e-25,1;DOID:2438,1.26e-25,1;DOID:4418,1.26e-25,1;DOID:4074,1.37e-13,2;DOID:4905,1.37e-13,2;DOID:3498,1.37e-13,2;DOID:200,1.55e-13,2;DOID:4305,1.55e-13,2;DOID:1793,1.92e-07,4;DOID:0060072,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001264!3.04e-19!10;UBERON:0003922!3.04e-19!10;UBERON:0003923!3.04e-19!10;UBERON:0003924!3.04e-19!10;UBERON:0003921!3.04e-19!10;UBERON:0001045!1.76e-17!11;UBERON:0002114!9.10e-15!12;UBERON:0002108!8.97e-13!14;UBERON:0002075!1.31e-10!18;UBERON:0004458!7.90e-09!49;UBERON:0002146!9.74e-09!1;UBERON:0005623!9.74e-09!1;UBERON:0002119!2.23e-08!4;UBERON:0004531!2.23e-08!4;UBERON:0002323!2.45e-07!46;UBERON:0000160!9.82e-07!27 | |ontology_enrichment_uberon=UBERON:0001264!3.04e-19!10;UBERON:0003922!3.04e-19!10;UBERON:0003923!3.04e-19!10;UBERON:0003924!3.04e-19!10;UBERON:0003921!3.04e-19!10;UBERON:0001045!1.76e-17!11;UBERON:0002114!9.10e-15!12;UBERON:0002108!8.97e-13!14;UBERON:0002075!1.31e-10!18;UBERON:0004458!7.90e-09!49;UBERON:0002146!9.74e-09!1;UBERON:0005623!9.74e-09!1;UBERON:0002119!2.23e-08!4;UBERON:0004531!2.23e-08!4;UBERON:0002323!2.45e-07!46;UBERON:0000160!9.82e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;5.25e-40;10!UBERON:0002075;1.63e-22;18!UBERON:0000010;4.94e-12;8!UBERON:0002323;4.60e-10;45!UBERON:0000949;3.37e-09;43!UBERON:0002553;1.28e-08;52!UBERON:0004458;3.30e-08;48!UBERON:0000014;1.92e-07;4!UBERON:0002119;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,5.25e-40,10;UBERON:0002075,1.63e-22,18;UBERON:0002323,9.48e-14,46;UBERON:0004458,6.33e-13,49;UBERON:0000010,4.94e-12,8;UBERON:0003886,9.42e-12,54;UBERON:0002553,1.98e-10,61;UBERON:0000949,2.71e-09,45;UBERON:0002119,1.80e-07,4;UBERON:0000014,2.04e-07,4 | |||
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|short_description=p@chr2:153382151..153382161,+ | |short_description=p@chr2:153382151..153382161,+ | ||
}} | }} |
Latest revision as of 01:28, 29 July 2015
Short description: | p@chr2:153382151..153382161, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:153382151..153382161, + |
Coexpression cluster: | C1594_embryonic_cervical_keratoacanthoma_choriocarcinoma_brain_Osteoblast_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 6.51e-34 | 2 |
bone matrix secreting cell | 1.55e-13 | 2 |
osteocyte | 1.55e-13 | 2 |
osteoclast | 1.55e-13 | 2 |
epithelial cell of pancreas | 1.92e-07 | 4 |
glial cell (sensu Vertebrata) | 8.34e-07 | 15 |
glial cell | 8.34e-07 | 15 |
glioblast | 8.34e-07 | 15 |
glioblast (sensu Vertebrata) | 8.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pancreas | 5.25e-40 | 10 |
viscus | 1.63e-22 | 18 |
body cavity | 9.48e-14 | 46 |
body cavity or lining | 6.33e-13 | 49 |
peripheral nervous system | 4.94e-12 | 8 |
body cavity precursor | 9.42e-12 | 54 |
anatomical cavity | 1.98e-10 | 61 |
endocrine system | 2.71e-09 | 45 |
left ovary | 1.80e-07 | 4 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.26e-25 | 1 |
skin benign neoplasm | 1.26e-25 | 1 |
integumentary system benign neoplasm | 1.26e-25 | 1 |
dermis tumor | 1.26e-25 | 1 |
cutaneous fibrous histiocytoma | 1.26e-25 | 1 |
pancreas adenocarcinoma | 1.37e-13 | 2 |
pancreatic carcinoma | 1.37e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.37e-13 | 2 |
giant cell tumor | 1.55e-13 | 2 |
bone giant cell tumor | 1.55e-13 | 2 |
pancreatic cancer | 1.92e-07 | 4 |
benign neoplasm | 2.04e-07 | 4 |