FFCP PHASE1:Hg19::chr22:37640254..37640276,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5880 | |EntrezGene=5880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9802 | |HGNC=9802 | ||
|TSSclassifier=strong | |||
|UniProt=B1AH79 | |UniProt=B1AH79 | ||
|association_with_transcript=11bp_to_ENST00000401529_5end | |association_with_transcript=11bp_to_ENST00000401529_5end | ||
|cluster_id=chr22:37640254..37640276,- | |||
|coexpression_cluster_id=C4097 | |coexpression_cluster_id=C4097 | ||
|description=CAGE_peak_3_at_RAC2_5end | |description=CAGE_peak_3_at_RAC2_5end | ||
|id=chr22:37640254..37640276,- | |id=chr22:37640254..37640276,- | ||
|ontology_enrichment_celltype=CL:0000037!1.13e-56!172;CL:0000566!1.13e-56!172;CL:0000988!9.34e-55!182;CL:0002032!2.70e-53!165;CL:0000837!2.70e-53!165;CL:0000738!1.88e-45!140;CL:0002031!1.58e-39!124;CL:0002087!6.94e-39!119;CL:0000763!1.22e-30!112;CL:0000049!1.22e-30!112;CL:0000766!2.74e-24!76;CL:0000542!3.95e-20!53;CL:0000051!3.95e-20!53;CL:0000838!6.34e-20!52;CL:0000839!1.04e-19!70;CL:0000557!2.02e-19!71;CL:0002194!4.85e-17!63;CL:0000576!4.85e-17!63;CL:0000040!4.85e-17!63;CL:0000559!4.85e-17!63;CL:0000048!1.09e-16!430;CL:0002057!1.84e-16!42;CL:0002009!2.03e-16!65;CL:0000723!2.40e-16!436;CL:0000034!1.74e-15!444;CL:0000134!2.84e-15!358;CL:0002320!2.00e-14!365;CL:0000860!2.79e-13!45;CL:0002371!6.50e-12!591;CL:0000084!5.43e-11!25;CL:0000827!5.43e-11!25;CL:0002139!5.14e-10!24;CL:0000115!7.58e-10!35;CL:0000945!2.08e-09!24;CL:0000826!2.08e-09!24;CL:0000791!4.80e-09!18;CL:0000789!4.80e-09!18;CL:0002420!4.80e-09!18;CL:0002419!4.80e-09!18;CL:0000790!4.80e-09!18;CL:0000219!3.50e-08!390;CL:0000144!4.53e-08!625;CL:0000071!9.44e-08!18;CL:0002546!9.44e-08!18;CL:0000003!3.59e-07!722;CL:0000236!3.95e-07!14;CL:0002078!7.49e-07!44 | |ontology_enrichment_celltype=CL:0000037!1.13e-56!172;CL:0000566!1.13e-56!172;CL:0000988!9.34e-55!182;CL:0002032!2.70e-53!165;CL:0000837!2.70e-53!165;CL:0000738!1.88e-45!140;CL:0002031!1.58e-39!124;CL:0002087!6.94e-39!119;CL:0000763!1.22e-30!112;CL:0000049!1.22e-30!112;CL:0000766!2.74e-24!76;CL:0000542!3.95e-20!53;CL:0000051!3.95e-20!53;CL:0000838!6.34e-20!52;CL:0000839!1.04e-19!70;CL:0000557!2.02e-19!71;CL:0002194!4.85e-17!63;CL:0000576!4.85e-17!63;CL:0000040!4.85e-17!63;CL:0000559!4.85e-17!63;CL:0000048!1.09e-16!430;CL:0002057!1.84e-16!42;CL:0002009!2.03e-16!65;CL:0000723!2.40e-16!436;CL:0000034!1.74e-15!444;CL:0000134!2.84e-15!358;CL:0002320!2.00e-14!365;CL:0000860!2.79e-13!45;CL:0002371!6.50e-12!591;CL:0000084!5.43e-11!25;CL:0000827!5.43e-11!25;CL:0002139!5.14e-10!24;CL:0000115!7.58e-10!35;CL:0000945!2.08e-09!24;CL:0000826!2.08e-09!24;CL:0000791!4.80e-09!18;CL:0000789!4.80e-09!18;CL:0002420!4.80e-09!18;CL:0002419!4.80e-09!18;CL:0000790!4.80e-09!18;CL:0000219!3.50e-08!390;CL:0000144!4.53e-08!625;CL:0000071!9.44e-08!18;CL:0002546!9.44e-08!18;CL:0000003!3.59e-07!722;CL:0000236!3.95e-07!14;CL:0002078!7.49e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.85e-12;53!CL:0000766;2.41e-12;69!CL:0000473;6.47e-12;39!CL:0000234;6.47e-12;39!CL:0000860;2.21e-11;33!CL:0002057;2.21e-11;33!CL:0002087;2.40e-11;104!CL:0000763;2.68e-11;100!CL:0000084;3.80e-11;25!CL:0000738;7.08e-11;136!CL:0000576;9.02e-11;48!CL:0000988;2.60e-10;177!CL:0002139;3.61e-10;24!CL:0000945;1.57e-09;24!CL:0000791;3.67e-09;18!CL:0000789;3.67e-09;18!CL:0002419;3.67e-09;18!CL:0000115;6.27e-09;36!CL:0000071;7.29e-08;18!CL:0000236;4.18e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.19e-61,168;CL:0000988,2.80e-58,177;CL:0002032,1.82e-57,161;CL:0000837,1.82e-57,161;CL:0000738,1.57e-49,136;CL:0002031,1.26e-43,120;CL:0002087,4.91e-43,115;CL:0000763,3.93e-34,108;CL:0000049,3.93e-34,108;CL:0000766,3.42e-28,72;CL:0000839,3.03e-23,66;CL:0000557,6.88e-23,67;CL:0002194,1.89e-20,59;CL:0000576,1.89e-20,59;CL:0000040,1.89e-20,59;CL:0000559,1.89e-20,59;CL:0000542,2.07e-20,53;CL:0000051,2.07e-20,53;CL:0000838,3.35e-20,52;CL:0002009,1.14e-19,61;CL:0000473,2.47e-19,48;CL:0000234,2.47e-19,48;CL:0000048,6.48e-17,427;CL:0000860,1.10e-16,42;CL:0002057,1.10e-16,42;CL:0000723,1.16e-16,433;CL:0000034,7.06e-16,441;CL:0000134,9.34e-16,354;CL:0002320,8.00e-15,361;CL:0000084,3.92e-11,25;CL:0000827,3.92e-11,25;CL:0000115,2.38e-10,36;CL:0002139,3.83e-10,24;CL:0000945,1.59e-09,24;CL:0000826,1.59e-09,24;CL:0000791,3.70e-09,18;CL:0000789,3.70e-09,18;CL:0002420,3.70e-09,18;CL:0002419,3.70e-09,18;CL:0000790,3.70e-09,18;CL:0000219,9.74e-09,386;CL:0000071,7.61e-08,18;CL:0002546,7.61e-08,18;CL:0000236,3.25e-07,14;CL:0002078,3.62e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000051;1.85e-12;53!CL:0002057;2.71e-12;42!CL:0000049;5.47e-10;108!CL:0000790;3.67e-09;18!CL:0002546;7.29e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!5.71e-14!51;DOID:0060083!5.71e-14!51;DOID:1240!3.74e-12!39;DOID:8692!4.21e-10!31 | |ontology_enrichment_disease=DOID:2531!5.71e-14!51;DOID:0060083!5.71e-14!51;DOID:1240!3.74e-12!39;DOID:8692!4.21e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.56e-10;31!DOID:1240;1.17e-09;39!DOID:2531;5.59e-09;51!DOID:0060083;5.59e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.72e-14,51;DOID:0060083,3.72e-14,51;DOID:1240,2.59e-12,39;DOID:8692,3.13e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.68e-32!112;UBERON:0003081!2.52e-30!216;UBERON:0002390!4.53e-28!102;UBERON:0003061!4.53e-28!102;UBERON:0002371!1.37e-18!80;UBERON:0002405!1.74e-18!115;UBERON:0001474!1.07e-14!86;UBERON:0004535!3.62e-14!110;UBERON:0001009!1.31e-13!113;UBERON:0002384!2.08e-13!375;UBERON:0000055!3.63e-12!69;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!1.49e-09!167;UBERON:0001981!2.18e-09!60;UBERON:0007500!2.18e-09!60;UBERON:0004537!2.18e-09!60;UBERON:0006965!2.18e-09!60;UBERON:0004872!4.35e-09!84;UBERON:0002049!6.72e-09!79;UBERON:0007798!6.72e-09!79;UBERON:0000178!4.11e-08!15;UBERON:0000179!4.11e-08!15;UBERON:0000463!4.11e-08!15;UBERON:0001986!9.44e-08!18;UBERON:0004638!9.44e-08!18;UBERON:0004852!9.44e-08!18;UBERON:0001637!1.56e-07!42;UBERON:0003509!1.56e-07!42;UBERON:0004572!1.56e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!4.68e-32!112;UBERON:0003081!2.52e-30!216;UBERON:0002390!4.53e-28!102;UBERON:0003061!4.53e-28!102;UBERON:0002371!1.37e-18!80;UBERON:0002405!1.74e-18!115;UBERON:0001474!1.07e-14!86;UBERON:0004535!3.62e-14!110;UBERON:0001009!1.31e-13!113;UBERON:0002384!2.08e-13!375;UBERON:0000055!3.63e-12!69;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!1.49e-09!167;UBERON:0001981!2.18e-09!60;UBERON:0007500!2.18e-09!60;UBERON:0004537!2.18e-09!60;UBERON:0006965!2.18e-09!60;UBERON:0004872!4.35e-09!84;UBERON:0002049!6.72e-09!79;UBERON:0007798!6.72e-09!79;UBERON:0000178!4.11e-08!15;UBERON:0000179!4.11e-08!15;UBERON:0000463!4.11e-08!15;UBERON:0001986!9.44e-08!18;UBERON:0004638!9.44e-08!18;UBERON:0004852!9.44e-08!18;UBERON:0001637!1.56e-07!42;UBERON:0003509!1.56e-07!42;UBERON:0004572!1.56e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002193;1.25e-08;42!UBERON:0000178;3.16e-08;15!UBERON:0000179;3.16e-08;15!UBERON:0000463;3.16e-08;15!UBERON:0004638;7.29e-08;18!UBERON:0001986;7.29e-08;18!UBERON:0004852;7.29e-08;18!UBERON:0002390;1.65e-07;32!UBERON:0000055;2.55e-07;65 | |||
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| ||
|short_description=p3@RAC2 | |short_description=p3@RAC2 | ||
}} | }} |
Latest revision as of 04:46, 20 September 2015
Short description: | p3@RAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAC2_5end |
Coexpression cluster: | C4097_Neutrophils_Mast_Eosinophils_Macrophage_CD4_acute_Whole |
Association with transcript: | 11bp_to_ENST00000401529_5end |
EntrezGene: | RAC2 |
HGNC: | 9802 |
UniProt: | B1AH79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.45e-35 | 108 |
lateral plate mesoderm | 1.25e-33 | 203 |
hematopoietic system | 1.93e-31 | 98 |
blood island | 1.93e-31 | 98 |
immune system | 3.19e-28 | 93 |
bone marrow | 1.73e-21 | 76 |
bone element | 1.87e-17 | 82 |
skeletal element | 1.15e-15 | 90 |
cardiovascular system | 5.58e-14 | 109 |
connective tissue | 7.64e-14 | 371 |
mesoderm | 1.99e-13 | 315 |
mesoderm-derived structure | 1.99e-13 | 315 |
presumptive mesoderm | 1.99e-13 | 315 |
circulatory system | 2.01e-13 | 112 |
vessel | 2.95e-12 | 68 |
skeletal system | 3.31e-11 | 100 |
musculoskeletal system | 1.82e-09 | 167 |
epithelial tube open at both ends | 1.97e-09 | 59 |
blood vessel | 1.97e-09 | 59 |
blood vasculature | 1.97e-09 | 59 |
vascular cord | 1.97e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 5.00e-09 | 83 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
blood | 3.27e-08 | 15 |
haemolymphatic fluid | 3.27e-08 | 15 |
organism substance | 3.27e-08 | 15 |
blood vessel endothelium | 7.61e-08 | 18 |
endothelium | 7.61e-08 | 18 |
cardiovascular system endothelium | 7.61e-08 | 18 |
artery | 1.26e-07 | 42 |
arterial blood vessel | 1.26e-07 | 42 |
arterial system | 1.26e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.72e-14 | 51 |
immune system cancer | 3.72e-14 | 51 |
leukemia | 2.59e-12 | 39 |
myeloid leukemia | 3.13e-10 | 31 |